RNA–Protein interactions for RNA: YPL004C

LSP1, Transcript of Eisosome core component, yeastyeast

Gene LSP1, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSP1YPL004C DAD1Q12248 94 aa5.93□□□□□ -1.46
LSP1YPL004C YLR342W-AQ3E810 57 aa5.93□□□□□ -1.46
LSP1YPL004C TIR1P10863 254 aa5.92□□□□□ -1.46
LSP1YPL004C POF1P25576 258 aa5.92□□□□□ -1.46
LSP1YPL004C VHS2P40463 436 aa5.92□□□□□ -1.46
LSP1YPL004C VAM10Q08474 114 aa5.92□□□□□ -1.46
LSP1YPL004C TMA17Q12513 150 aa5.92□□□□□ -1.46
LSP1YPL004C YOL085CQ99345 113 aa5.92□□□□□ -1.46
LSP1YPL004C MRPL4P36517 319 aa5.91□□□□□ -1.46
LSP1YPL004C YBR090CP38253 122 aa5.91□□□□□ -1.46
LSP1YPL004C POG1P40473 351 aa5.91□□□□□ -1.46
LSP1YPL004C YOR105WQ08504 108 aa5.91□□□□□ -1.46
LSP1YPL004C LAC1P28496 418 aa5.9□□□□□ -1.46
LSP1YPL004C FZF1P32805 299 aa5.9□□□□□ -1.46
LSP1YPL004C SRP14P38985 146 aa5.9□□□□□ -1.46
LSP1YPL004C HIT1P46973 164 aa5.9□□□□□ -1.46
LSP1YPL004C COX16P47081 118 aa5.9□□□□□ -1.46
LSP1YPL004C DAD3P69850 94 aa5.9□□□□□ -1.46
LSP1YPL004C SNO1Q03144 224 aa5.9□□□□□ -1.46
LSP1YPL004C FMP49A0A023PZB3 126 aa5.89□□□□□ -1.47
LSP1YPL004C RPL12AP0CX53 165 aaKnown RBP5.89□□□□□ -1.47
LSP1YPL004C RPL12BP0CX54 165 aa5.89□□□□□ -1.47
LSP1YPL004C YFR045WP43617 309 aa5.89□□□□□ -1.47
LSP1YPL004C MOG1P47123 218 aa5.89□□□□□ -1.47
LSP1YPL004C UPS3Q04006 179 aa5.89□□□□□ -1.47
LSP1YPL004C NAT3Q06504 195 aa5.89□□□□□ -1.47
LSP1YPL004C SMT3Q12306 101 aaKnown RBP5.89□□□□□ -1.47
LSP1YPL004C MRPS9P38120 278 aa5.88□□□□□ -1.47
LSP1YPL004C KEG1P43614 200 aa5.88□□□□□ -1.47
LSP1YPL004C YDL183CP48569 320 aa5.88□□□□□ -1.47
LSP1YPL004C TIM21P53220 239 aa5.88□□□□□ -1.47
LSP1YPL004C SGF11Q03067 99 aa5.88□□□□□ -1.47
LSP1YPL004C DCN1Q12395 269 aa5.88□□□□□ -1.47
LSP1YPL004C ADH3P07246 375 aaKnown RBP5.87□□□□□ -1.47
LSP1YPL004C YCR001WP25347 104 aa5.87□□□□□ -1.47
LSP1YPL004C QRI5P32344 111 aa5.87□□□□□ -1.47
LSP1YPL004C YDR366CP87287 132 aa5.87□□□□□ -1.47
LSP1YPL004C ORM2Q06144 216 aa5.87□□□□□ -1.47
LSP1YPL004C TIM22Q12328 207 aa5.87□□□□□ -1.47
LSP1YPL004C Q0255P03881 472 aa5.86□□□□□ -1.47
LSP1YPL004C AGA1P32323 725 aa5.86□□□□□ -1.47
LSP1YPL004C NTF2P33331 125 aaKnown RBP5.86□□□□□ -1.47
LSP1YPL004C HSP10P38910 106 aa5.86□□□□□ -1.47
LSP1YPL004C YCH1P42937 148 aa5.86□□□□□ -1.47
LSP1YPL004C BRP1P53194 125 aa5.86□□□□□ -1.47
LSP1YPL004C GIM5Q04493 163 aa5.86□□□□□ -1.47
LSP1YPL004C YLR118CQ12354 227 aa5.86□□□□□ -1.47
LSP1YPL004C YCR075W-AQ3E830 75 aa5.86□□□□□ -1.47
LSP1YPL004C YCL001W-BQ96VH2 84 aa5.86□□□□□ -1.47
LSP1YPL004C MRPL31P14063 131 aaPredicted RBP5.85□□□□□ -1.47
