RNA–Protein interactions for RNA: ENST00000217133.1

TUBB1-201, Transcript of tubulin beta 1 class VI, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB1, Length 3,496 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1-201ENST00000217133 PYGBP11216 843 aa10.13□□□□□ -0.79
TUBB1-201ENST00000217133 CRKP46108 304 aa10.13□□□□□ -0.79
TUBB1-201ENST00000217133 CDK7P50613 346 aa10.13□□□□□ -0.79
TUBB1-201ENST00000217133 RAP1GDS1P52306 607 aa10.13□□□□□ -0.79
TUBB1-201ENST00000217133 BASP1P80723 227 aaKnown RBP10.13□□□□□ -0.79
TUBB1-201ENST00000217133 DNAL1Q4LDG9 190 aa10.13□□□□□ -0.79
TUBB1-201ENST00000217133 TRIM72Q6ZMU5 477 aa10.13□□□□□ -0.79
TUBB1-201ENST00000217133 NET1Q7Z628 596 aaPredicted RBP10.13□□□□□ -0.79
TUBB1-201ENST00000217133 PRPF39Q86UA1 669 aaKnown RBP10.13□□□□□ -0.79
TUBB1-201ENST00000217133 NIM1KQ8IY84 436 aa10.13□□□□□ -0.79
TUBB1-201ENST00000217133 PHACTR1Q9C0D0 580 aa10.13□□□□□ -0.79
TUBB1-201ENST00000217133 G3BP2Q9UN86 482 aaKnown RBP10.13□□□□□ -0.79
TUBB1-201ENST00000217133 COL4A5P29400 1685 aa10.12□□□□□ -0.79
TUBB1-201ENST00000217133 CCDC195A0A1B0GUA6 201 aa10.12□□□□□ -0.79
TUBB1-201ENST00000217133 TCF4P15884 667 aa10.12□□□□□ -0.79
TUBB1-201ENST00000217133 YWHABP31946 246 aaKnown RBP10.12□□□□□ -0.79
TUBB1-201ENST00000217133 ALDH18A1P54886 795 aaKnown RBP10.12□□□□□ -0.79
TUBB1-201ENST00000217133 SH3BGRP55822 239 aaPredicted RBP10.12□□□□□ -0.79
TUBB1-201ENST00000217133 CYP24A1Q07973 514 aa10.12□□□□□ -0.79
TUBB1-201ENST00000217133 CDC16Q13042 620 aa10.12□□□□□ -0.79
TUBB1-201ENST00000217133 MED21Q13503 144 aa10.12□□□□□ -0.79
TUBB1-201ENST00000217133 PRKD1Q15139 912 aaPredicted RBP10.12□□□□□ -0.79
TUBB1-201ENST00000217133 FNBP1LQ5T0N5 605 aa10.12□□□□□ -0.79
TUBB1-201ENST00000217133 ANKRD22Q5VYY1 191 aa10.12□□□□□ -0.79
TUBB1-201ENST00000217133 CIAPIN1Q6FI81 312 aa10.12□□□□□ -0.79
TUBB1-201ENST00000217133 HHIPL2Q6UWX4 724 aa10.12□□□□□ -0.79
TUBB1-201ENST00000217133 MARK2Q7KZI7 788 aaKnown RBP10.12□□□□□ -0.79
TUBB1-201ENST00000217133 ULK2Q8IYT8 1036 aa10.12□□□□□ -0.79
TUBB1-201ENST00000217133 ITFG2Q969R8 447 aa10.12□□□□□ -0.79
TUBB1-201ENST00000217133 APOPT1Q96IL0 206 aa10.12□□□□□ -0.79
TUBB1-201ENST00000217133 HIC2Q96JB3 615 aa10.12□□□□□ -0.79
TUBB1-201ENST00000217133 ACAP3Q96P50 834 aa10.12□□□□□ -0.79
TUBB1-201ENST00000217133 WWP1Q9H0M0 922 aa10.12□□□□□ -0.79
TUBB1-201ENST00000217133 KCNK13Q9HB14 408 aa10.12□□□□□ -0.79
TUBB1-201ENST00000217133 IL1RAPL1Q9NZN1 696 aa10.12□□□□□ -0.79
TUBB1-201ENST00000217133 CLRN2A0PK11 232 aa10.12□□□□□ -0.79
TUBB1-201ENST00000217133 CFHP08603 1231 aa10.12□□□□□ -0.79
TUBB1-201ENST00000217133 ECE1P42892 770 aa10.12□□□□□ -0.79
TUBB1-201ENST00000217133 RPL7AP62424 266 aaKnown RBP10.12□□□□□ -0.79
TUBB1-201ENST00000217133 FAAP100Q0VG06 881 aa10.12□□□□□ -0.79
TUBB1-201ENST00000217133 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.12□□□□□ -0.79
TUBB1-201ENST00000217133 CC2D2BQ6DHV5 1058 aa10.12□□□□□ -0.79
TUBB1-201ENST00000217133 SPOPLQ6IQ16 392 aa10.12□□□□□ -0.79
TUBB1-201ENST00000217133 DNAJC24Q6P3W2 148 aa10.12□□□□□ -0.79
TUBB1-201ENST00000217133 DRICH1Q6PGQ1 229 aaPredicted RBP10.12□□□□□ -0.79
TUBB1-201ENST00000217133 FAM210AQ96ND0 272 aa10.12□□□□□ -0.79
TUBB1-201ENST00000217133 MXRA8Q9BRK3 442 aa10.12□□□□□ -0.79
TUBB1-201ENST00000217133 SMYD3Q9H7B4 428 aa10.12□□□□□ -0.79
