RNA–Protein interactions for RNA: YOR340C

RPA43, Transcript of RNA polymerase I subunit A43, yeastyeast

Gene RPA43, Length 981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA43YOR340C DOG2P38773 246 aa2.46□□□□□ -2.02
RPA43YOR340C DOG1P38774 246 aa2.46□□□□□ -2.02
RPA43YOR340C YER137CP40083 148 aaKnown RBP2.46□□□□□ -2.02
RPA43YOR340C YNL194CP40169 301 aa2.46□□□□□ -2.02
RPA43YOR340C MRPL49P40858 161 aaPredicted RBP2.46□□□□□ -2.02
RPA43YOR340C YJR015WP47090 510 aa2.46□□□□□ -2.02
RPA43YOR340C ERG25P53045 309 aa2.46□□□□□ -2.02
RPA43YOR340C CAB4P53332 305 aa2.46□□□□□ -2.02
RPA43YOR340C HST4P53688 370 aa2.46□□□□□ -2.02
RPA43YOR340C PDR17P53844 350 aa2.46□□□□□ -2.02
RPA43YOR340C YMR090WQ04304 227 aaKnown RBP2.46□□□□□ -2.02
RPA43YOR340C GRH1Q04410 372 aaKnown RBP2.46□□□□□ -2.02
RPA43YOR340C GTO3Q04806 366 aa2.46□□□□□ -2.02
RPA43YOR340C YNG1Q08465 219 aa2.46□□□□□ -2.02
RPA43YOR340C RAD28Q12021 506 aa2.46□□□□□ -2.02
RPA43YOR340C YDL012CQ12489 107 aa2.46□□□□□ -2.02
RPA43YOR340C UTR5P32630 166 aa2.45□□□□□ -2.02
RPA43YOR340C EMP24P32803 203 aaKnown RBP2.45□□□□□ -2.02
RPA43YOR340C UPS2P35200 230 aa2.45□□□□□ -2.02
RPA43YOR340C SHB17P36136 271 aaKnown RBP2.45□□□□□ -2.02
RPA43YOR340C ECM33P38248 429 aaKnown RBP2.45□□□□□ -2.02
RPA43YOR340C DID2P69771 204 aa2.45□□□□□ -2.02
RPA43YOR340C ATG39Q06159 398 aa2.45□□□□□ -2.02
RPA43YOR340C SNU23Q12368 194 aaPredicted RBP2.45□□□□□ -2.02
RPA43YOR340C YHR213W-AQ8TGT4 77 aa2.45□□□□□ -2.02
RPA43YOR340C CDC7P06243 507 aa2.44□□□□□ -2.02
RPA43YOR340C YKL075CP36083 450 aa2.44□□□□□ -2.02
RPA43YOR340C NRG2P38082 220 aa2.44□□□□□ -2.02
RPA43YOR340C RRT1P38192 103 aa2.44□□□□□ -2.02
RPA43YOR340C LSM2P38203 95 aaKnown RBP2.44□□□□□ -2.02
RPA43YOR340C RPL13BP40212 199 aaKnown RBP2.44□□□□□ -2.02
RPA43YOR340C IMP2P46972 177 aa2.44□□□□□ -2.02
RPA43YOR340C YDR274CP87283 123 aa2.44□□□□□ -2.02
RPA43YOR340C YMR007WQ03675 126 aa2.44□□□□□ -2.02
RPA43YOR340C SHH3Q04487 196 aa2.44□□□□□ -2.02
RPA43YOR340C ANT1Q06497 328 aa2.44□□□□□ -2.02
RPA43YOR340C RPL13AQ12690 199 aaPredicted RBP2.44□□□□□ -2.02
RPA43YOR340C GCN3P14741 305 aa2.43□□□□□ -2.02
RPA43YOR340C AHT1P29589 182 aa2.43□□□□□ -2.02
RPA43YOR340C YRA2P36036 203 aaKnown RBP RIP-Chip data2.43□□□□□ -2.02not detected
RPA43YOR340C MPC2P38857 129 aa2.43□□□□□ -2.02
RPA43YOR340C YEA4P40004 342 aa2.43□□□□□ -2.02
RPA43YOR340C SWM2P40342 146 aa2.43□□□□□ -2.02
RPA43YOR340C HAM1P47119 197 aaKnown RBP2.43□□□□□ -2.02
RPA43YOR340C AVO2Q04749 426 aa2.43□□□□□ -2.02
RPA43YOR340C AGC1Q12482 902 aa2.43□□□□□ -2.02
RPA43YOR340C YDR157WA0A023PZE8 133 aa2.42□□□□□ -2.02
RPA43YOR340C SPO13P23624 291 aa2.42□□□□□ -2.02
