RNA–Protein interactions for RNA: YML041C

VPS71, Transcript of Nucleosome-binding component of the SWR1 complex, yeastyeast

Gene VPS71, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS71YML041C HYP2P23301 157 aaKnown RBP2.49□□□□□ -2.01
VPS71YML041C HSP150P32478 413 aa2.49□□□□□ -2.01
VPS71YML041C YBR242WP38331 238 aa2.49□□□□□ -2.01
VPS71YML041C IPT1P38954 527 aa2.49□□□□□ -2.01
VPS71YML041C YEL008WP40001 126 aa2.49□□□□□ -2.01
VPS71YML041C YFL065CP43539 102 aa2.49□□□□□ -2.01
VPS71YML041C BAT2P47176 376 aaKnown RBP2.49□□□□□ -2.01
VPS71YML041C AIM36Q03798 255 aa2.49□□□□□ -2.01
VPS71YML041C CMC4Q3E7A9 73 aa2.49□□□□□ -2.01
VPS71YML041C COA3Q3E7B2 85 aa2.49□□□□□ -2.01
VPS71YML041C MDS3P53094 1487 aa2.49□□□□□ -2.01
VPS71YML041C UBR2Q07963 1872 aa2.48□□□□□ -2.01
VPS71YML041C KIN28P06242 306 aa2.48□□□□□ -2.01
VPS71YML041C HSP10P38910 106 aa2.48□□□□□ -2.01
VPS71YML041C LDB18Q07887 179 aa2.48□□□□□ -2.01
VPS71YML041C MHF1Q3E835 90 aa2.48□□□□□ -2.01
VPS71YML041C ANB1P19211 157 aa2.47□□□□□ -2.01
VPS71YML041C GAT4P40569 121 aa2.47□□□□□ -2.01
VPS71YML041C YGL149WP53116 101 aa2.47□□□□□ -2.01
VPS71YML041C RUB1Q03919 77 aa2.47□□□□□ -2.01
VPS71YML041C HSL1P34244 1518 aa2.46□□□□□ -2.02
VPS71YML041C HAP3P13434 144 aa2.45□□□□□ -2.02
VPS71YML041C FUN14P18411 198 aa2.45□□□□□ -2.02
VPS71YML041C YCL042WP25572 119 aa2.45□□□□□ -2.02
VPS71YML041C MRPL15P36523 253 aa2.45□□□□□ -2.02
VPS71YML041C DCV1P43595 202 aa2.45□□□□□ -2.02
VPS71YML041C ERV14P53173 138 aa2.45□□□□□ -2.02
VPS71YML041C YPL067CQ02754 198 aa2.45□□□□□ -2.02
VPS71YML041C VAM10Q08474 114 aa2.45□□□□□ -2.02
VPS71YML041C SEC59P20048 519 aa2.44□□□□□ -2.02
VPS71YML041C PAU21P0CE86 164 aa2.43□□□□□ -2.02
VPS71YML041C PAU22P0CE87 164 aa2.43□□□□□ -2.02
VPS71YML041C NMT1P14743 455 aa2.43□□□□□ -2.02
VPS71YML041C BRP1P53194 125 aa2.43□□□□□ -2.02
VPS71YML041C FIT1Q04433 528 aa2.43□□□□□ -2.02
VPS71YML041C SPP41P38904 1435 aa2.42□□□□□ -2.02
VPS71YML041C ADK1P07170 222 aaKnown RBP2.42□□□□□ -2.02
VPS71YML041C RTR2Q12378 196 aa2.42□□□□□ -2.02
VPS71YML041C BEM2P39960 2167 aaKnown RBP2.42□□□□□ -2.02
VPS71YML041C SRL3P36167 246 aa2.41□□□□□ -2.02
VPS71YML041C MRPL11P36521 249 aaPredicted RBP2.41□□□□□ -2.02
VPS71YML041C YBR027CP38220 110 aa2.41□□□□□ -2.02
VPS71YML041C RGI1P40043 161 aaPredicted RBP2.41□□□□□ -2.02
VPS71YML041C YLR042CQ07990 161 aa2.41□□□□□ -2.02
VPS71YML041C YCR099CP25657 155 aa2.4□□□□□ -2.03
VPS71YML041C YKL044WP36092 106 aa2.4□□□□□ -2.03
VPS71YML041C ATG8P38182 117 aaRIP-Chip data2.4□□□□□ -2.03not detected
VPS71YML041C YFL051CP43552 160 aa2.4□□□□□ -2.03
VPS71YML041C YPR203WQ08994 102 aa2.4□□□□□ -2.03