TUBB1-201ENST00000217133 SAE1Q9UBE0 346 aaPredicted RBP10.12□□□□□ -0.79
TUBB1-201ENST00000217133 TAGLN3Q9UI15 199 aa10.12□□□□□ -0.79
TUBB1-201ENST00000217133 COMMD3-BMI1R4GMX3 469 aa10.12□□□□□ -0.79
TUBB1-201ENST00000217133 CCDC160A6NGH7 325 aa10.12□□□□□ -0.79
TUBB1-201ENST00000217133 TM7SF2O76062 418 aa10.12□□□□□ -0.79
TUBB1-201ENST00000217133 CYP1A1P04798 512 aaPredicted RBP10.12□□□□□ -0.79
TUBB1-201ENST00000217133 GTF2H1P32780 548 aa10.12□□□□□ -0.79
TUBB1-201ENST00000217133 PSMC4P43686 418 aa10.12□□□□□ -0.79
TUBB1-201ENST00000217133 NOMO3P69849 1222 aa10.12□□□□□ -0.79
TUBB1-201ENST00000217133 TBC1D25Q3MII6 688 aa10.12□□□□□ -0.79
TUBB1-201ENST00000217133 MSS51Q4VC12 460 aa10.12□□□□□ -0.79
TUBB1-201ENST00000217133 TFDP3Q5H9I0 405 aa10.12□□□□□ -0.79
TUBB1-201ENST00000217133 CHSY1Q86X52 802 aa10.12□□□□□ -0.79
TUBB1-201ENST00000217133 TRIM42Q8IWZ5 723 aa10.12□□□□□ -0.79
TUBB1-201ENST00000217133 ABRAQ8N0Z2 381 aa10.12□□□□□ -0.79
TUBB1-201ENST00000217133 PPP1R14CQ8TAE6 165 aa10.12□□□□□ -0.79
TUBB1-201ENST00000217133 MCEEQ96PE7 176 aa10.12□□□□□ -0.79
TUBB1-201ENST00000217133 PANX3Q96QZ0 392 aa10.12□□□□□ -0.79
TUBB1-201ENST00000217133 CCDC28BQ9BUN5 200 aa10.12□□□□□ -0.79
TUBB1-201ENST00000217133 MIS12Q9H081 205 aa10.12□□□□□ -0.79
TUBB1-201ENST00000217133 TDRD3Q9H7E2 651 aaKnown RBP10.12□□□□□ -0.79
TUBB1-201ENST00000217133 KCNH7Q9NS40 1196 aa10.12□□□□□ -0.79
TUBB1-201ENST00000217133 XPO7Q9UIA9 1087 aaKnown RBP10.12□□□□□ -0.79
TUBB1-201ENST00000217133 SLC4A7Q9Y6M7 1214 aa10.12□□□□□ -0.79
TUBB1-201ENST00000217133 HLA-DRAP01903 254 aa10.11□□□□□ -0.79
TUBB1-201ENST00000217133 VIL1P09327 827 aaKnown RBP10.11□□□□□ -0.79
TUBB1-201ENST00000217133 ACTR3P61158 418 aa10.11□□□□□ -0.79
TUBB1-201ENST00000217133 ZNF200P98182 395 aaPredicted RBP10.11□□□□□ -0.79
TUBB1-201ENST00000217133 ZYXQ15942 572 aaKnown RBP10.11□□□□□ -0.79
TUBB1-201ENST00000217133 STRIP1Q5VSL9 837 aa10.11□□□□□ -0.79
TUBB1-201ENST00000217133 ATG16L1Q676U5 607 aa10.11□□□□□ -0.79
TUBB1-201ENST00000217133 PLA2G4FQ68DD2 849 aa10.11□□□□□ -0.79
TUBB1-201ENST00000217133 PLEKHA7Q6IQ23 1121 aa10.11□□□□□ -0.79
TUBB1-201ENST00000217133 TREML1Q86YW5 311 aa10.11□□□□□ -0.79
TUBB1-201ENST00000217133 GPD1LQ8N335 351 aa10.11□□□□□ -0.79
TUBB1-201ENST00000217133 ZNF276Q8N554 614 aa10.11□□□□□ -0.79
TUBB1-201ENST00000217133 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.11□□□□□ -0.79
TUBB1-201ENST00000217133 FBXO27Q8NI29 283 aa10.11□□□□□ -0.79
TUBB1-201ENST00000217133 DCAKDQ8WVC6 231 aa10.11□□□□□ -0.79
TUBB1-201ENST00000217133 KCNK4Q9NYG8 393 aa10.11□□□□□ -0.79
TUBB1-201ENST00000217133 FETUBQ9UGM5 382 aa10.11□□□□□ -0.79
TUBB1-201ENST00000217133 SLC7A8Q9UHI5 535 aa10.11□□□□□ -0.79
TUBB1-201ENST00000217133 PPM1HQ9ULR3 514 aa10.11□□□□□ -0.79
TUBB1-201ENST00000217133 CDK5RAP2Q96SN8 1893 aa10.11□□□□□ -0.79
TUBB1-201ENST00000217133 F8VP50 259 aa10.11□□□□□ -0.79
TUBB1-201ENST00000217133 ZC3H11AO75152 810 aaKnown RBP eCLIP10.11□□□□□ -0.79
TUBB1-201ENST00000217133 ITGAVP06756 1048 aa10.11□□□□□ -0.79
TUBB1-201ENST00000217133 NPTX2P47972 431 aa10.11□□□□□ -0.79
TUBB1-201ENST00000217133 EPHB1P54762 984 aa10.11□□□□□ -0.79
TUBB1-201ENST00000217133 AQP5P55064 265 aa10.11□□□□□ -0.79
TUBB1-201ENST00000217133 OTUD4Q01804 1114 aaKnown RBP10.11□□□□□ -0.79
TUBB1-201ENST00000217133 ASPHQ12797 758 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms