RNA–Protein interactions for RNA: YOR036W

PEP12, Transcript of Target membrane receptor (t-SNARE), yeastyeast

Gene PEP12, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP12YOR036W MPC1P53157 130 aaKnown RBP1.3□□□□□ -2.2
PEP12YOR036W AIM36Q03798 255 aa1.3□□□□□ -2.2
PEP12YOR036W AVO2Q04749 426 aa1.3□□□□□ -2.2
PEP12YOR036W RAF1Q06891 181 aa1.3□□□□□ -2.2
PEP12YOR036W YOR385WQ08909 290 aa1.3□□□□□ -2.2
PEP12YOR036W TOP2P06786 1428 aaKnown RBP1.3□□□□□ -2.2
PEP12YOR036W KIN28P06242 306 aa1.29□□□□□ -2.2
PEP12YOR036W YHR212W-AP0CX91 67 aa1.29□□□□□ -2.2
PEP12YOR036W SAE3P89114 91 aa1.29□□□□□ -2.2
PEP12YOR036W SOM1Q05676 74 aa1.29□□□□□ -2.2
PEP12YOR036W LDB18Q07887 179 aa1.29□□□□□ -2.2
PEP12YOR036W YPR203WQ08994 102 aa1.29□□□□□ -2.2
PEP12YOR036W HUT1Q12520 339 aa1.29□□□□□ -2.2
PEP12YOR036W CMC4Q3E7A9 73 aa1.29□□□□□ -2.2
PEP12YOR036W KTI11Q3E840 82 aa1.29□□□□□ -2.2
PEP12YOR036W REV3P14284 1504 aa1.29□□□□□ -2.2
PEP12YOR036W TY1B-GR3Q12316 1755 aa1.29□□□□□ -2.2
PEP12YOR036W TY1B-ORQ92393 1755 aa1.29□□□□□ -2.2
PEP12YOR036W YLR422WQ06409 1932 aa1.28□□□□□ -2.2
PEP12YOR036W RPB11P38902 120 aa1.28□□□□□ -2.2
PEP12YOR036W YAL064WP39711 94 aa1.28□□□□□ -2.2
PEP12YOR036W YEL014CP39999 101 aa1.28□□□□□ -2.2
PEP12YOR036W YCL001W-AP87012 153 aa1.28□□□□□ -2.2
PEP12YOR036W RUB1Q03919 77 aa1.28□□□□□ -2.2
PEP12YOR036W YPR153WQ06537 140 aa1.28□□□□□ -2.2
PEP12YOR036W YOR289WQ12012 251 aaPredicted RBP1.28□□□□□ -2.2
PEP12YOR036W BUD4P47136 1447 aa1.28□□□□□ -2.2
PEP12YOR036W TY1B-DR5P0C2I2 1755 aa1.28□□□□□ -2.2
PEP12YOR036W TY1B-DR6P0C2I3 1755 aa1.28□□□□□ -2.2
PEP12YOR036W TY1B-LR2P0C2I5 1755 aa1.28□□□□□ -2.2
PEP12YOR036W TY1B-LR3P0C2I6 1755 aaKnown RBP1.28□□□□□ -2.2
PEP12YOR036W TY1B-PR1P0C2I9 1755 aaKnown RBP1.28□□□□□ -2.2
PEP12YOR036W TY1B-PR3P0C2J1 1755 aaKnown RBP1.28□□□□□ -2.2
PEP12YOR036W TY1B-JR1P47098 1755 aa1.28□□□□□ -2.2
PEP12YOR036W TY1B-ML2Q03434 1755 aaKnown RBP1.28□□□□□ -2.2
PEP12YOR036W TY1B-ER1Q03612 1755 aa1.28□□□□□ -2.2
PEP12YOR036W TY1B-ML1Q04711 1755 aaKnown RBP1.28□□□□□ -2.2
PEP12YOR036W TY1B-GR2Q12269 1755 aa1.28□□□□□ -2.2
PEP12YOR036W TY1B-OLQ12273 1755 aa1.28□□□□□ -2.2
PEP12YOR036W TY1B-PLQ12414 1755 aaKnown RBP1.28□□□□□ -2.2
PEP12YOR036W FAS1P07149 2051 aaKnown RBP1.28□□□□□ -2.2
PEP12YOR036W TY1B-JR2P47100 1755 aaKnown RBP1.27□□□□□ -2.21
PEP12YOR036W TY1B-ER2Q03619 1755 aa1.27□□□□□ -2.21
PEP12YOR036W TY1B-MR1Q04214 1755 aa1.27□□□□□ -2.21
PEP12YOR036W TY1B-MR2Q04670 1755 aaKnown RBP1.27□□□□□ -2.21
PEP12YOR036W TY1B-LR1Q12088 1755 aaKnown RBP1.27□□□□□ -2.21
PEP12YOR036W TY1B-NL1Q12112 1755 aa1.27□□□□□ -2.21
PEP12YOR036W TY1B-GR1Q12141 1755 aa1.27□□□□□ -2.21
PEP12YOR036W TY1B-BLQ12490 1755 aa1.27□□□□□ -2.21
