RNA–Protein interactions for RNA: YNL330C

RPD3, Transcript of Histone deacetylase, component of both the Rpd3S and Rpd3L complexes, yeastyeast

Gene RPD3, Length 1,302 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPD3YNL330C YPL278CQ08990 100 aa6.98□□□□□ -1.29
RPD3YNL330C YHR213WP0CI67 198 aa6.97□□□□□ -1.29
RPD3YNL330C SPC29P33419 253 aa6.97□□□□□ -1.29
RPD3YNL330C YER188WP40103 239 aa6.97□□□□□ -1.29
RPD3YNL330C THG1P53215 237 aaKnown RBP6.97□□□□□ -1.29
RPD3YNL330C JID1Q12350 301 aa6.97□□□□□ -1.29
RPD3YNL330C YPS1P32329 569 aa6.96□□□□□ -1.3
RPD3YNL330C IMP2P46972 177 aa6.96□□□□□ -1.3
RPD3YNL330C POP3P53833 195 aaPredicted RBP6.96□□□□□ -1.3
RPD3YNL330C YDR366CP87287 132 aa6.96□□□□□ -1.3
RPD3YNL330C GRH1Q04410 372 aaKnown RBP6.96□□□□□ -1.3
RPD3YNL330C GTO3Q04806 366 aa6.96□□□□□ -1.3
RPD3YNL330C DPP1Q05521 289 aa6.96□□□□□ -1.3
RPD3YNL330C TIM18Q08749 192 aa6.96□□□□□ -1.3
RPD3YNL330C UTP23Q12339 254 aaKnown RBP6.96□□□□□ -1.3
RPD3YNL330C ATO3Q12359 275 aa6.96□□□□□ -1.3
RPD3YNL330C YCL048W-AQ2V2Q2 79 aa6.96□□□□□ -1.3
RPD3YNL330C YPR170W-BP0C5R9 85 aa6.95□□□□□ -1.3
RPD3YNL330C MBB1P39534 108 aa6.95□□□□□ -1.3
RPD3YNL330C YPI1P43587 155 aa6.95□□□□□ -1.3
RPD3YNL330C YGL260WP53056 76 aa6.95□□□□□ -1.3
RPD3YNL330C YNL234WP53857 426 aa6.94□□□□□ -1.3
RPD3YNL330C SUR7P54003 302 aa6.94□□□□□ -1.3
RPD3YNL330C SNA4Q07549 140 aa6.94□□□□□ -1.3
RPD3YNL330C SCS22Q6Q595 175 aa6.94□□□□□ -1.3
RPD3YNL330C YMR141CP40211 102 aa6.93□□□□□ -1.3
RPD3YNL330C COX16P47081 118 aa6.93□□□□□ -1.3
RPD3YNL330C SWT21P53873 357 aaPredicted RBP6.93□□□□□ -1.3
RPD3YNL330C ADH6Q04894 360 aaKnown RBP6.93□□□□□ -1.3
RPD3YNL330C MSC3Q05812 728 aa6.93□□□□□ -1.3
RPD3YNL330C YLR342W-AQ3E810 57 aa6.93□□□□□ -1.3
RPD3YNL330C RPL27AP0C2H6 136 aaKnown RBP6.92□□□□□ -1.3
RPD3YNL330C RPL12AP0CX53 165 aaKnown RBP6.92□□□□□ -1.3
RPD3YNL330C RPL12BP0CX54 165 aa6.92□□□□□ -1.3
RPD3YNL330C MRPL38P35996 138 aaPredicted RBP6.92□□□□□ -1.3
RPD3YNL330C MIC26P50087 233 aa6.92□□□□□ -1.3
RPD3YNL330C UBC7Q02159 165 aa6.92□□□□□ -1.3
RPD3YNL330C BET5Q03630 159 aa6.92□□□□□ -1.3
RPD3YNL330C PHO85P17157 305 aa6.91□□□□□ -1.3
RPD3YNL330C CPT1P17898 393 aa6.91□□□□□ -1.3
RPD3YNL330C MRP49P32388 137 aa6.91□□□□□ -1.3
RPD3YNL330C YKR070WP36151 352 aaKnown RBP6.91□□□□□ -1.3
RPD3YNL330C YJL027CP47063 138 aaPredicted RBP6.91□□□□□ -1.3
RPD3YNL330C VPS71Q03433 280 aa6.91□□□□□ -1.3
RPD3YNL330C YIL002W-AQ3E7Z5 69 aa6.91□□□□□ -1.3
RPD3YNL330C ELF1P36053 145 aa6.9□□□□□ -1.3
RPD3YNL330C GPP2P40106 250 aaKnown RBP6.9□□□□□ -1.3
RPD3YNL330C SBH2P52871 88 aa6.9□□□□□ -1.3
