RNA–Protein interactions for RNA: YPR040W

TIP41, Transcript of Protein that interacts with Tap42p, which regulates PP2A, yeast

Gene TIP41, Length 1,071 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIP41	YPR040W	NUF2	P33895	451 aa		3.21	□□□□□ -1.9
TIP41	YPR040W	FMP23	P38231	175 aa		3.21	□□□□□ -1.9
TIP41	YPR040W	FCY21	P40039	528 aa		3.21	□□□□□ -1.9
TIP41	YPR040W	GPI14	P47088	403 aa	Known RBP	3.2	□□□□□ -1.9
TIP41	YPR040W	BAT2	P47176	376 aa	Known RBP	3.2	□□□□□ -1.9
TIP41	YPR040W	YAR023C	D6VPM8	179 aa		3.19	□□□□□ -1.9
TIP41	YPR040W	YOL162W	P0CF19	215 aa		3.19	□□□□□ -1.9
TIP41	YPR040W	DDI2	P0CH63	225 aa		3.19	□□□□□ -1.9
TIP41	YPR040W	DDI3	P0CH64	225 aa		3.19	□□□□□ -1.9
TIP41	YPR040W	PHO85	P17157	305 aa		3.19	□□□□□ -1.9
TIP41	YPR040W	NRG2	P38082	220 aa		3.19	□□□□□ -1.9
TIP41	YPR040W	AME1	P38313	324 aa		3.19	□□□□□ -1.9
TIP41	YPR040W	SVP26	P38869	228 aa		3.19	□□□□□ -1.9
TIP41	YPR040W	XPT1	P47165	209 aa		3.19	□□□□□ -1.9
TIP41	YPR040W	GPI11	Q06636	219 aa		3.19	□□□□□ -1.9
TIP41	YPR040W	FZF1	P32805	299 aa		3.18	□□□□□ -1.9
TIP41	YPR040W	VTC1	P40046	129 aa	RIP-Chip data	3.18	□□□□□ -1.9	not detected
TIP41	YPR040W	CCC1	P47818	322 aa		3.18	□□□□□ -1.9
TIP41	YPR040W	MPC3	P53311	146 aa		3.18	□□□□□ -1.9
TIP41	YPR040W	PLP1	Q04004	230 aa		3.18	□□□□□ -1.9
TIP41	YPR040W	MHF2	Q3E829	80 aa		3.18	□□□□□ -1.9
TIP41	YPR040W	ATG40	Q99325	256 aa		3.18	□□□□□ -1.9
TIP41	YPR040W	SRP102	P36057	244 aa	Predicted RBP	3.17	□□□□□ -1.9
TIP41	YPR040W	DSE2	P38844	325 aa		3.17	□□□□□ -1.9
TIP41	YPR040W	YPL067C	Q02754	198 aa		3.17	□□□□□ -1.9
TIP41	YPR040W	AIM36	Q03798	255 aa		3.17	□□□□□ -1.9
TIP41	YPR040W	NAT3	Q06504	195 aa		3.17	□□□□□ -1.9
TIP41	YPR040W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	3.16	□□□□□ -1.9	not detected
TIP41	YPR040W	YFL019C	P43576	117 aa		3.16	□□□□□ -1.9
TIP41	YPR040W	YMR295C	Q03559	197 aa		3.16	□□□□□ -1.9
TIP41	YPR040W	TFC1	P32367	649 aa		3.15	□□□□□ -1.91
TIP41	YPR040W	TMA19	P35691	167 aa	Known RBP	3.15	□□□□□ -1.91
TIP41	YPR040W	ECM31	P38122	312 aa		3.15	□□□□□ -1.91
TIP41	YPR040W	YBR209W	P38311	105 aa		3.15	□□□□□ -1.91
TIP41	YPR040W	RFC2	P40348	353 aa		3.15	□□□□□ -1.91
TIP41	YPR040W	YGL101W	P53144	215 aa		3.15	□□□□□ -1.91
TIP41	YPR040W	SAY1	P53324	424 aa		3.15	□□□□□ -1.91
TIP41	YPR040W	HHT1	P61830	136 aa		3.15	□□□□□ -1.91
TIP41	YPR040W	SPC2	Q04969	178 aa		3.15	□□□□□ -1.91
TIP41	YPR040W	HOR7	Q05827	59 aa		3.15	□□□□□ -1.91
TIP41	YPR040W	RFU1	Q08003	200 aa		3.15	□□□□□ -1.91
TIP41	YPR040W	SPC3	Q12133	184 aa		3.15	□□□□□ -1.91
TIP41	YPR040W	YLR236C	A0A023PZG4	107 aa		3.14	□□□□□ -1.91
TIP41	YPR040W	RPS28B	P0C0X0	67 aa	Known RBP	3.14	□□□□□ -1.91
TIP41	YPR040W	SPO13	P23624	291 aa		3.14	□□□□□ -1.91
TIP41	YPR040W	ERJ5	P43613	295 aa	Predicted RBP	3.14	□□□□□ -1.91
TIP41	YPR040W	VPS55	P47111	140 aa		3.14	□□□□□ -1.91
TIP41	YPR040W	SPC24	Q04477	213 aa		3.14	□□□□□ -1.91