PEP12YOR036W MDS3P53094 1487 aa1.27□□□□□ -2.21
PEP12YOR036W SNT2P53127 1403 aa1.27□□□□□ -2.21
PEP12YOR036W COX5BP00425 151 aa1.27□□□□□ -2.21
PEP12YOR036W NMT1P14743 455 aa1.27□□□□□ -2.21
PEP12YOR036W MRPL44P19956 98 aa1.27□□□□□ -2.21
PEP12YOR036W FYV5P25585 152 aa1.27□□□□□ -2.21
PEP12YOR036W QCR10P37299 77 aa1.27□□□□□ -2.21
PEP12YOR036W FIT1Q04433 528 aa1.27□□□□□ -2.21
PEP12YOR036W FCF2Q12035 217 aaPredicted RBP1.27□□□□□ -2.21
PEP12YOR036W ESC1Q03661 1658 aaKnown RBP1.26□□□□□ -2.21
PEP12YOR036W MON2P48563 1636 aaPredicted RBP1.26□□□□□ -2.21
PEP12YOR036W MYO2P19524 1574 aaKnown RBP1.26□□□□□ -2.21
PEP12YOR036W TRM732Q03496 1420 aa1.26□□□□□ -2.21
PEP12YOR036W PRE1P22141 198 aaKnown RBP1.26□□□□□ -2.21
PEP12YOR036W YCR101CP25607 182 aa1.26□□□□□ -2.21
PEP12YOR036W HSP150P32478 413 aa1.26□□□□□ -2.21
PEP12YOR036W GSP1P32835 219 aaKnown RBP1.26□□□□□ -2.21
PEP12YOR036W UTP11P34247 250 aaPredicted RBP1.26□□□□□ -2.21
PEP12YOR036W IPT1P38954 527 aa1.26□□□□□ -2.21
PEP12YOR036W RGI1P40043 161 aaPredicted RBP1.26□□□□□ -2.21
PEP12YOR036W NAT5Q08689 176 aa1.26□□□□□ -2.21
PEP12YOR036W TY1B-NL2Q99337 1749 aaKnown RBP1.26□□□□□ -2.21
PEP12YOR036W HSL1P34244 1518 aa1.25□□□□□ -2.21
PEP12YOR036W TSC11P40061 1430 aa1.25□□□□□ -2.21
PEP12YOR036W UBR1P19812 1950 aa1.25□□□□□ -2.21
PEP12YOR036W ADK1P07170 222 aaKnown RBP1.25□□□□□ -2.21
PEP12YOR036W ANB1P19211 157 aa1.25□□□□□ -2.21
PEP12YOR036W ECM31P38122 312 aa1.25□□□□□ -2.21
PEP12YOR036W GPI11Q06636 219 aa1.25□□□□□ -2.21
PEP12YOR036W YLR042CQ07990 161 aa1.25□□□□□ -2.21
PEP12YOR036W TCB3Q03640 1545 aaKnown RBP1.25□□□□□ -2.21
PEP12YOR036W YER039C-AP0CD97 72 aa1.24□□□□□ -2.21
PEP12YOR036W LHP1P33399 275 aaKnown RBP1.24□□□□□ -2.21
PEP12YOR036W SRL3P36167 246 aa1.24□□□□□ -2.21
PEP12YOR036W YHL037CP38733 133 aa1.24□□□□□ -2.21
PEP12YOR036W BRP1P53194 125 aa1.24□□□□□ -2.21
PEP12YOR036W YOR097CQ12274 175 aaPredicted RBP1.24□□□□□ -2.21
PEP12YOR036W YKL068W-AQ3E826 78 aa1.24□□□□□ -2.21
PEP12YOR036W MYO4P32492 1471 aa1.24□□□□□ -2.21
PEP12YOR036W SPP41P38904 1435 aa1.23□□□□□ -2.21
PEP12YOR036W YSP2Q06681 1438 aa1.23□□□□□ -2.21
PEP12YOR036W PAU21P0CE86 164 aa1.23□□□□□ -2.21
PEP12YOR036W PAU22P0CE87 164 aa1.23□□□□□ -2.21
PEP12YOR036W SEC59P20048 519 aa1.23□□□□□ -2.21
PEP12YOR036W YCR099CP25657 155 aa1.23□□□□□ -2.21
PEP12YOR036W ATG8P38182 117 aaRIP-Chip data1.23□□□□□ -2.21not detected
PEP12YOR036W HSP10P38910 106 aa1.23□□□□□ -2.21
PEP12YOR036W PAM16P42949 149 aa1.23□□□□□ -2.21
PEP12YOR036W DCV1P43595 202 aa1.23□□□□□ -2.21
PEP12YOR036W RPS12P48589 143 aaKnown RBP1.23□□□□□ -2.21
PEP12YOR036W ERV14P53173 138 aa1.23□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 45.6 ms