VPS71YML041C YOR097CQ12274 175 aaPredicted RBP2.4□□□□□ -2.03
VPS71YML041C GTT2Q12390 233 aa2.4□□□□□ -2.03
VPS71YML041C SNF11P38956 169 aa2.39□□□□□ -2.03
VPS71YML041C TDA2P40045 126 aa2.39□□□□□ -2.03
VPS71YML041C YER137CP40083 148 aaKnown RBP2.39□□□□□ -2.03
VPS71YML041C SED1Q01589 338 aa2.39□□□□□ -2.03
VPS71YML041C GPI19Q04082 140 aa2.39□□□□□ -2.03
VPS71YML041C RPL33AP05744 107 aaKnown RBP2.38□□□□□ -2.03
VPS71YML041C RPL36BO14455 100 aaKnown RBP2.37□□□□□ -2.03
VPS71YML041C RPL36AP05745 100 aaPredicted RBP2.37□□□□□ -2.03
VPS71YML041C YAR029WP39549 74 aa2.37□□□□□ -2.03
VPS71YML041C PAM16P42949 149 aa2.37□□□□□ -2.03
VPS71YML041C YOR376W-AQ3E805 51 aa2.37□□□□□ -2.03
VPS71YML041C PFY1P07274 126 aa2.36□□□□□ -2.03
VPS71YML041C YHR213WP0CI67 198 aa2.36□□□□□ -2.03
VPS71YML041C LHP1P33399 275 aaKnown RBP2.36□□□□□ -2.03
VPS71YML041C UTP11P34247 250 aaPredicted RBP2.36□□□□□ -2.03
VPS71YML041C YLR296WQ05898 108 aa2.36□□□□□ -2.03
VPS71YML041C YGL014C-AP0C5N1 53 aa2.35□□□□□ -2.03
VPS71YML041C RPS12P48589 143 aaKnown RBP2.35□□□□□ -2.03
VPS71YML041C TRM732Q03496 1420 aa2.34□□□□□ -2.03
VPS71YML041C YHR212W-AP0CX91 67 aa2.34□□□□□ -2.03
VPS71YML041C YHL037CP38733 133 aa2.34□□□□□ -2.03
VPS71YML041C YFR035CP43608 114 aa2.34□□□□□ -2.03
VPS71YML041C SEN15Q04675 128 aa2.34□□□□□ -2.03
VPS71YML041C IRC21Q04772 201 aa2.34□□□□□ -2.03
VPS71YML041C FYV7Q12247 151 aa2.34□□□□□ -2.03
VPS71YML041C YER039C-AP0CD97 72 aa2.33□□□□□ -2.04
VPS71YML041C RPL40AP0CH08 128 aaKnown RBP2.33□□□□□ -2.04
VPS71YML041C RPL40BP0CH09 128 aaKnown RBP2.33□□□□□ -2.04
VPS71YML041C LST8P41318 303 aa2.33□□□□□ -2.04
VPS71YML041C YMR122CQ03879 124 aa2.33□□□□□ -2.04
VPS71YML041C RTC6O14464 93 aa2.32□□□□□ -2.04
VPS71YML041C AQY2P0CD90 149 aa2.32□□□□□ -2.04
VPS71YML041C GSP1P32835 219 aaKnown RBP2.32□□□□□ -2.04
VPS71YML041C HPA2Q06592 156 aa2.32□□□□□ -2.04
VPS71YML041C MED11Q99278 115 aa2.32□□□□□ -2.04
VPS71YML041C VAR1P02381 398 aa2.31□□□□□ -2.04
VPS71YML041C AIM18P38884 321 aa2.31□□□□□ -2.04
VPS71YML041C SNT2P53127 1403 aa2.31□□□□□ -2.04
VPS71YML041C GSC2P40989 1895 aa2.31□□□□□ -2.04
VPS71YML041C GNA1P43577 159 aaPredicted RBP2.3□□□□□ -2.04
VPS71YML041C YPL261CQ08976 102 aa2.3□□□□□ -2.04
VPS71YML041C TSC11P40061 1430 aa2.29□□□□□ -2.04
VPS71YML041C YGR164WP53291 111 aa2.29□□□□□ -2.04
VPS71YML041C YMR007WQ03675 126 aa2.28□□□□□ -2.04
VPS71YML041C DAD1Q12248 94 aa2.28□□□□□ -2.04
VPS71YML041C YLR365WQ7LIF2 110 aa2.28□□□□□ -2.04
VPS71YML041C EMP24P32803 203 aaKnown RBP2.27□□□□□ -2.05
VPS71YML041C YAR064WP39563 99 aa2.27□□□□□ -2.05
VPS71YML041C GTT1P40582 234 aa2.27□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms