RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 SERHLQ9NQF3 203 aa6.3□□□□□ -1.4
VPS13D-201ENST00000011700 DTNAQ9Y4J8 743 aa6.3□□□□□ -1.4
VPS13D-201ENST00000011700 ARHGEF28Q8N1W1 1705 aaKnown RBP6.3□□□□□ -1.4
VPS13D-201ENST00000011700 ECM2O94769 699 aaPredicted RBP6.3□□□□□ -1.4
VPS13D-201ENST00000011700 MSH3P20585 1137 aa6.3□□□□□ -1.4
VPS13D-201ENST00000011700 POLD3Q15054 466 aaPredicted RBP6.3□□□□□ -1.4
VPS13D-201ENST00000011700 PTPRNQ16849 979 aa6.3□□□□□ -1.4
VPS13D-201ENST00000011700 EXD1Q8NHP7 514 aa6.3□□□□□ -1.4
VPS13D-201ENST00000011700 CYGBQ8WWM9 190 aa6.3□□□□□ -1.4
VPS13D-201ENST00000011700 COMMD8Q9NX08 183 aa6.3□□□□□ -1.4
VPS13D-201ENST00000011700 RBAKQ9NYW8 714 aaPredicted RBP6.3□□□□□ -1.4
VPS13D-201ENST00000011700 SCN9AQ15858 1988 aa6.3□□□□□ -1.4
VPS13D-201ENST00000011700 SMIM22K7EJ46 135 aa6.3□□□□□ -1.4
VPS13D-201ENST00000011700 CRTAMO95727 393 aa6.3□□□□□ -1.4
VPS13D-201ENST00000011700 GPD2P43304 727 aa6.3□□□□□ -1.4
VPS13D-201ENST00000011700 CYP4A11Q02928 519 aa6.3□□□□□ -1.4
VPS13D-201ENST00000011700 FCHO2Q0JRZ9 810 aa6.3□□□□□ -1.4
VPS13D-201ENST00000011700 LRRC74AQ0VAA2 488 aa6.3□□□□□ -1.4
VPS13D-201ENST00000011700 GSTA3Q16772 222 aa6.3□□□□□ -1.4
VPS13D-201ENST00000011700 CYP4A22Q5TCH4 519 aa6.3□□□□□ -1.4
VPS13D-201ENST00000011700 RMDN3Q96TC7 470 aa6.3□□□□□ -1.4
VPS13D-201ENST00000011700 ERP44Q9BS26 406 aa6.3□□□□□ -1.4
VPS13D-201ENST00000011700 WDR12Q9GZL7 423 aaKnown RBP6.3□□□□□ -1.4
VPS13D-201ENST00000011700 BHMT2Q9H2M3 363 aa6.3□□□□□ -1.4
VPS13D-201ENST00000011700 TMEM8AQ9HCN3 771 aa6.3□□□□□ -1.4
VPS13D-201ENST00000011700 LNPEPQ9UIQ6 1025 aa6.3□□□□□ -1.4
VPS13D-201ENST00000011700 PCDHA10Q9Y5I2 948 aa6.3□□□□□ -1.4
VPS13D-201ENST00000011700 DNAJA2O60884 412 aa6.3□□□□□ -1.4
VPS13D-201ENST00000011700 EGFRP00533 1210 aa6.3□□□□□ -1.4
VPS13D-201ENST00000011700 FAUP35544 74 aaKnown RBP6.3□□□□□ -1.4
VPS13D-201ENST00000011700 AP3S2P59780 193 aa6.3□□□□□ -1.4
VPS13D-201ENST00000011700 DGUOKQ16854 277 aa6.3□□□□□ -1.4
VPS13D-201ENST00000011700 KCNT1Q5JUK3 1230 aa6.3□□□□□ -1.4
VPS13D-201ENST00000011700 GADL1Q6ZQY3 521 aa6.3□□□□□ -1.4
VPS13D-201ENST00000011700 EID3Q8N140 333 aa6.3□□□□□ -1.4
VPS13D-201ENST00000011700 AMER2Q8N7J2 671 aa6.3□□□□□ -1.4
VPS13D-201ENST00000011700 SPATA18Q8TC71 538 aa6.3□□□□□ -1.4
VPS13D-201ENST00000011700 DNAJC7Q99615 494 aa6.3□□□□□ -1.4
VPS13D-201ENST00000011700 GJA3Q9Y6H8 435 aa6.3□□□□□ -1.4
VPS13D-201ENST00000011700 CCDC162PA2VCL2 907 aa6.3□□□□□ -1.4
VPS13D-201ENST00000011700 RRN3P2A6NIE6 340 aa6.3□□□□□ -1.4
VPS13D-201ENST00000011700 DPYSL4O14531 572 aa6.3□□□□□ -1.4
VPS13D-201ENST00000011700 ALOX5P09917 674 aa6.3□□□□□ -1.4
VPS13D-201ENST00000011700 ITGA2P17301 1181 aa6.3□□□□□ -1.4
VPS13D-201ENST00000011700 PMS1P54277 932 aaKnown RBP6.3□□□□□ -1.4
VPS13D-201ENST00000011700 TWF2Q6IBS0 349 aaKnown RBP6.3□□□□□ -1.4
VPS13D-201ENST00000011700 KDM7AQ6ZMT4 941 aa6.3□□□□□ -1.4
VPS13D-201ENST00000011700 RBBP8NLQ8NC74 664 aaPredicted RBP6.3□□□□□ -1.4
VPS13D-201ENST00000011700 NEU2Q9Y3R4 380 aa6.3□□□□□ -1.4
VPS13D-201ENST00000011700 PRPF4O43172 522 aaKnown RBP eCLIP6.3□□□□□ -1.4
VPS13D-201ENST00000011700 GLRA3O75311 464 aa6.3□□□□□ -1.4