RPA43YOR340C FPR2P32472 135 aa2.42□□□□□ -2.02
RPA43YOR340C SRL3P36167 246 aa2.42□□□□□ -2.02
RPA43YOR340C SFT2P38166 215 aa2.42□□□□□ -2.02
RPA43YOR340C HUA1P40325 198 aa2.42□□□□□ -2.02
RPA43YOR340C POR2P40478 281 aa2.42□□□□□ -2.02
RPA43YOR340C TDA4P47153 279 aa2.42□□□□□ -2.02
RPA43YOR340C MIC26P50087 233 aa2.42□□□□□ -2.02
RPA43YOR340C MIC27P50945 234 aa2.42□□□□□ -2.02
RPA43YOR340C JAC1P53193 184 aa2.42□□□□□ -2.02
RPA43YOR340C YOL160WQ08321 113 aa2.42□□□□□ -2.02
RPA43YOR340C PRM7Q12459 698 aa2.42□□□□□ -2.02
RPA43YOR340C YBL112CQ3E7Y4 105 aa2.42□□□□□ -2.02
RPA43YOR340C YOR011W-AQ3E807 68 aa2.42□□□□□ -2.02
RPA43YOR340C MAG1P22134 296 aaKnown RBP2.41□□□□□ -2.02
RPA43YOR340C SDH4P37298 181 aa2.41□□□□□ -2.02
RPA43YOR340C DER1P38307 211 aa2.41□□□□□ -2.02
RPA43YOR340C RTC3P38804 111 aaPredicted RBP2.41□□□□□ -2.02
RPA43YOR340C SUR2P38992 349 aa2.41□□□□□ -2.02
RPA43YOR340C GCV3P39726 170 aaPredicted RBP2.41□□□□□ -2.02
RPA43YOR340C YIL059CP40520 121 aa2.41□□□□□ -2.02
RPA43YOR340C YFR045WP43617 309 aa2.41□□□□□ -2.02
RPA43YOR340C YJL028WP47062 111 aa2.41□□□□□ -2.02
RPA43YOR340C RDS3Q06835 107 aaPredicted RBP2.41□□□□□ -2.02
RPA43YOR340C YOR015WQ12169 119 aa2.41□□□□□ -2.02
RPA43YOR340C TIM22Q12328 207 aa2.41□□□□□ -2.02
RPA43YOR340C CMC2Q3E7A4 109 aa2.41□□□□□ -2.02
RPA43YOR340C UBI4P0CG63 381 aaKnown RBP2.4□□□□□ -2.03
RPA43YOR340C TRS20P38334 175 aa2.4□□□□□ -2.03
RPA43YOR340C SNF11P38956 169 aa2.4□□□□□ -2.03
RPA43YOR340C YFR035CP43608 114 aa2.4□□□□□ -2.03
RPA43YOR340C GPI2P46961 280 aa2.4□□□□□ -2.03
RPA43YOR340C DSK2P48510 373 aa2.4□□□□□ -2.03
RPA43YOR340C YGL034CP53186 121 aa2.4□□□□□ -2.03
RPA43YOR340C PLP1Q04004 230 aa2.4□□□□□ -2.03
RPA43YOR340C SDH7Q04401 133 aa2.4□□□□□ -2.03
RPA43YOR340C COA4Q05809 96 aa2.4□□□□□ -2.03
RPA43YOR340C YLR179CQ06252 201 aaKnown RBP2.4□□□□□ -2.03
RPA43YOR340C FCF2Q12035 217 aaPredicted RBP2.4□□□□□ -2.03
RPA43YOR340C YBL008W-AQ3E821 79 aa2.4□□□□□ -2.03
RPA43YOR340C ISD11Q6Q560 94 aa2.4□□□□□ -2.03
RPA43YOR340C DDI2P0CH63 225 aa2.39□□□□□ -2.03
RPA43YOR340C DDI3P0CH64 225 aa2.39□□□□□ -2.03
RPA43YOR340C VMA22P38784 181 aa2.39□□□□□ -2.03
RPA43YOR340C YER135CP40082 130 aa2.39□□□□□ -2.03
RPA43YOR340C OST3P48439 350 aa2.39□□□□□ -2.03
RPA43YOR340C ALG13P53178 202 aa2.39□□□□□ -2.03
RPA43YOR340C ORM1P53224 222 aa2.39□□□□□ -2.03
RPA43YOR340C TOM7P53507 60 aa2.39□□□□□ -2.03
RPA43YOR340C YIP3P53633 176 aa2.39□□□□□ -2.03
RPA43YOR340C FYV6P53913 173 aa2.39□□□□□ -2.03
RPA43YOR340C FIT2Q08906 153 aa2.39□□□□□ -2.03
RPA43YOR340C YPR063CQ12160 140 aa2.39□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 58.5 ms