RNA–Protein interactions for RNA: YNL257C

SIP3, Transcript of Transcription cofactor, yeastyeast

Gene SIP3, Length 3,690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIP3YNL257C YER134CP40081 178 aa1.87□□□□□ -2.11
SIP3YNL257C RPL13BP40212 199 aaKnown RBP1.87□□□□□ -2.11
SIP3YNL257C HPT1Q04178 221 aaKnown RBP1.87□□□□□ -2.11
SIP3YNL257C HNT1Q04344 158 aaKnown RBP1.87□□□□□ -2.11
SIP3YNL257C UPS1Q05776 175 aa1.87□□□□□ -2.11
SIP3YNL257C NAT3Q06504 195 aa1.87□□□□□ -2.11
SIP3YNL257C NIP7Q08962 181 aaKnown RBP1.87□□□□□ -2.11
SIP3YNL257C SEC4P07560 215 aaKnown RBP1.86□□□□□ -2.11
SIP3YNL257C TRX3P25372 127 aa1.86□□□□□ -2.11
SIP3YNL257C RPB7P34087 171 aa1.86□□□□□ -2.11
SIP3YNL257C YBR220CP38318 560 aa1.86□□□□□ -2.11
SIP3YNL257C ECM14P38836 430 aa1.86□□□□□ -2.11
SIP3YNL257C IRC22P40006 225 aa1.86□□□□□ -2.11
SIP3YNL257C TTI2P47168 421 aa1.86□□□□□ -2.11
SIP3YNL257C EFG1Q3E705 233 aaKnown RBP1.86□□□□□ -2.11
SIP3YNL257C TAO3P40468 2376 aa1.86□□□□□ -2.11
SIP3YNL257C RAS2P01120 322 aaKnown RBP1.86□□□□□ -2.11
SIP3YNL257C MDH2P22133 377 aa1.86□□□□□ -2.11
SIP3YNL257C SNF11P38956 169 aa1.86□□□□□ -2.11
SIP3YNL257C ATG10Q07879 167 aa1.86□□□□□ -2.11
SIP3YNL257C ATO3Q12359 275 aa1.86□□□□□ -2.11
SIP3YNL257C YIR021W-AQ3E739 70 aa1.86□□□□□ -2.11
SIP3YNL257C OCH1P31755 480 aa1.86□□□□□ -2.11
SIP3YNL257C RPL14AP36105 138 aaKnown RBP1.86□□□□□ -2.11
SIP3YNL257C RPL14BP38754 138 aaKnown RBP1.86□□□□□ -2.11
SIP3YNL257C YER076CP40049 302 aa1.86□□□□□ -2.11
SIP3YNL257C YIL059CP40520 121 aa1.86□□□□□ -2.11
SIP3YNL257C RCE1Q03530 315 aa1.86□□□□□ -2.11
SIP3YNL257C THI74Q04083 370 aa1.86□□□□□ -2.11
SIP3YNL257C YDR391CQ04170 232 aa1.86□□□□□ -2.11
SIP3YNL257C FSF1Q12029 327 aaKnown RBP1.86□□□□□ -2.11
SIP3YNL257C RDI1Q12434 202 aa1.86□□□□□ -2.11
SIP3YNL257C YKL023C-AQ2V2P3 75 aa1.86□□□□□ -2.11
SIP3YNL257C QCR2P07257 368 aa1.85□□□□□ -2.11
SIP3YNL257C SPS18P32572 300 aa1.85□□□□□ -2.11
SIP3YNL257C BXI1P48558 297 aa1.85□□□□□ -2.11
SIP3YNL257C PAU4P53427 120 aa1.85□□□□□ -2.11
SIP3YNL257C COX5BP00425 151 aa1.85□□□□□ -2.11
SIP3YNL257C AME1P38313 324 aa1.85□□□□□ -2.11
SIP3YNL257C RPF1P38805 295 aaKnown RBP1.85□□□□□ -2.11
SIP3YNL257C SNU13P39990 126 aaKnown RBP1.85□□□□□ -2.11
SIP3YNL257C BAT2P47176 376 aaKnown RBP1.85□□□□□ -2.11
SIP3YNL257C SBH2P52871 88 aa1.85□□□□□ -2.11
SIP3YNL257C YPL162CQ12042 273 aa1.85□□□□□ -2.11
SIP3YNL257C YDL022C-AP0C5L6 82 aa1.85□□□□□ -2.11
SIP3YNL257C GON7P46984 123 aa1.85□□□□□ -2.11
SIP3YNL257C GPI14P47088 403 aaKnown RBP1.85□□□□□ -2.11
SIP3YNL257C HHT1P61830 136 aa1.85□□□□□ -2.11
SIP3YNL257C YDR366CP87287 132 aa1.85□□□□□ -2.11