VPS13D-201ENST00000011700 PHKA1P46020 1223 aa6.3□□□□□ -1.4
VPS13D-201ENST00000011700 CDH6P55285 790 aa6.3□□□□□ -1.4
VPS13D-201ENST00000011700 CCDC157Q569K6 752 aa6.3□□□□□ -1.4
VPS13D-201ENST00000011700 ANKS6Q68DC2 871 aa6.3□□□□□ -1.4
VPS13D-201ENST00000011700 SLC7A14Q8TBB6 771 aa6.3□□□□□ -1.4
VPS13D-201ENST00000011700 HEG1Q9ULI3 1381 aa6.3□□□□□ -1.4
VPS13D-201ENST00000011700 C19orf81C9J6K1 198 aa6.29□□□□□ -1.4
VPS13D-201ENST00000011700 MAPKAPK2P49137 400 aa6.29□□□□□ -1.4
VPS13D-201ENST00000011700 HARS2P49590 506 aaKnown RBP6.29□□□□□ -1.4
VPS13D-201ENST00000011700 RPS6KA3P51812 740 aa6.29□□□□□ -1.4
VPS13D-201ENST00000011700 SLC39A6Q13433 755 aa6.29□□□□□ -1.4
VPS13D-201ENST00000011700 C6orf10Q5SRN2 563 aa6.29□□□□□ -1.4
VPS13D-201ENST00000011700 ARMC4Q5T2S8 1044 aa6.29□□□□□ -1.4
VPS13D-201ENST00000011700 OR6B2Q6IFH4 312 aa6.29□□□□□ -1.4
VPS13D-201ENST00000011700 C7orf31Q8N865 590 aa6.29□□□□□ -1.4
VPS13D-201ENST00000011700 QRFPRQ96P65 431 aa6.29□□□□□ -1.4
VPS13D-201ENST00000011700 FTOQ9C0B1 505 aaKnown RBP eCLIP6.29□□□□□ -1.4
VPS13D-201ENST00000011700 CNOT7Q9UIV1 285 aaKnown RBP6.29□□□□□ -1.4
VPS13D-201ENST00000011700 SYNPO2Q9UMS6 1093 aa6.29□□□□□ -1.4
VPS13D-201ENST00000011700 CLCA2Q9UQC9 943 aa6.29□□□□□ -1.4
VPS13D-201ENST00000011700 HEY1Q9Y5J3 304 aa6.29□□□□□ -1.4
VPS13D-201ENST00000011700 TRPM6Q9BX84 2022 aa6.29□□□□□ -1.4
VPS13D-201ENST00000011700 CYP2D7A0A087X1C5 515 aa6.29□□□□□ -1.4
VPS13D-201ENST00000011700 GOLGA8SH3BPF8 625 aa6.29□□□□□ -1.4
VPS13D-201ENST00000011700 SKIV2L2P42285 1042 aaKnown RBP6.29□□□□□ -1.4
VPS13D-201ENST00000011700 CHRNDQ07001 517 aa6.29□□□□□ -1.4
VPS13D-201ENST00000011700 XRCC4Q13426 336 aa6.29□□□□□ -1.4
VPS13D-201ENST00000011700 ZMYND11Q15326 602 aa6.29□□□□□ -1.4
VPS13D-201ENST00000011700 SAMD4BQ5PRF9 694 aaKnown RBP6.29□□□□□ -1.4
VPS13D-201ENST00000011700 FAM102AQ5T9C2 384 aaPredicted RBP6.29□□□□□ -1.4
VPS13D-201ENST00000011700 MFSD14CQ5VZR4 134 aa6.29□□□□□ -1.4
VPS13D-201ENST00000011700 PLA2G4FQ68DD2 849 aa6.29□□□□□ -1.4
VPS13D-201ENST00000011700 KYAT3Q6YP21 454 aaKnown RBP6.29□□□□□ -1.4
VPS13D-201ENST00000011700 CATSPER4Q7RTX7 472 aa6.29□□□□□ -1.4
VPS13D-201ENST00000011700 TRMT2AQ8IZ69 625 aaKnown RBP6.29□□□□□ -1.4
VPS13D-201ENST00000011700 SUCLG2Q96I99 432 aa6.29□□□□□ -1.4
VPS13D-201ENST00000011700 VPS11Q9H270 941 aa6.29□□□□□ -1.4
VPS13D-201ENST00000011700 UNC45AQ9H3U1 944 aa6.29□□□□□ -1.4
VPS13D-201ENST00000011700 DMAP1Q9NPF5 467 aaPredicted RBP6.29□□□□□ -1.4
VPS13D-201ENST00000011700 LATS2Q9NRM7 1088 aa6.29□□□□□ -1.4
VPS13D-201ENST00000011700 PRMT7Q9NVM4 692 aaPredicted RBP6.29□□□□□ -1.4
VPS13D-201ENST00000011700 GMIPQ9P107 970 aa6.29□□□□□ -1.4
VPS13D-201ENST00000011700 RABL2AQ9UBK7 228 aaPredicted RBP6.29□□□□□ -1.4
VPS13D-201ENST00000011700 RABL2BQ9UNT1 228 aa6.29□□□□□ -1.4
VPS13D-201ENST00000011700 LZTS1Q9Y250 596 aa6.29□□□□□ -1.4
VPS13D-201ENST00000011700 CRB1P82279 1406 aa6.29□□□□□ -1.4
VPS13D-201ENST00000011700 PARP4Q9UKK3 1724 aaKnown RBP6.29□□□□□ -1.4
VPS13D-201ENST00000011700 A0A087WXM4 84 aa6.29□□□□□ -1.4
VPS13D-201ENST00000011700 POTECB2RU33 542 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms