RNA–Protein interactions for RNA: ENSMUST00000106035.7

Ccdc28b-202, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28b, Length 821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-202ENSMUST00000106035 Olfr8Q60892 310 aa12.99□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Tsg101Q61187 391 aa12.99□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Lrrn2Q6PHP6 730 aa12.99□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Luc7l2Q7TNC4 392 aaKnown RBP12.99□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Olfm2Q8BM13 448 aa12.99□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Csnk1g1Q8BTH8 459 aa12.99□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Abi3Q8BYZ1 367 aa12.99□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Slc9a9Q8BZ00 644 aa12.99□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Gsdmc3Q8CB12 480 aa12.99□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Rassf9Q8K342 435 aa12.99□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Slc5a9Q8VDT1 685 aa12.99□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Olfr1499Q8VG65 314 aa12.99□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Synpo2Q91YE8 1087 aaKnown RBP12.99□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Tubgcp2Q921G8 905 aa12.99□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 NamptQ99KQ4 491 aa12.99□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Marc1Q9CW42 340 aa12.99□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 H2-OaQ9QWV1 250 aa12.99□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Trpm6Q8CIR4 2028 aa12.98□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Zscan4-ps3A0A1B0GRH6 506 aa12.98□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Plekhg4A0A1L1SU27 1217 aa12.98□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Cisd3B1AR13 137 aa12.98□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Cfap58B2RW38 873 aa12.98□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Nxpe3B9EKK6 559 aa12.98□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Zfand4D3Z3C6 739 aa12.98□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 4930544D05RikJ3QK56 214 aa12.98□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Nedd9O35177 833 aa12.98□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Kifc3O35231 824 aa12.98□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Prl2c2P04095 224 aa12.98□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Fcgr2P08101 330 aa12.98□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Chrm1P12657 460 aa12.98□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Gjb3P28231 270 aa12.98□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 DctP29812 517 aa12.98□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Nub1P54729 614 aa12.98□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Usp46P62069 366 aa12.98□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Stim1P70302 685 aa12.98□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Adamts1P97857 968 aa12.98□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Upf3bQ3ULL6 472 aa12.98□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Ctc1Q5SUQ9 1212 aa12.98□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Smarcd1Q61466 515 aaKnown RBP12.98□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Dnajc1Q61712 552 aaKnown RBP12.98□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Adat2Q6P6J0 191 aa12.98□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Slitrk1Q810C1 696 aa12.98□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Adam29Q811Q4 763 aa12.98□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Q8CDN1 933 aa12.98□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Mill2Q8HWE5 355 aa12.98□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Hmgcll1Q8JZS7 343 aa12.98□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Bbs7Q8K2G4 715 aa12.98□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Nol6Q8R5K4 1152 aaKnown RBP12.98□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Rab3il1Q8VDV3 383 aa12.98□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Pcdha11Q91Y19 950 aa12.98□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Elmod3Q91YP6 381 aa12.98□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Q91Z58 1206 aa12.98□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Q922M7 232 aa12.98□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Card14Q99KF0 999 aa12.98□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 AdprmQ99KS6 340 aa12.98□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Necab3Q9D6J4 353 aa12.98□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Scyl3Q9DBQ7 735 aa12.98□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Sgk1Q9WVC6 431 aa12.98□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Il18rapQ9Z2B1 614 aa12.98□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Grin2dQ03391 1323 aa12.97□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 1700031M16RikA0A087WSH0 82 aa12.97□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Gm12394A2AKP6 982 aa12.97□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Gm4846B2RWH8 538 aa12.97□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Top6blJ3QMY9 579 aa12.97□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Gm8298J3QPI0 401 aa12.97□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Cbfa2t3O54972 620 aa12.97□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Myl1P05977 188 aa12.97□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Rfx2P48379 717 aa12.97□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Dsc3P55850 896 aa12.97□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 IhhP97812 411 aa12.97□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Fam171bQ14CH0 825 aa12.97□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Mrpl10Q3TBW2 262 aaKnown RBP12.97□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Cldn11Q60771 207 aa12.97□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Sp9Q64HY3 484 aa12.97□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Olfr212Q7TS33 327 aa12.97□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Noc4lQ8BHY2 516 aa12.97□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Rasal3Q8C2K5 1041 aa12.97□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Naa30Q8CES0 364 aa12.97□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Wdr24Q8CFJ9 790 aa12.97□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Dnttip2Q8R2M2 758 aaKnown RBP12.97□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Nle1Q8VEJ4 485 aa12.97□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 MbipQ99LQ1 341 aa12.97□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Lamtor5Q9D1L9 91 aa12.97□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Actn2Q9JI91 894 aa12.97□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Nme7Q9QXL8 395 aa12.97□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Myh10Q61879 1976 aaKnown RBP12.96□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Mcm3apQ9WUU9 1971 aa12.96□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Igkv5-45A0A0B4J1J1 115 aa12.96□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Rap1gapA2ALS5 663 aa12.96□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Vmn2r72D3Z4N8 856 aa12.96□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Adamtsl5D3Z689 485 aa12.96□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Hsd17b14E9Q3D4 273 aa12.96□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Rad51ap2G3UW63 976 aa12.96□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Cacna2d1O08532 1103 aa12.96□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Gfra2O08842 464 aa12.96□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Myl4P09541 193 aaKnown RBP12.96□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 JundP15066 341 aa12.96□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Ube2hP62257 183 aa12.96□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 YwhaqP68254 245 aaKnown RBP12.96□□□□□ -0.33
Ccdc28b-202ENSMUST00000106035 Taar7eQ5QD09 358 aa12.96□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 23.7 ms