RNA–Protein interactions for RNA: YNL101W

AVT4, Transcript of Vacuolar transporter, yeast

Gene AVT4, Length 2,142 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
AVT4	YNL101W	PET8	P38921	284 aa		5.27	□□□□□ -1.57
AVT4	YNL101W	TVP23	P38962	199 aa		5.27	□□□□□ -1.57
AVT4	YNL101W	YFR045W	P43617	309 aa		5.27	□□□□□ -1.57
AVT4	YNL101W	YFR057W	P43625	151 aa		5.27	□□□□□ -1.57
AVT4	YNL101W	AIM34	Q03673	198 aa		5.27	□□□□□ -1.57
AVT4	YNL101W	ECM12	O13529	151 aa		5.27	□□□□□ -1.57
AVT4	YNL101W	MRS3	P10566	314 aa		5.27	□□□□□ -1.57
AVT4	YNL101W	YEL067C	P39978	195 aa		5.27	□□□□□ -1.57
AVT4	YNL101W	VEL1	P53058	206 aa		5.27	□□□□□ -1.57
AVT4	YNL101W	TOM7	P53507	60 aa		5.27	□□□□□ -1.57
AVT4	YNL101W	ATG33	Q06485	197 aa		5.27	□□□□□ -1.57
AVT4	YNL101W	RDL2	Q08742	149 aa	Known RBP	5.27	□□□□□ -1.57
AVT4	YNL101W	MET32	Q12041	191 aa		5.27	□□□□□ -1.57
AVT4	YNL101W	RAD6	P06104	172 aa		5.26	□□□□□ -1.57
AVT4	YNL101W	CDC26	P14724	124 aa		5.26	□□□□□ -1.57
AVT4	YNL101W	KTI12	P34253	313 aa	Known RBP	5.26	□□□□□ -1.57
AVT4	YNL101W	CSH1	P38287	376 aa		5.26	□□□□□ -1.57
AVT4	YNL101W	TIF34	P40217	347 aa	Known RBP	5.26	□□□□□ -1.57
AVT4	YNL101W	LCB3	P47013	409 aa		5.26	□□□□□ -1.57
AVT4	YNL101W	MRPL23	Q12487	163 aa	Predicted RBP	5.26	□□□□□ -1.57
AVT4	YNL101W	PIS1	P06197	220 aa	Known RBP	5.26	□□□□□ -1.57
AVT4	YNL101W	MRPL31	P14063	131 aa	Predicted RBP	5.26	□□□□□ -1.57
AVT4	YNL101W	YPS1	P32329	569 aa		5.26	□□□□□ -1.57
AVT4	YNL101W	VPS55	P47111	140 aa		5.26	□□□□□ -1.57
AVT4	YNL101W	ALG13	P53178	202 aa		5.26	□□□□□ -1.57
AVT4	YNL101W	ATP19	P81451	68 aa		5.26	□□□□□ -1.57
AVT4	YNL101W	YHP1	Q04116	353 aa		5.26	□□□□□ -1.57
AVT4	YNL101W	YMR103C	Q04436	120 aa		5.26	□□□□□ -1.57
AVT4	YNL101W	YMR317W	Q04893	1140 aa		5.26	□□□□□ -1.57
AVT4	YNL101W	RAF1	Q06891	181 aa		5.26	□□□□□ -1.57
AVT4	YNL101W	HTL1	Q9URQ5	78 aa		5.26	□□□□□ -1.57
AVT4	YNL101W	MDM10	P18409	493 aa		5.25	□□□□□ -1.57
AVT4	YNL101W	FHN1	P53279	174 aa		5.25	□□□□□ -1.57
AVT4	YNL101W	HST4	P53688	370 aa		5.25	□□□□□ -1.57
AVT4	YNL101W	YDR102C	Q03864	110 aa		5.25	□□□□□ -1.57
AVT4	YNL101W	RRG8	Q06109	277 aa		5.25	□□□□□ -1.57
AVT4	YNL101W	YRA1	Q12159	226 aa	Known RBP	5.25	□□□□□ -1.57
AVT4	YNL101W	RFM1	Q12192	310 aa		5.25	□□□□□ -1.57
AVT4	YNL101W	DSE2	P38844	325 aa		5.24	□□□□□ -1.57
AVT4	YNL101W	CAX4	P53223	239 aa		5.24	□□□□□ -1.57
AVT4	YNL101W	YCL021W-A	Q96VH3	125 aa		5.24	□□□□□ -1.57
AVT4	YNL101W	TIM23	P32897	222 aa		5.24	□□□□□ -1.57
AVT4	YNL101W	CIS3	P47001	227 aa		5.24	□□□□□ -1.57
AVT4	YNL101W	NCE101	Q02820	53 aa		5.24	□□□□□ -1.57
AVT4	YNL101W	COF1	Q03048	143 aa	Known RBP	5.24	□□□□□ -1.57
AVT4	YNL101W	YOR097C	Q12274	175 aa	Predicted RBP	5.24	□□□□□ -1.57
AVT4	YNL101W	IMP1	P28627	190 aa		5.23	□□□□□ -1.57
AVT4	YNL101W	MRPS5	P33759	307 aa		5.23	□□□□□ -1.57
AVT4	YNL101W	YHR140W	P38842	239 aa		5.23	□□□□□ -1.57