SIP3YNL257C DGA1Q08650 418 aa1.85□□□□□ -2.11
SIP3YNL257C IRA1P18963 3092 aa1.84□□□□□ -2.11
SIP3YNL257C HAP3P13434 144 aa1.84□□□□□ -2.11
SIP3YNL257C SHE2P36068 246 aaKnown RBP RIP-Chip data1.84□□□□□ -2.11not detected
SIP3YNL257C SPG3Q04398 127 aaPredicted RBP1.84□□□□□ -2.11
SIP3YNL257C GRH1Q04410 372 aaKnown RBP1.84□□□□□ -2.11
SIP3YNL257C ATG40Q99325 256 aa1.84□□□□□ -2.11
SIP3YNL257C UPS2P35200 230 aa1.84□□□□□ -2.12
SIP3YNL257C MOB1P40484 314 aa1.84□□□□□ -2.12
SIP3YNL257C GPI2P46961 280 aa1.84□□□□□ -2.12
SIP3YNL257C ARP3P47117 449 aaKnown RBP1.84□□□□□ -2.12
SIP3YNL257C LPP1Q04396 274 aa1.84□□□□□ -2.12
SIP3YNL257C GIM5Q04493 163 aa1.84□□□□□ -2.12
SIP3YNL257C RPS28BP0C0X0 67 aaKnown RBP1.84□□□□□ -2.12
SIP3YNL257C RPL27AP0C2H6 136 aaKnown RBP1.84□□□□□ -2.12
SIP3YNL257C RPL27BP0C2H7 136 aaKnown RBP1.84□□□□□ -2.12
SIP3YNL257C MRP49P32388 137 aa1.84□□□□□ -2.12
SIP3YNL257C SSU72P53538 206 aaPredicted RBP1.84□□□□□ -2.12
SIP3YNL257C PKR1Q03880 122 aaKnown RBP1.84□□□□□ -2.12
SIP3YNL257C USB1Q12208 290 aaKnown RBP1.84□□□□□ -2.12
SIP3YNL257C YDR119W-AQ2V2P9 66 aa1.84□□□□□ -2.12
SIP3YNL257C YLR361C-AQ3E795 98 aa1.84□□□□□ -2.12
SIP3YNL257C RPS28AQ3E7X9 67 aaPredicted RBP1.84□□□□□ -2.12
SIP3YNL257C THG1P53215 237 aaKnown RBP1.83□□□□□ -2.12
SIP3YNL257C YPR195CQ06594 109 aa1.83□□□□□ -2.12
SIP3YNL257C YMR175W-AQ3E766 64 aa1.83□□□□□ -2.12
SIP3YNL257C HTL1Q9URQ5 78 aa1.83□□□□□ -2.12
SIP3YNL257C NOP1P15646 327 aaKnown RBP1.83□□□□□ -2.12
SIP3YNL257C YBR090CP38253 122 aa1.83□□□□□ -2.12
SIP3YNL257C YNL200CP40165 246 aaKnown RBP1.83□□□□□ -2.12
SIP3YNL257C ODC2Q99297 307 aa1.83□□□□□ -2.12
SIP3YNL257C PRP8P33334 2413 aaKnown RBP1.83□□□□□ -2.12
SIP3YNL257C APS1P35181 156 aa1.82□□□□□ -2.12
SIP3YNL257C PIR1Q03178 341 aa1.82□□□□□ -2.12
SIP3YNL257C YIL102C-AQ2V2P5 75 aa1.82□□□□□ -2.12
SIP3YNL257C YDR246W-AQ3E763 66 aa1.82□□□□□ -2.12
SIP3YNL257C Q0255P03881 472 aa1.82□□□□□ -2.12
SIP3YNL257C CPA1P07258 411 aaKnown RBP1.82□□□□□ -2.12
SIP3YNL257C CUP9P41817 306 aa1.82□□□□□ -2.12
SIP3YNL257C OST2P46964 130 aa1.82□□□□□ -2.12
SIP3YNL257C YOR015WQ12169 119 aa1.82□□□□□ -2.12
SIP3YNL257C UBC5P15732 148 aa1.82□□□□□ -2.12
SIP3YNL257C YGR050CP53231 118 aa1.82□□□□□ -2.12
SIP3YNL257C MET31Q03081 177 aa1.82□□□□□ -2.12
SIP3YNL257C HUT1Q12520 339 aa1.82□□□□□ -2.12
SIP3YNL257C YER039C-AP0CD97 72 aa1.81□□□□□ -2.12
SIP3YNL257C PAU1P0CE88 120 aa1.81□□□□□ -2.12
SIP3YNL257C PAU14P0CE89 120 aa1.81□□□□□ -2.12
SIP3YNL257C PAU6P0CE90 120 aa1.81□□□□□ -2.12
SIP3YNL257C PAU18P0CE91 120 aa1.81□□□□□ -2.12
SIP3YNL257C PAU8P0CE92 120 aa1.81□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms