RNA–Protein interactions for RNA: YMR078C

CTF18, Transcript of Subunit of a complex with Ctf8p, yeastyeast

Gene CTF18, Length 2,226 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF18YMR078C NAT5Q08689 176 aa1.59□□□□□ -2.16
CTF18YMR078C LST8P41318 303 aa1.58□□□□□ -2.16
CTF18YMR078C CSN9Q03981 162 aa1.58□□□□□ -2.16
CTF18YMR078C RPS22AP0C0W1 130 aaKnown RBP1.58□□□□□ -2.16
CTF18YMR078C YCR050CP25630 102 aa1.58□□□□□ -2.16
CTF18YMR078C SFT2P38166 215 aa1.58□□□□□ -2.16
CTF18YMR078C SPG1P50088 95 aa1.58□□□□□ -2.16
CTF18YMR078C RPS22BQ3E7Y3 130 aaKnown RBP1.58□□□□□ -2.16
CTF18YMR078C NMT1P14743 455 aa1.57□□□□□ -2.16
CTF18YMR078C YAL064WP39711 94 aa1.57□□□□□ -2.16
CTF18YMR078C EMC4P53073 190 aa1.57□□□□□ -2.16
CTF18YMR078C YGL149WP53116 101 aa1.57□□□□□ -2.16
CTF18YMR078C YHR213W-BQ8TGK1 99 aa1.56□□□□□ -2.16
CTF18YMR078C KOG1P38873 1557 aa1.56□□□□□ -2.16
CTF18YMR078C GSC2P40989 1895 aa1.55□□□□□ -2.16
CTF18YMR078C YHR213WP0CI67 198 aa1.55□□□□□ -2.16
CTF18YMR078C UTP11P34247 250 aaPredicted RBP1.55□□□□□ -2.16
CTF18YMR078C BRP1P53194 125 aa1.55□□□□□ -2.16
CTF18YMR078C YOR072WQ08486 104 aa1.55□□□□□ -2.16
CTF18YMR078C QCR10P37299 77 aa1.55□□□□□ -2.16
CTF18YMR078C AIM4P38305 123 aaPredicted RBP1.55□□□□□ -2.16
CTF18YMR078C CYC2P38909 366 aa1.55□□□□□ -2.16
CTF18YMR078C SRL3P36167 246 aa1.54□□□□□ -2.16
CTF18YMR078C COA4Q05809 96 aa1.54□□□□□ -2.16
CTF18YMR078C DNA2P38859 1522 aa1.53□□□□□ -2.16
CTF18YMR078C ELC1Q03071 99 aa1.53□□□□□ -2.16
CTF18YMR078C TVP18Q04767 167 aa1.52□□□□□ -2.17
CTF18YMR078C RTC6O14464 93 aa1.52□□□□□ -2.17
CTF18YMR078C IRC21Q04772 201 aa1.52□□□□□ -2.17
CTF18YMR078C MRPL44P19956 98 aa1.51□□□□□ -2.17
CTF18YMR078C ANB1P19211 157 aa1.5□□□□□ -2.17
CTF18YMR078C HYM1P32464 399 aa1.5□□□□□ -2.17
CTF18YMR078C KTI11Q3E840 82 aa1.48□□□□□ -2.17
CTF18YMR078C SWR1Q05471 1514 aa1.48□□□□□ -2.17
CTF18YMR078C YJL009WP47078 108 aa1.48□□□□□ -2.17
CTF18YMR078C GIM4P40005 111 aaKnown RBP1.47□□□□□ -2.17
CTF18YMR078C GTT2Q12390 233 aa1.47□□□□□ -2.17
CTF18YMR078C ACP1P32463 125 aa1.46□□□□□ -2.18
CTF18YMR078C YMR141CP40211 102 aa1.46□□□□□ -2.18
CTF18YMR078C TIM8P57744 87 aa1.46□□□□□ -2.18
CTF18YMR078C YLR296WQ05898 108 aa1.46□□□□□ -2.18
CTF18YMR078C YNL277W-AQ3E7Z0 62 aa1.46□□□□□ -2.18
CTF18YMR078C MRPL11P36521 249 aaPredicted RBP1.46□□□□□ -2.18
CTF18YMR078C SDH7Q04401 133 aa1.46□□□□□ -2.18
CTF18YMR078C AIM18P38884 321 aa1.45□□□□□ -2.18
CTF18YMR078C PHS1P40857 217 aa1.45□□□□□ -2.18
CTF18YMR078C MVB12P42939 101 aa1.45□□□□□ -2.18
CTF18YMR078C YLR361C-AQ3E795 98 aa1.45□□□□□ -2.18
CTF18YMR078C PAU21P0CE86 164 aa1.44□□□□□ -2.18