AVT4	YNL101W	YHR173C	P38864	112 aa		5.23	□□□□□ -1.57
AVT4	YNL101W	LTP1	P40347	161 aa		5.23	□□□□□ -1.57
AVT4	YNL101W	BLM10	P43583	2143 aa		5.23	□□□□□ -1.57
AVT4	YNL101W	YDL022C-A	P0C5L6	82 aa		5.23	□□□□□ -1.57
AVT4	YNL101W	HNT2	P49775	206 aa		5.23	□□□□□ -1.57
AVT4	YNL101W	YNR077C	P53758	84 aa		5.23	□□□□□ -1.57
AVT4	YNL101W	ABF2	Q02486	183 aa		5.23	□□□□□ -1.57
AVT4	YNL101W	LSM6	Q06406	86 aa	Known RBP	5.23	□□□□□ -1.57
AVT4	YNL101W	DAD1	Q12248	94 aa		5.23	□□□□□ -1.57
AVT4	YNL101W	CYR1	P08678	2026 aa	Known RBP	5.22	□□□□□ -1.57
AVT4	YNL101W	FIP1	P45976	327 aa		5.22	□□□□□ -1.57
AVT4	YNL101W	SBH1	P52870	82 aa		5.22	□□□□□ -1.57
AVT4	YNL101W	YHM2	Q04013	314 aa		5.22	□□□□□ -1.57
AVT4	YNL101W	RPL30	P14120	105 aa	Known RBP	5.21	□□□□□ -1.57
AVT4	YNL101W	ROX3	P25046	220 aa		5.21	□□□□□ -1.57
AVT4	YNL101W	YKR032W	P36127	104 aa		5.21	□□□□□ -1.57
AVT4	YNL101W	GPI18	P38211	433 aa		5.21	□□□□□ -1.57
AVT4	YNL101W	ADH5	P38113	351 aa	Known RBP	5.21	□□□□□ -1.58
AVT4	YNL101W	PAU7	P39545	55 aa		5.21	□□□□□ -1.58
AVT4	YNL101W	MRPL49	P40858	161 aa	Predicted RBP	5.21	□□□□□ -1.58
AVT4	YNL101W	SKI6	P46948	246 aa	Predicted RBP	5.21	□□□□□ -1.58
AVT4	YNL101W	GPI19	Q04082	140 aa		5.21	□□□□□ -1.58
AVT4	YNL101W	RXT3	Q07458	294 aa		5.21	□□□□□ -1.58
AVT4	YNL101W	BEM2	P39960	2167 aa	Known RBP	5.21	□□□□□ -1.58
AVT4	YNL101W	YHR139C-A	O13536	103 aa		5.2	□□□□□ -1.58
AVT4	YNL101W	YMR320W	Q04897	101 aa		5.2	□□□□□ -1.58
AVT4	YNL101W	YLR042C	Q07990	161 aa		5.2	□□□□□ -1.58
AVT4	YNL101W	FIT2	Q08906	153 aa		5.2	□□□□□ -1.58
AVT4	YNL101W	DAP1	Q12091	152 aa		5.2	□□□□□ -1.58
AVT4	YNL101W	VTC1	P40046	129 aa	RIP-Chip data	5.2	□□□□□ -1.58	not detected
AVT4	YNL101W	GON7	P46984	123 aa		5.2	□□□□□ -1.58
AVT4	YNL101W	RPL2A	P0CX45	254 aa	Known RBP	5.19	□□□□□ -1.58
AVT4	YNL101W	RPL2B	P0CX46	254 aa	Known RBP	5.19	□□□□□ -1.58
AVT4	YNL101W	HSP12	P22943	109 aa	Known RBP	5.19	□□□□□ -1.58
AVT4	YNL101W	YCR006C	P25350	157 aa		5.19	□□□□□ -1.58
AVT4	YNL101W	VHS2	P40463	436 aa		5.19	□□□□□ -1.58
AVT4	YNL101W	UPS1	Q05776	175 aa		5.19	□□□□□ -1.58
AVT4	YNL101W	SUT2	Q12286	268 aa		5.19	□□□□□ -1.58
AVT4	YNL101W	SEC16	P48415	2195 aa	Known RBP	5.19	□□□□□ -1.58
AVT4	YNL101W	Q0255	P03881	472 aa		5.18	□□□□□ -1.58
AVT4	YNL101W	YCR050C	P25630	102 aa		5.18	□□□□□ -1.58
AVT4	YNL101W	INO2	P26798	304 aa		5.18	□□□□□ -1.58
AVT4	YNL101W	YKL070W	P36087	169 aa		5.18	□□□□□ -1.58
AVT4	YNL101W	SMP1	P38128	452 aa		5.18	□□□□□ -1.58
AVT4	YNL101W	OST1	P41543	476 aa	Known RBP	5.18	□□□□□ -1.58
AVT4	YNL101W	YPL261C	Q08976	102 aa		5.18	□□□□□ -1.58
AVT4	YNL101W	ISF1	P32488	338 aa		5.18	□□□□□ -1.58
AVT4	YNL101W	FMP46	P36141	133 aa	Known RBP	5.18	□□□□□ -1.58
AVT4	YNL101W	MRPL19	P53875	158 aa		5.18	□□□□□ -1.58
AVT4	YNL101W	MIX14	Q04341	121 aa		5.18	□□□□□ -1.58
AVT4	YNL101W	IRC19	Q07843	230 aa		5.18	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 38.8 ms