RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Agap3Q8VHH5 910 aa11.35□□□□□ -0.59
Msh3-201ENSMUST00000022220 Nek8Q91ZR4 698 aa11.35□□□□□ -0.59
Msh3-201ENSMUST00000022220 Q9D9D9 101 aa11.35□□□□□ -0.59
Msh3-201ENSMUST00000022220 MrgbpQ9DAT2 204 aa11.35□□□□□ -0.59
Msh3-201ENSMUST00000022220 NfkbizQ9EST8 728 aa11.35□□□□□ -0.59
Msh3-201ENSMUST00000022220 Ighv11-2A0A075B5R8 117 aa11.34□□□□□ -0.59
Msh3-201ENSMUST00000022220 Gm6370A0A0G2JGX9 315 aa11.34□□□□□ -0.59
Msh3-201ENSMUST00000022220 Ccdc8D3YZV8 685 aa11.34□□□□□ -0.59
Msh3-201ENSMUST00000022220 Klhl33G3UW92 533 aa11.34□□□□□ -0.59
Msh3-201ENSMUST00000022220 Gm6309L7N481 315 aa11.34□□□□□ -0.59
Msh3-201ENSMUST00000022220 Pex5O09012 639 aa11.34□□□□□ -0.59
Msh3-201ENSMUST00000022220 PrlP06879 226 aa11.34□□□□□ -0.59
Msh3-201ENSMUST00000022220 Kcnq1P97414 668 aa11.34□□□□□ -0.59
Msh3-201ENSMUST00000022220 Q14AM7 275 aa11.34□□□□□ -0.59
Msh3-201ENSMUST00000022220 Mylk3Q3UIZ8 795 aa11.34□□□□□ -0.59
Msh3-201ENSMUST00000022220 Fam198aQ3UY90 562 aa11.34□□□□□ -0.59
Msh3-201ENSMUST00000022220 Sema5bQ60519 1093 aa11.34□□□□□ -0.59
Msh3-201ENSMUST00000022220 Nipa1Q8BHK1 323 aa11.34□□□□□ -0.59
Msh3-201ENSMUST00000022220 Suds3Q8BR65 328 aa11.34□□□□□ -0.59
Msh3-201ENSMUST00000022220 Apol9bQ8C7I4 310 aa11.34□□□□□ -0.59
Msh3-201ENSMUST00000022220 Tmem132cQ8CEF9 1099 aa11.34□□□□□ -0.59
Msh3-201ENSMUST00000022220 OafQ8QZR4 282 aa11.34□□□□□ -0.59
Msh3-201ENSMUST00000022220 Apol9aQ8VDU3 310 aa11.34□□□□□ -0.59
Msh3-201ENSMUST00000022220 Olfr393Q8VGR6 312 aa11.34□□□□□ -0.59
Msh3-201ENSMUST00000022220 Wars2Q9CYK1 360 aa11.34□□□□□ -0.59
Msh3-201ENSMUST00000022220 Q9D1Z2 194 aa11.34□□□□□ -0.59
Msh3-201ENSMUST00000022220 Tmem68Q9D850 329 aa11.34□□□□□ -0.59
Msh3-201ENSMUST00000022220 Rps6ka2Q9WUT3 733 aa11.34□□□□□ -0.59
Msh3-201ENSMUST00000022220 Krt16Q9Z2K1 469 aa11.34□□□□□ -0.59
Msh3-201ENSMUST00000022220 Ms4a14A0A087WSD2 1232 aa11.34□□□□□ -0.59
Msh3-201ENSMUST00000022220 Mindy4b-psA0A1W2P7H6 457 aa11.34□□□□□ -0.59
Msh3-201ENSMUST00000022220 Kiaa1522A2A7S8 1013 aa11.34□□□□□ -0.59
Msh3-201ENSMUST00000022220 2610008E11RikG3X964 669 aa11.34□□□□□ -0.59
