RNA–Protein interactions for RNA: YPL016W

SWI1, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SWI1, Length 3,945 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI1YPL016W RPS26AP39938 119 aaKnown RBP3□□□□□ -1.93
SWI1YPL016W RPS26BP39939 119 aaKnown RBP3□□□□□ -1.93
SWI1YPL016W YIL059CP40520 121 aa3□□□□□ -1.93
SWI1YPL016W ATX1P38636 73 aa3□□□□□ -1.93
SWI1YPL016W TDA4P47153 279 aa3□□□□□ -1.93
SWI1YPL016W PCP1P53259 346 aa3□□□□□ -1.93
SWI1YPL016W LIP2Q06005 328 aa3□□□□□ -1.93
SWI1YPL016W RPL27AP0C2H6 136 aaKnown RBP3□□□□□ -1.93
SWI1YPL016W RPL27BP0C2H7 136 aaKnown RBP3□□□□□ -1.93
SWI1YPL016W YPT10P38146 199 aa3□□□□□ -1.93
SWI1YPL016W YER079WP40052 210 aaKnown RBP3□□□□□ -1.93
SWI1YPL016W SPI1P40092 148 aa3□□□□□ -1.93
SWI1YPL016W YMR103CQ04436 120 aa3□□□□□ -1.93
SWI1YPL016W YIL046W-AQ3E7Z4 54 aa3□□□□□ -1.93
SWI1YPL016W FUB1P25659 250 aa3□□□□□ -1.93
SWI1YPL016W IMP1P28627 190 aa3□□□□□ -1.93
SWI1YPL016W DFG10P40526 253 aa3□□□□□ -1.93
SWI1YPL016W YFR054CP43622 192 aa3□□□□□ -1.93
SWI1YPL016W XPT1P47165 209 aa3□□□□□ -1.93
SWI1YPL016W ROX3P25046 220 aa2.99□□□□□ -1.93
SWI1YPL016W YHR140WP38842 239 aa2.99□□□□□ -1.93
SWI1YPL016W YLR152CP54072 576 aa2.99□□□□□ -1.93
SWI1YPL016W YPR011CQ12251 326 aa2.99□□□□□ -1.93
SWI1YPL016W BPH1P25356 2167 aa2.99□□□□□ -1.93
SWI1YPL016W RPS20P38701 121 aaKnown RBP2.99□□□□□ -1.93
SWI1YPL016W TIM18Q08749 192 aa2.99□□□□□ -1.93
SWI1YPL016W RPL7BQ12213 244 aaKnown RBP2.99□□□□□ -1.93
SWI1YPL016W YOR376W-AQ3E805 51 aa2.99□□□□□ -1.93
SWI1YPL016W YLR302CO13544 120 aa2.99□□□□□ -1.93
SWI1YPL016W RPB8P20436 146 aa2.99□□□□□ -1.93
SWI1YPL016W QRI5P32344 111 aa2.99□□□□□ -1.93
SWI1YPL016W TIM12P32830 109 aa2.99□□□□□ -1.93
SWI1YPL016W HSK3P69852 69 aa2.99□□□□□ -1.93
SWI1YPL016W HUG1Q6Q5K6 68 aa2.99□□□□□ -1.93
SWI1YPL016W GCN1P33892 2672 aaKnown RBP2.98□□□□□ -1.93
SWI1YPL016W RPL23AP0CX41 137 aaKnown RBP2.98□□□□□ -1.93
SWI1YPL016W RPL23BP0CX42 137 aaKnown RBP2.98□□□□□ -1.93
SWI1YPL016W MRS3P10566 314 aa2.98□□□□□ -1.93
SWI1YPL016W YOR105WQ08504 108 aa2.98□□□□□ -1.93
SWI1YPL016W YCR007CP25354 239 aa2.98□□□□□ -1.93
SWI1YPL016W YCR050CP25630 102 aa2.98□□□□□ -1.93
SWI1YPL016W TIF34P40217 347 aaKnown RBP2.98□□□□□ -1.93
SWI1YPL016W YDL186WP48568 277 aa2.98□□□□□ -1.93
SWI1YPL016W TOM7P53507 60 aa2.98□□□□□ -1.93
SWI1YPL016W YPL039WQ03080 316 aa2.98□□□□□ -1.93
SWI1YPL016W GAT3Q07928 141 aa2.98□□□□□ -1.93
SWI1YPL016W RPS21AP0C0V8 87 aaKnown RBP2.98□□□□□ -1.93
SWI1YPL016W ECM15P35195 104 aa2.98□□□□□ -1.93
SWI1YPL016W CYB5P40312 120 aa2.98□□□□□ -1.93
SWI1YPL016W YFR045WP43617 309 aa2.98□□□□□ -1.93