CTF18YMR078C PAU22P0CE87 164 aa1.44□□□□□ -2.18
CTF18YMR078C HSP10P38910 106 aa1.44□□□□□ -2.18
CTF18YMR078C YGR017WP53210 297 aa1.44□□□□□ -2.18
CTF18YMR078C LAA1P39526 2014 aa1.44□□□□□ -2.18
CTF18YMR078C YGL204CP53089 101 aa1.43□□□□□ -2.18
CTF18YMR078C SUA7P29055 345 aaPredicted RBP1.43□□□□□ -2.18
CTF18YMR078C YBR013CP38215 129 aa1.43□□□□□ -2.18
CTF18YMR078C PRS3P38689 320 aaKnown RBP1.43□□□□□ -2.18
CTF18YMR078C RPS20P38701 121 aaKnown RBP1.43□□□□□ -2.18
CTF18YMR078C MIC27P50945 234 aa1.42□□□□□ -2.18
CTF18YMR078C FIT3Q08907 204 aa1.42□□□□□ -2.18
CTF18YMR078C YSF3P0C074 85 aaPredicted RBP1.42□□□□□ -2.18
CTF18YMR078C SFT1P43682 97 aa1.42□□□□□ -2.18
CTF18YMR078C HUG1Q6Q5K6 68 aa1.42□□□□□ -2.18
CTF18YMR078C SNT2P53127 1403 aa1.42□□□□□ -2.18
CTF18YMR078C HAP3P13434 144 aa1.41□□□□□ -2.18
CTF18YMR078C YGR042WP53227 271 aa1.41□□□□□ -2.18
CTF18YMR078C YDR278CQ05612 105 aa1.4□□□□□ -2.19
CTF18YMR078C PFY1P07274 126 aa1.39□□□□□ -2.19
CTF18YMR078C ATP14Q12349 124 aa1.39□□□□□ -2.19
CTF18YMR078C PRP8P33334 2413 aaKnown RBP1.37□□□□□ -2.19
CTF18YMR078C DNF1P32660 1571 aa1.37□□□□□ -2.19
CTF18YMR078C RPL43AP0CX25 92 aaKnown RBP1.37□□□□□ -2.19
CTF18YMR078C RPL43BP0CX26 92 aa1.37□□□□□ -2.19
CTF18YMR078C COA6Q3E846 104 aa1.37□□□□□ -2.19
CTF18YMR078C CNL1Q06333 122 aa1.36□□□□□ -2.19
CTF18YMR078C IRC20Q06554 1556 aa1.36□□□□□ -2.19
CTF18YMR078C LDB18Q07887 179 aa1.36□□□□□ -2.19
CTF18YMR078C YOR376W-AQ3E805 51 aa1.36□□□□□ -2.19
CTF18YMR078C REV3P14284 1504 aa1.35□□□□□ -2.19
CTF18YMR078C MDS3P53094 1487 aa1.35□□□□□ -2.19
CTF18YMR078C GSP1P32835 219 aaKnown RBP1.35□□□□□ -2.19
CTF18YMR078C GAT4P40569 121 aa1.35□□□□□ -2.19
CTF18YMR078C SPC2Q04969 178 aa1.35□□□□□ -2.19
CTF18YMR078C Q0144Q9ZZW2 109 aa1.35□□□□□ -2.19
CTF18YMR078C MYO2P19524 1574 aaKnown RBP1.35□□□□□ -2.19
CTF18YMR078C FCF2Q12035 217 aaPredicted RBP1.34□□□□□ -2.19
CTF18YMR078C ERV14P53173 138 aa1.33□□□□□ -2.2
CTF18YMR078C TY4B-JP47024 1803 aa1.33□□□□□ -2.2
CTF18YMR078C DYN2Q02647 92 aa1.32□□□□□ -2.2
CTF18YMR078C YLR307C-AQ3E825 87 aa1.32□□□□□ -2.2
CTF18YMR078C LTE1P07866 1435 aa1.32□□□□□ -2.2
CTF18YMR078C YOR034C-AQ3E735 80 aa1.32□□□□□ -2.2
CTF18YMR078C RPL36BO14455 100 aaKnown RBP1.31□□□□□ -2.2
CTF18YMR078C RPL36AP05745 100 aaPredicted RBP1.31□□□□□ -2.2
CTF18YMR078C SEC59P20048 519 aa1.31□□□□□ -2.2
CTF18YMR078C YIL163CP40448 117 aa1.31□□□□□ -2.2
CTF18YMR078C NUM1Q00402 2748 aa1.31□□□□□ -2.2
CTF18YMR078C TY1B-DR4Q07793 1604 aa1.3□□□□□ -2.2
CTF18YMR078C YOR093CQ12275 1648 aa1.3□□□□□ -2.2
CTF18YMR078C THO2P53552 1597 aaKnown RBP1.3□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 29.9 ms