RPD3YNL330C YGR017WP53210 297 aa6.9□□□□□ -1.3
RPD3YNL330C YML079WQ03629 201 aa6.9□□□□□ -1.3
RPD3YNL330C FCY1Q12178 158 aa6.9□□□□□ -1.3
RPD3YNL330C YLR363W-AQ3E747 85 aa6.9□□□□□ -1.3
RPD3YNL330C TOR2P32600 2474 aaKnown RBP6.9□□□□□ -1.31
RPD3YNL330C IRA2P19158 3079 aa6.89□□□□□ -1.31
RPD3YNL330C MBF1O14467 151 aaKnown RBP6.89□□□□□ -1.31
RPD3YNL330C PRE1P22141 198 aaKnown RBP6.89□□□□□ -1.31
RPD3YNL330C RPF1P38805 295 aaKnown RBP6.89□□□□□ -1.31
RPD3YNL330C GLE2P40066 365 aa6.89□□□□□ -1.31
RPD3YNL330C MST27P53176 234 aa6.89□□□□□ -1.31
RPD3YNL330C RPL27BP0C2H7 136 aaKnown RBP6.88□□□□□ -1.31
RPD3YNL330C ERS1P17261 260 aa6.88□□□□□ -1.31
RPD3YNL330C APS1P35181 156 aa6.88□□□□□ -1.31
RPD3YNL330C NCA3P46955 337 aa6.88□□□□□ -1.31
RPD3YNL330C YIL014C-AQ02598 104 aa6.88□□□□□ -1.31
RPD3YNL330C YDR042CQ03205 200 aa6.88□□□□□ -1.31
RPD3YNL330C GPI19Q04082 140 aa6.88□□□□□ -1.31
RPD3YNL330C PBP4Q07362 185 aaKnown RBP6.88□□□□□ -1.31
RPD3YNL330C IRC23Q08416 157 aa6.88□□□□□ -1.31
RPD3YNL330C YHR140WP38842 239 aa6.87□□□□□ -1.31
RPD3YNL330C BNA1P47096 177 aa6.87□□□□□ -1.31
RPD3YNL330C YJR096WP47137 282 aa6.87□□□□□ -1.31
RPD3YNL330C SUT1P53032 299 aaKnown RBP6.87□□□□□ -1.31
RPD3YNL330C ADH2P00331 348 aaKnown RBP6.86□□□□□ -1.31
RPD3YNL330C YCR023CP25351 611 aa6.86□□□□□ -1.31
RPD3YNL330C YKL044WP36092 106 aa6.86□□□□□ -1.31
RPD3YNL330C PET8P38921 284 aa6.86□□□□□ -1.31
RPD3YNL330C SNU13P39990 126 aaKnown RBP6.86□□□□□ -1.31
RPD3YNL330C POR2P40478 281 aa6.86□□□□□ -1.31
RPD3YNL330C RPL15BP54780 204 aaPredicted RBP6.86□□□□□ -1.31
RPD3YNL330C TIM22Q12328 207 aa6.86□□□□□ -1.31
RPD3YNL330C CMC1P36064 111 aa6.85□□□□□ -1.31
RPD3YNL330C YHL044WP38727 235 aa6.85□□□□□ -1.31
RPD3YNL330C ATG39Q06159 398 aa6.85□□□□□ -1.31
RPD3YNL330C IZH3Q07959 543 aa6.85□□□□□ -1.31
RPD3YNL330C IRA1P18963 3092 aa6.85□□□□□ -1.31
RPD3YNL330C SAL1D6W196 494 aa6.84□□□□□ -1.31
RPD3YNL330C SPS100P13130 326 aa6.84□□□□□ -1.31
RPD3YNL330C YKR032WP36127 104 aa6.84□□□□□ -1.31
RPD3YNL330C YIL012WP40551 113 aa6.84□□□□□ -1.31
RPD3YNL330C CAB4P53332 305 aa6.84□□□□□ -1.31
RPD3YNL330C GEP3Q08622 556 aa6.84□□□□□ -1.31
RPD3YNL330C AIM29P36154 155 aa6.83□□□□□ -1.32
RPD3YNL330C YGR219WP53307 113 aa6.83□□□□□ -1.32
RPD3YNL330C MGR2Q02889 113 aa6.83□□□□□ -1.32
RPD3YNL330C YOL160WQ08321 113 aa6.83□□□□□ -1.32
RPD3YNL330C ANB1P19211 157 aa6.82□□□□□ -1.32
RPD3YNL330C SNF11P38956 169 aa6.82□□□□□ -1.32
RPD3YNL330C DIA1P54005 336 aa6.82□□□□□ -1.32
RPD3YNL330C RUB1Q03919 77 aa6.82□□□□□ -1.32
RPD3YNL330C PFY1P07274 126 aa6.81□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 28.6 ms