SWI1YPL016W RRG8Q06109 277 aa2.98□□□□□ -1.93
SWI1YPL016W YPL264CQ08980 353 aa2.98□□□□□ -1.93
SWI1YPL016W YPR064WQ12492 139 aa2.98□□□□□ -1.93
SWI1YPL016W NAG1Q8TGN9 163 aa2.98□□□□□ -1.93
SWI1YPL016W GPI18P38211 433 aa2.97□□□□□ -1.93
SWI1YPL016W GPI2P46961 280 aa2.97□□□□□ -1.93
SWI1YPL016W RAV2Q03956 351 aa2.97□□□□□ -1.93
SWI1YPL016W MIX14Q04341 121 aa2.97□□□□□ -1.93
SWI1YPL016W YLR281CQ05863 155 aa2.97□□□□□ -1.93
SWI1YPL016W RDL2Q08742 149 aaKnown RBP2.97□□□□□ -1.93
SWI1YPL016W EAF6P47128 113 aa2.97□□□□□ -1.93
SWI1YPL016W RIM9Q04734 239 aa2.97□□□□□ -1.93
SWI1YPL016W NPC2Q12408 173 aa2.97□□□□□ -1.93
SWI1YPL016W RPL42AP0CX27 106 aaKnown RBP2.97□□□□□ -1.93
SWI1YPL016W RPL42BP0CX28 106 aaKnown RBP2.97□□□□□ -1.93
SWI1YPL016W RPB10P22139 70 aa2.97□□□□□ -1.93
SWI1YPL016W SWD3P38123 315 aa2.97□□□□□ -1.93
SWI1YPL016W YHR180WP38868 163 aa2.97□□□□□ -1.93
SWI1YPL016W JJJ3P47138 172 aa2.97□□□□□ -1.93
SWI1YPL016W PET191Q02772 108 aa2.97□□□□□ -1.93
SWI1YPL016W SDH7Q04401 133 aa2.97□□□□□ -1.93
SWI1YPL016W YDL211CQ12121 372 aa2.97□□□□□ -1.93
SWI1YPL016W Q0255P03881 472 aa2.96□□□□□ -1.94
SWI1YPL016W INO2P26798 304 aa2.96□□□□□ -1.94
SWI1YPL016W CSH1P38287 376 aa2.96□□□□□ -1.94
SWI1YPL016W DSE2P38844 325 aa2.96□□□□□ -1.94
SWI1YPL016W MST28P39552 234 aa2.96□□□□□ -1.94
SWI1YPL016W EDC1P53080 175 aaPredicted RBP2.96□□□□□ -1.94
SWI1YPL016W RTG1P32607 177 aa2.96□□□□□ -1.94
SWI1YPL016W UBC9P50623 157 aaPredicted RBP2.96□□□□□ -1.94
SWI1YPL016W LYS1P38998 373 aaRIP-Chip data2.96□□□□□ -1.94 RIP-Chip
SWI1YPL016W SBH1P52870 82 aa2.96□□□□□ -1.94
SWI1YPL016W APS2Q00381 147 aa2.96□□□□□ -1.94
SWI1YPL016W YFL041W-AQ3E817 63 aa2.96□□□□□ -1.94
SWI1YPL016W YMR141CP40211 102 aa2.95□□□□□ -1.94
SWI1YPL016W ECO1P43605 281 aa2.95□□□□□ -1.94
SWI1YPL016W YGR050CP53231 118 aa2.95□□□□□ -1.94
SWI1YPL016W SNT309Q06091 175 aaPredicted RBP2.95□□□□□ -1.94
SWI1YPL016W HNT3Q08702 217 aa2.95□□□□□ -1.94
SWI1YPL016W YKL023C-AQ2V2P3 75 aa2.95□□□□□ -1.94
SWI1YPL016W HEM4P06174 275 aa2.95□□□□□ -1.94
SWI1YPL016W YPS1P32329 569 aa2.95□□□□□ -1.94
SWI1YPL016W NHP2P32495 156 aaPredicted RBP2.95□□□□□ -1.94
SWI1YPL016W GLE2P40066 365 aa2.95□□□□□ -1.94
SWI1YPL016W VHS2P40463 436 aa2.95□□□□□ -1.94
SWI1YPL016W TPC1P53257 314 aa2.95□□□□□ -1.94
SWI1YPL016W YOR097CQ12274 175 aaPredicted RBP2.95□□□□□ -1.94
SWI1YPL016W YMR31P19955 123 aa2.95□□□□□ -1.94
SWI1YPL016W MED6P38782 295 aa2.95□□□□□ -1.94
SWI1YPL016W SGN1P40561 250 aaKnown RBP RIP-Chip data2.95□□□□□ -1.94not detected
Retrieved 100 of 5,963 RNA–protein pairs in 29.5 ms