LSP1YPL004C VMA16P23968 213 aa5.85□□□□□ -1.47
LSP1YPL004C RRT13P40042 185 aa5.85□□□□□ -1.47
LSP1YPL004C PGD1P40356 397 aa5.85□□□□□ -1.47
LSP1YPL004C HAL1Q01766 294 aa5.85□□□□□ -1.47
LSP1YPL004C YBR200W-AQ3E755 54 aa5.85□□□□□ -1.47
LSP1YPL004C YBR126W-AQ8TGU7 68 aa5.85□□□□□ -1.47
LSP1YPL004C NHP6AP11632 93 aaKnown RBP5.84□□□□□ -1.47
LSP1YPL004C CNB1P25296 175 aa5.84□□□□□ -1.47
LSP1YPL004C SIT1P39980 628 aa5.84□□□□□ -1.47
LSP1YPL004C YGR026WP53217 278 aa5.84□□□□□ -1.47
LSP1YPL004C DIA1P54005 336 aa5.84□□□□□ -1.47
LSP1YPL004C ATG33Q06485 197 aa5.84□□□□□ -1.47
LSP1YPL004C YOP1Q12402 180 aa5.84□□□□□ -1.47
LSP1YPL004C HMRA1P0CY11 126 aa5.83□□□□□ -1.48
LSP1YPL004C RPL16BP26785 198 aaKnown RBP5.83□□□□□ -1.48
LSP1YPL004C MIX23P38162 196 aa5.82□□□□□ -1.48
LSP1YPL004C ATG8P38182 117 aaRIP-Chip data5.82□□□□□ -1.48not detected
LSP1YPL004C YPS5P53057 165 aa5.82□□□□□ -1.48
LSP1YPL004C APS2Q00381 147 aa5.82□□□□□ -1.48
LSP1YPL004C AIM34Q03673 198 aa5.82□□□□□ -1.48
LSP1YPL004C RPB11P38902 120 aa5.81□□□□□ -1.48
LSP1YPL004C PAU15P40585 124 aa5.81□□□□□ -1.48
LSP1YPL004C MGA1P53050 456 aa5.81□□□□□ -1.48
LSP1YPL004C ARC18Q05933 178 aaKnown RBP5.81□□□□□ -1.48
LSP1YPL004C CSM4Q08955 156 aa5.81□□□□□ -1.48
LSP1YPL004C YGR240C-AQ3E786 66 aa5.81□□□□□ -1.48
LSP1YPL004C YPR053CQ6Q5F3 151 aa5.81□□□□□ -1.48
LSP1YPL004C TY1A-LR4P0C2I8 440 aaKnown RBP5.8□□□□□ -1.48
LSP1YPL004C TY1A-DR6P0CX70 440 aa5.8□□□□□ -1.48
LSP1YPL004C TY1A-ER1P0CX71 440 aa5.8□□□□□ -1.48
LSP1YPL004C TY1A-LR2P0CX72 440 aa5.8□□□□□ -1.48
LSP1YPL004C TY1A-PLP0CX73 440 aa5.8□□□□□ -1.48
LSP1YPL004C TY1A-JR1P0CX74 440 aa5.8□□□□□ -1.48
LSP1YPL004C TY1A-LR3P0CX75 440 aa5.8□□□□□ -1.48
LSP1YPL004C TY1A-ML2P0CX76 440 aa5.8□□□□□ -1.48
LSP1YPL004C YGL010WP25338 174 aa5.8□□□□□ -1.48
LSP1YPL004C YHR140WP38842 239 aa5.8□□□□□ -1.48
LSP1YPL004C VMA21P41806 77 aa5.8□□□□□ -1.48
LSP1YPL004C TY1A-GR1Q12085 440 aa5.8□□□□□ -1.48
LSP1YPL004C TY1A-PR3Q6Q5H1 440 aaKnown RBP5.8□□□□□ -1.48
LSP1YPL004C TY1A-OLQ92392 440 aaKnown RBP5.8□□□□□ -1.48
LSP1YPL004C RPL27AP0C2H6 136 aaKnown RBP5.79□□□□□ -1.48
LSP1YPL004C CUP2P15315 225 aa5.79□□□□□ -1.48
LSP1YPL004C ELF1P36053 145 aa5.79□□□□□ -1.48
LSP1YPL004C DAN1P47178 298 aa5.79□□□□□ -1.48
LSP1YPL004C YNR034W-AQ3E841 98 aa5.79□□□□□ -1.48
LSP1YPL004C MRPL28P36527 147 aa5.78□□□□□ -1.48
LSP1YPL004C PAU7P39545 55 aa5.78□□□□□ -1.48
LSP1YPL004C RPR2P40571 144 aa5.78□□□□□ -1.48
LSP1YPL004C PAU5P43575 122 aa5.78□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 72.6 ms