Msh3-201ENSMUST00000022220 Galnt4O08832 578 aa11.34□□□□□ -0.59
Msh3-201ENSMUST00000022220 VegfaQ00731 214 aa11.34□□□□□ -0.59
Msh3-201ENSMUST00000022220 Ly9Q01965 654 aa11.34□□□□□ -0.59
Msh3-201ENSMUST00000022220 Esyt3Q5DTI8 891 aa11.34□□□□□ -0.59
Msh3-201ENSMUST00000022220 Pick1Q62083 416 aa11.34□□□□□ -0.59
Msh3-201ENSMUST00000022220 CbarpQ66L44 698 aa11.34□□□□□ -0.59
Msh3-201ENSMUST00000022220 FsbpQ8BKE5 299 aa11.34□□□□□ -0.59
Msh3-201ENSMUST00000022220 Btbd9Q8C726 612 aa11.34□□□□□ -0.59
Msh3-201ENSMUST00000022220 Olfr1499Q8VG65 314 aa11.34□□□□□ -0.59
Msh3-201ENSMUST00000022220 Noa1Q9JJG9 693 aaKnown RBP11.34□□□□□ -0.59
Msh3-201ENSMUST00000022220 NumbQ9QZS3 653 aa11.34□□□□□ -0.59
Msh3-201ENSMUST00000022220 Nme3Q9WV85 169 aa11.34□□□□□ -0.59
Msh3-201ENSMUST00000022220 Lama4P97927 1816 aa11.34□□□□□ -0.59
Msh3-201ENSMUST00000022220 6030498E09RikB1AX85 169 aa11.34□□□□□ -0.59
Msh3-201ENSMUST00000022220 Rfx8D3YU81 596 aa11.34□□□□□ -0.59
Msh3-201ENSMUST00000022220 Zfp94E9Q6Y4 486 aa11.34□□□□□ -0.59
Msh3-201ENSMUST00000022220 Serpinb2P12388 415 aa11.34□□□□□ -0.59
Msh3-201ENSMUST00000022220 Gjb1P28230 283 aa11.34□□□□□ -0.59
Msh3-201ENSMUST00000022220 PhbP67778 272 aaKnown RBP11.34□□□□□ -0.59
Msh3-201ENSMUST00000022220 MyrflQ3UN70 904 aa11.34□□□□□ -0.59
Msh3-201ENSMUST00000022220 Tp53i13Q5F267 385 aa11.34□□□□□ -0.59
Msh3-201ENSMUST00000022220 Fam214aQ69ZK7 1075 aa11.34□□□□□ -0.59
Msh3-201ENSMUST00000022220 Tmem161bQ8C2L6 487 aa11.34□□□□□ -0.59
Msh3-201ENSMUST00000022220 Prr33Q8C494 260 aa11.34□□□□□ -0.59
Msh3-201ENSMUST00000022220 Gps1Q99LD4 471 aaKnown RBP11.34□□□□□ -0.59
Msh3-201ENSMUST00000022220 Sppl3Q9CUS9 384 aa11.34□□□□□ -0.59
Msh3-201ENSMUST00000022220 Mageb3Q9D2H4 330 aa11.34□□□□□ -0.59
Msh3-201ENSMUST00000022220 CntrlA2AL36 2334 aa11.34□□□□□ -0.59
Msh3-201ENSMUST00000022220 TazI7HJS2 263 aa11.33□□□□□ -0.6
Msh3-201ENSMUST00000022220 Cyth3O08967 399 aa11.33□□□□□ -0.6
Msh3-201ENSMUST00000022220 B3gat3P58158 335 aa11.33□□□□□ -0.6
Msh3-201ENSMUST00000022220 Atp13a5Q3TYU2 1216 aa11.33□□□□□ -0.6
Msh3-201ENSMUST00000022220 Znf507Q6ZPY5 941 aa11.33□□□□□ -0.6
Msh3-201ENSMUST00000022220 Pja2Q80U04 707 aa11.33□□□□□ -0.6
