RNA–Protein interactions for RNA: YPL047W

SGF11, Transcript of Integral subunit of SAGA histone acetyltransferase complex, yeastyeast

Gene SGF11, Length 300 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGF11YPL047W YGL149WP53116 101 aa-0.42□□□□□ -2.48
SGF11YPL047W ATP14Q12349 124 aa-0.42□□□□□ -2.48
SGF11YPL047W SUA7P29055 345 aaPredicted RBP-0.43□□□□□ -2.48
SGF11YPL047W SFT2P38166 215 aa-0.43□□□□□ -2.48
SGF11YPL047W APQ12P40532 138 aa-0.43□□□□□ -2.48
SGF11YPL047W YLR296WQ05898 108 aa-0.43□□□□□ -2.48
SGF11YPL047W YLR053CQ12026 108 aa-0.43□□□□□ -2.48
SGF11YPL047W GTT2Q12390 233 aa-0.43□□□□□ -2.48
SGF11YPL047W SNT2P53127 1403 aa-0.44□□□□□ -2.48
SGF11YPL047W HSP12P22943 109 aaKnown RBP-0.44□□□□□ -2.48
SGF11YPL047W YHR173CP38864 112 aa-0.44□□□□□ -2.48
SGF11YPL047W YJL218WP40892 196 aaKnown RBP-0.44□□□□□ -2.48
SGF11YPL047W FCF2Q12035 217 aaPredicted RBP-0.44□□□□□ -2.48
SGF11YPL047W EFG1Q3E705 233 aaKnown RBP-0.44□□□□□ -2.48
SGF11YPL047W UBR1P19812 1950 aa-0.45□□□□□ -2.48
SGF11YPL047W RPL35AP0CX84 120 aaKnown RBP-0.45□□□□□ -2.48
SGF11YPL047W RPL35BP0CX85 120 aaKnown RBP-0.45□□□□□ -2.48
SGF11YPL047W FIG1P38224 298 aa-0.45□□□□□ -2.48
SGF11YPL047W VPS55P47111 140 aa-0.45□□□□□ -2.48
SGF11YPL047W HHO1P53551 258 aa-0.45□□□□□ -2.48
SGF11YPL047W LCL1Q02786 101 aa-0.45□□□□□ -2.48
SGF11YPL047W SOM1Q05676 74 aa-0.45□□□□□ -2.48
SGF11YPL047W ENV10Q99382 181 aa-0.45□□□□□ -2.48
SGF11YPL047W BRR2P32639 2163 aaKnown RBP-0.45□□□□□ -2.48
SGF11YPL047W TY1B-HO13535 1793 aa-0.46□□□□□ -2.48
SGF11YPL047W MAK3Q03503 176 aa-0.46□□□□□ -2.48
SGF11YPL047W RAF1Q06891 181 aa-0.46□□□□□ -2.48
SGF11YPL047W YRF1-3P0CX14 1859 aa-0.46□□□□□ -2.48
SGF11YPL047W YRF1-7P0CX15 1859 aa-0.46□□□□□ -2.48
SGF11YPL047W POL2P21951 2222 aaKnown RBP-0.46□□□□□ -2.48
SGF11YPL047W SEC16P48415 2195 aaKnown RBP-0.47□□□□□ -2.48
SGF11YPL047W HAP3P13434 144 aa-0.47□□□□□ -2.48
SGF11YPL047W LSM8P47093 109 aaKnown RBP-0.47□□□□□ -2.48
SGF11YPL047W YDR476CQ03362 224 aa-0.47□□□□□ -2.48
SGF11YPL047W HPA2Q06592 156 aa-0.47□□□□□ -2.48
SGF11YPL047W PBI2P0CT04 75 aaKnown RBP-0.48□□□□□ -2.49
SGF11YPL047W MRPL44P19956 98 aa-0.48□□□□□ -2.49
SGF11YPL047W RPA12P32529 125 aaKnown RBP-0.48□□□□□ -2.49
SGF11YPL047W RPS1AP33442 255 aaKnown RBP-0.48□□□□□ -2.49
SGF11YPL047W ATX1P38636 73 aa-0.48□□□□□ -2.49
SGF11YPL047W AIM18P38884 321 aa-0.48□□□□□ -2.49
SGF11YPL047W YIL163CP40448 117 aa-0.48□□□□□ -2.49
SGF11YPL047W YGR201CP42936 225 aa-0.48□□□□□ -2.49
SGF11YPL047W EFM5P53200 248 aaKnown RBP-0.48□□□□□ -2.49
SGF11YPL047W YNL190WP53872 204 aa-0.48□□□□□ -2.49
SGF11YPL047W YPR202WQ08993 238 aa-0.48□□□□□ -2.49
SGF11YPL047W YBR072C-AQ3E794 53 aa-0.48□□□□□ -2.49
SGF11YPL047W GSP1P32835 219 aaKnown RBP-0.49□□□□□ -2.49