TIP41	YPR040W	PRM3	Q08931	133 aa		3.14	□□□□□ -1.91
TIP41	YPR040W	FCY1	Q12178	158 aa		3.14	□□□□□ -1.91
TIP41	YPR040W	DGK1	Q12382	290 aa		3.14	□□□□□ -1.91
TIP41	YPR040W	BOL1	Q3E793	110 aa		3.14	□□□□□ -1.91
TIP41	YPR040W	RPS28A	Q3E7X9	67 aa	Predicted RBP	3.14	□□□□□ -1.91
TIP41	YPR040W	RPL30	P14120	105 aa	Known RBP	3.13	□□□□□ -1.91
TIP41	YPR040W	PDX3	P38075	228 aa	Known RBP	3.12	□□□□□ -1.91
TIP41	YPR040W	SOL1	P50278	321 aa		3.12	□□□□□ -1.91
TIP41	YPR040W	CUE4	Q04201	117 aa	Predicted RBP	3.12	□□□□□ -1.91
TIP41	YPR040W	SHH3	Q04487	196 aa		3.12	□□□□□ -1.91
TIP41	YPR040W	ELP6	Q04868	273 aa		3.12	□□□□□ -1.91
TIP41	YPR040W	FYV12	Q08559	129 aa		3.12	□□□□□ -1.91
TIP41	YPR040W	RAD28	Q12021	506 aa		3.12	□□□□□ -1.91
TIP41	YPR040W	YLR412C-A	Q3E742	68 aa		3.12	□□□□□ -1.91
TIP41	YPR040W	TIR1	P10863	254 aa		3.11	□□□□□ -1.91
TIP41	YPR040W	SBH1	P52870	82 aa		3.11	□□□□□ -1.91
TIP41	YPR040W	HSK3	P69852	69 aa		3.11	□□□□□ -1.91
TIP41	YPR040W	YKR005C	Q02203	525 aa		3.11	□□□□□ -1.91
TIP41	YPR040W	YOR289W	Q12012	251 aa	Predicted RBP	3.11	□□□□□ -1.91
TIP41	YPR040W	RIB3	Q99258	208 aa		3.11	□□□□□ -1.91
TIP41	YPR040W	RPS20	P38701	121 aa	Known RBP	3.1	□□□□□ -1.91
TIP41	YPR040W	YFR035C	P43608	114 aa		3.1	□□□□□ -1.91
TIP41	YPR040W	BUD25	P85052	153 aa		3.1	□□□□□ -1.91
TIP41	YPR040W	MAK3	Q03503	176 aa		3.1	□□□□□ -1.91
TIP41	YPR040W	YHP1	Q04116	353 aa		3.1	□□□□□ -1.91
TIP41	YPR040W	RDI1	Q12434	202 aa		3.1	□□□□□ -1.91
TIP41	YPR040W	PAM17	P36147	197 aa		3.09	□□□□□ -1.91
TIP41	YPR040W	TTI2	P47168	421 aa		3.09	□□□□□ -1.91
TIP41	YPR040W	KNH1	P50112	268 aa		3.09	□□□□□ -1.91
TIP41	YPR040W	YMR253C	Q04835	414 aa		3.09	□□□□□ -1.91
TIP41	YPR040W	IRC23	Q08416	157 aa		3.09	□□□□□ -1.91
TIP41	YPR040W	DER1	P38307	211 aa		3.08	□□□□□ -1.92
TIP41	YPR040W	IPT1	P38954	527 aa		3.08	□□□□□ -1.92
TIP41	YPR040W	SPC25	P40014	221 aa		3.08	□□□□□ -1.92
TIP41	YPR040W	NQM1	P53228	333 aa	Predicted RBP	3.08	□□□□□ -1.92
TIP41	YPR040W	GAL83	Q04739	417 aa		3.08	□□□□□ -1.92
TIP41	YPR040W	ROX3	P25046	220 aa		3.07	□□□□□ -1.92
TIP41	YPR040W	UBC8	P28263	218 aa		3.07	□□□□□ -1.92
TIP41	YPR040W	SRL3	P36167	246 aa		3.07	□□□□□ -1.92
TIP41	YPR040W	CSH1	P38287	376 aa		3.07	□□□□□ -1.92
TIP41	YPR040W	VMA22	P38784	181 aa		3.07	□□□□□ -1.92
TIP41	YPR040W	MPC2	P38857	129 aa		3.07	□□□□□ -1.92
TIP41	YPR040W	GAT4	P40569	121 aa		3.07	□□□□□ -1.92
TIP41	YPR040W	POP3	P53833	195 aa	Predicted RBP	3.07	□□□□□ -1.92
TIP41	YPR040W	TMA20	P89886	181 aa	Predicted RBP	3.07	□□□□□ -1.92
TIP41	YPR040W	UPS1	Q05776	175 aa		3.07	□□□□□ -1.92
TIP41	YPR040W	CPR5	P35176	225 aa		3.06	□□□□□ -1.92
TIP41	YPR040W	NSA2	P40078	261 aa	Known RBP	3.06	□□□□□ -1.92
TIP41	YPR040W	ANT1	Q06497	328 aa		3.06	□□□□□ -1.92
TIP41	YPR040W	SEC11	P15367	167 aa		3.05	□□□□□ -1.92
TIP41	YPR040W	IDP1	P21954	428 aa	Known RBP	3.05	□□□□□ -1.92
TIP41	YPR040W	YCR023C	P25351	611 aa		3.05	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 40.8 ms