Msh3-201ENSMUST00000022220 Impg2Q80XH2 1243 aa11.33□□□□□ -0.6
Msh3-201ENSMUST00000022220 LppQ8BFW7 613 aa11.33□□□□□ -0.6
Msh3-201ENSMUST00000022220 Kbtbd3Q8BHI4 607 aa11.33□□□□□ -0.6
Msh3-201ENSMUST00000022220 Unc5bQ8K1S3 945 aa11.33□□□□□ -0.6
Msh3-201ENSMUST00000022220 Pcdha9Q91Y11 979 aa11.33□□□□□ -0.6
Msh3-201ENSMUST00000022220 Tbrg4Q91YM4 630 aaKnown RBP11.33□□□□□ -0.6
Msh3-201ENSMUST00000022220 GarsQ9CZD3 729 aaKnown RBP11.33□□□□□ -0.6
Msh3-201ENSMUST00000022220 Ddx56Q9D0R4 546 aaKnown RBP11.33□□□□□ -0.6
Msh3-201ENSMUST00000022220 Ube4bQ9ES00 1173 aa11.33□□□□□ -0.6
Msh3-201ENSMUST00000022220 Tbx20Q9ES03 445 aa11.33□□□□□ -0.6
Msh3-201ENSMUST00000022220 Ccdc22Q9JIG7 627 aa11.33□□□□□ -0.6
Msh3-201ENSMUST00000022220 Gbp6A0A0G2JDV3 611 aa11.33□□□□□ -0.6
Msh3-201ENSMUST00000022220 Ttc17E9PVB5 1198 aa11.33□□□□□ -0.6
Msh3-201ENSMUST00000022220 Gm43302L7N1X8 611 aa11.33□□□□□ -0.6
Msh3-201ENSMUST00000022220 Cyp2b9P12790 491 aa11.33□□□□□ -0.6
Msh3-201ENSMUST00000022220 Usp10P52479 792 aaKnown RBP11.33□□□□□ -0.6
Msh3-201ENSMUST00000022220 Gtf2bP62915 316 aa11.33□□□□□ -0.6
Msh3-201ENSMUST00000022220 Taf1bP97358 586 aa11.33□□□□□ -0.6
Msh3-201ENSMUST00000022220 Ssxb5Q6XAS2 159 aa11.33□□□□□ -0.6
Msh3-201ENSMUST00000022220 Jade1Q6ZPI0 834 aaKnown RBP11.33□□□□□ -0.6
Msh3-201ENSMUST00000022220 Plppr4Q7TME0 766 aa11.33□□□□□ -0.6
Msh3-201ENSMUST00000022220 Q8CD60 292 aa11.33□□□□□ -0.6
Msh3-201ENSMUST00000022220 Arfip2Q8K221 341 aa11.33□□□□□ -0.6
Msh3-201ENSMUST00000022220 Tmprss4Q8VCA5 435 aa11.33□□□□□ -0.6
Msh3-201ENSMUST00000022220 Pcdha11Q91Y19 950 aa11.33□□□□□ -0.6
Msh3-201ENSMUST00000022220 Micu3Q9CTY5 523 aa11.33□□□□□ -0.6
Msh3-201ENSMUST00000022220 PmpcbQ9CXT8 489 aa11.33□□□□□ -0.6
Msh3-201ENSMUST00000022220 Tsc1Q9EP53 1161 aa11.33□□□□□ -0.6
Msh3-201ENSMUST00000022220 PorcnQ9JJJ7 461 aa11.33□□□□□ -0.6
Msh3-201ENSMUST00000022220 Cd97Q9Z0M6 818 aa11.33□□□□□ -0.6
Msh3-201ENSMUST00000022220 Crlf3Q9Z2L7 442 aa11.33□□□□□ -0.6
Msh3-201ENSMUST00000022220 NesQ6P5H2 1864 aaKnown RBP11.33□□□□□ -0.6
Msh3-201ENSMUST00000022220 JrklB2RRL2 523 aa11.33□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 17.8 ms