SGF11YPL047W LSM1P47017 172 aaKnown RBP-0.49□□□□□ -2.49
SGF11YPL047W BRP1P53194 125 aa-0.49□□□□□ -2.49
SGF11YPL047W YOR385WQ08909 290 aa-0.49□□□□□ -2.49
SGF11YPL047W PET20Q99373 253 aa-0.49□□□□□ -2.49
SGF11YPL047W RTC6O14464 93 aa-0.5□□□□□ -2.49
SGF11YPL047W HSP10P38910 106 aa-0.5□□□□□ -2.49
SGF11YPL047W GIM3P53900 129 aa-0.5□□□□□ -2.49
SGF11YPL047W YGR240C-AQ3E786 66 aa-0.5□□□□□ -2.49
SGF11YPL047W DDP1Q99321 188 aaKnown RBP-0.5□□□□□ -2.49
SGF11YPL047W VPS51P36116 164 aa-0.51□□□□□ -2.49
SGF11YPL047W NSL1Q12143 216 aa-0.51□□□□□ -2.49
SGF11YPL047W OCA6Q12454 224 aa-0.51□□□□□ -2.49
SGF11YPL047W PRS3P38689 320 aaKnown RBP-0.52□□□□□ -2.49
SGF11YPL047W GRX3Q03835 250 aa-0.52□□□□□ -2.49
SGF11YPL047W RPL36BO14455 100 aaKnown RBP-0.53□□□□□ -2.49
SGF11YPL047W RPL36AP05745 100 aaPredicted RBP-0.53□□□□□ -2.49
SGF11YPL047W ICS3P47034 131 aa-0.53□□□□□ -2.49
SGF11YPL047W SPG1P50088 95 aa-0.53□□□□□ -2.49
SGF11YPL047W GIM5Q04493 163 aa-0.53□□□□□ -2.49
SGF11YPL047W YGL041C-BQ3E750 60 aa-0.53□□□□□ -2.49
SGF11YPL047W PAU21P0CE86 164 aa-0.54□□□□□ -2.5
SGF11YPL047W PAU22P0CE87 164 aa-0.54□□□□□ -2.5
SGF11YPL047W QCR10P37299 77 aa-0.54□□□□□ -2.5
SGF11YPL047W YGR017WP53210 297 aa-0.54□□□□□ -2.5
SGF11YPL047W RPL22AP05749 121 aaKnown RBP-0.55□□□□□ -2.5
SGF11YPL047W SGF11Q03067 99 aa-0.55□□□□□ -2.5
SGF11YPL047W RUB1Q03919 77 aa-0.55□□□□□ -2.5
SGF11YPL047W SDH7Q04401 133 aa-0.55□□□□□ -2.5
SGF11YPL047W TY4B-HP0C2J7 1802 aa-0.56□□□□□ -2.5
SGF11YPL047W PHS1P40857 217 aa-0.56□□□□□ -2.5
SGF11YPL047W SUI1P32911 108 aaKnown RBP-0.57□□□□□ -2.5
SGF11YPL047W YAP3P38749 330 aa-0.57□□□□□ -2.5
SGF11YPL047W YAL064WP39711 94 aa-0.57□□□□□ -2.5
SGF11YPL047W MRPS12P53732 153 aa-0.57□□□□□ -2.5
SGF11YPL047W ATG38Q05789 226 aaKnown RBP-0.57□□□□□ -2.5
SGF11YPL047W CCW14O13547 238 aa-0.58□□□□□ -2.5
SGF11YPL047W QCR2P07257 368 aa-0.58□□□□□ -2.5
SGF11YPL047W YCR050CP25630 102 aa-0.58□□□□□ -2.5
SGF11YPL047W DER1P38307 211 aa-0.58□□□□□ -2.5
SGF11YPL047W CYB5P40312 120 aa-0.58□□□□□ -2.5
SGF11YPL047W RAV2Q03956 351 aa-0.58□□□□□ -2.5
SGF11YPL047W YDR366CP87287 132 aa-0.59□□□□□ -2.5
SGF11YPL047W ECM5Q03214 1411 aa-0.6□□□□□ -2.51
SGF11YPL047W RPS28BP0C0X0 67 aaKnown RBP-0.6□□□□□ -2.51
SGF11YPL047W RPC19P28000 142 aaKnown RBP-0.6□□□□□ -2.51
SGF11YPL047W AME1P38313 324 aa-0.6□□□□□ -2.51
SGF11YPL047W PKR1Q03880 122 aaKnown RBP-0.6□□□□□ -2.51
SGF11YPL047W YLR285C-AQ3E771 56 aa-0.6□□□□□ -2.51
SGF11YPL047W CMC2Q3E7A4 109 aa-0.6□□□□□ -2.51
SGF11YPL047W RPS28AQ3E7X9 67 aaPredicted RBP-0.6□□□□□ -2.51
SGF11YPL047W GCV3P39726 170 aaPredicted RBP-0.61□□□□□ -2.51
SGF11YPL047W YMR320WQ04897 101 aa-0.61□□□□□ -2.51
Retrieved 100 of 5,963 RNA–protein pairs in 150 ms