RNA–Protein interactions for RNA: YLR022C

SDO1, Transcript of Guanine nucleotide exchange factor (GEF) for Ria1p, yeastyeast

Gene SDO1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDO1YLR022C YGL204CP53089 101 aa2.1□□□□□ -2.07
SDO1YLR022C YNL033WP53964 284 aa2.1□□□□□ -2.07
SDO1YLR022C YNL019CP53975 284 aa2.1□□□□□ -2.07
SDO1YLR022C PKR1Q03880 122 aaKnown RBP2.1□□□□□ -2.07
SDO1YLR022C HNT1Q04344 158 aaKnown RBP2.1□□□□□ -2.07
SDO1YLR022C YLR179CQ06252 201 aaKnown RBP2.1□□□□□ -2.07
SDO1YLR022C VAM10Q08474 114 aa2.1□□□□□ -2.07
SDO1YLR022C IES3Q12345 250 aa2.1□□□□□ -2.07
SDO1YLR022C YOR192C-CQ3E736 78 aa2.1□□□□□ -2.07
SDO1YLR022C YBL112CQ3E7Y4 105 aa2.1□□□□□ -2.07
SDO1YLR022C CKS1P20486 150 aaKnown RBP2.09□□□□□ -2.07
SDO1YLR022C IDP1P21954 428 aaKnown RBP2.09□□□□□ -2.07
SDO1YLR022C MSA2P36157 363 aa2.09□□□□□ -2.07
SDO1YLR022C YBL081WP38180 368 aaKnown RBP2.09□□□□□ -2.07
SDO1YLR022C TRS20P38334 175 aa2.09□□□□□ -2.07
SDO1YLR022C YBR285WP38354 144 aa2.09□□□□□ -2.07
SDO1YLR022C IRC22P40006 225 aa2.09□□□□□ -2.07
SDO1YLR022C BUD25P85052 153 aa2.09□□□□□ -2.07
SDO1YLR022C PRR2Q12310 699 aa2.09□□□□□ -2.07
SDO1YLR022C DGK1Q12382 290 aa2.09□□□□□ -2.07
SDO1YLR022C RPL9AP05738 191 aaKnown RBP2.08□□□□□ -2.08
SDO1YLR022C YPR170W-BP0C5R9 85 aa2.08□□□□□ -2.08
SDO1YLR022C URA5P13298 226 aaKnown RBP2.08□□□□□ -2.08
SDO1YLR022C COX10P21592 462 aa2.08□□□□□ -2.08
SDO1YLR022C BET1P22804 142 aa2.08□□□□□ -2.08
SDO1YLR022C PRE7P23724 241 aaKnown RBP2.08□□□□□ -2.08
SDO1YLR022C PEX4P29340 183 aa2.08□□□□□ -2.08
SDO1YLR022C UTP30P36144 274 aaKnown RBP2.08□□□□□ -2.08
SDO1YLR022C BDH1P39714 382 aa2.08□□□□□ -2.08
SDO1YLR022C OST2P46964 130 aa2.08□□□□□ -2.08
SDO1YLR022C HST4P53688 370 aa2.08□□□□□ -2.08
SDO1YLR022C RAV2Q03956 351 aa2.08□□□□□ -2.08
SDO1YLR022C DGA1Q08650 418 aa2.08□□□□□ -2.08
SDO1YLR022C YPL162CQ12042 273 aa2.08□□□□□ -2.08
SDO1YLR022C YOL085CQ99345 113 aa2.08□□□□□ -2.08
SDO1YLR022C YHR139C-AO13536 103 aa2.07□□□□□ -2.08
SDO1YLR022C PDX3P38075 228 aaKnown RBP2.07□□□□□ -2.08
SDO1YLR022C GNA1P43577 159 aaPredicted RBP2.07□□□□□ -2.08
SDO1YLR022C ARP3P47117 449 aaKnown RBP2.07□□□□□ -2.08
SDO1YLR022C ARO8P53090 500 aaKnown RBP2.07□□□□□ -2.08
SDO1YLR022C ALG9P53868 555 aaKnown RBP2.07□□□□□ -2.08
SDO1YLR022C SMD1Q02260 146 aaPredicted RBP2.07□□□□□ -2.08
SDO1YLR022C RPB3P16370 318 aaKnown RBP2.06□□□□□ -2.08
SDO1YLR022C BUD23P25627 275 aaPredicted RBP2.06□□□□□ -2.08
SDO1YLR022C FMT1P32785 401 aa2.06□□□□□ -2.08
SDO1YLR022C YBL010CP32788 280 aa2.06□□□□□ -2.08
SDO1YLR022C YPT31P38555 223 aaKnown RBP2.06□□□□□ -2.08
SDO1YLR022C ARC15P40518 154 aaRIP-Chip data2.06□□□□□ -2.08not detected
SDO1YLR022C YGL088WP53151 121 aa2.06□□□□□ -2.08
SDO1YLR022C YGR026WP53217 278 aa2.06□□□□□ -2.08
SDO1YLR022C YOL118CQ08259 102 aa2.06□□□□□ -2.08
SDO1YLR022C YFR032C-BQ8TGU2 87 aa2.06□□□□□ -2.08
SDO1YLR022C YLR156WP0CE96 114 aa2.05□□□□□ -2.08
SDO1YLR022C YLR159WP0CE97 114 aa2.05□□□□□ -2.08
SDO1YLR022C YLR161WP0CE98 114 aa2.05□□□□□ -2.08
SDO1YLR022C SPO13P23624 291 aa2.05□□□□□ -2.08
SDO1YLR022C YCR023CP25351 611 aa2.05□□□□□ -2.08
SDO1YLR022C CIN5P40917 295 aa2.05□□□□□ -2.08
SDO1YLR022C YFR045WP43617 309 aa2.05□□□□□ -2.08
SDO1YLR022C SKI6P46948 246 aaPredicted RBP2.05□□□□□ -2.08
SDO1YLR022C DSK2P48510 373 aa2.05□□□□□ -2.08
SDO1YLR022C RBL2P48606 106 aaKnown RBP2.05□□□□□ -2.08
SDO1YLR022C YGR017WP53210 297 aa2.05□□□□□ -2.08
SDO1YLR022C TSC3Q3E790 80 aa2.05□□□□□ -2.08
SDO1YLR022C YOR011W-AQ3E807 68 aa2.05□□□□□ -2.08
SDO1YLR022C UBC8P28263 218 aa2.04□□□□□ -2.08
SDO1YLR022C AGA2P32781 87 aa2.04□□□□□ -2.08
SDO1YLR022C SNC2P33328 115 aa2.04□□□□□ -2.08
SDO1YLR022C UMP1P38293 148 aa2.04□□□□□ -2.08
SDO1YLR022C YHR125WP38831 101 aa2.04□□□□□ -2.08
SDO1YLR022C POR2P40478 281 aa2.04□□□□□ -2.08
SDO1YLR022C LST8P41318 303 aa2.04□□□□□ -2.08
SDO1YLR022C YJL027CP47063 138 aaPredicted RBP2.04□□□□□ -2.08
SDO1YLR022C YPR063CQ12160 140 aa2.04□□□□□ -2.08
SDO1YLR022C PST2Q12335 198 aaKnown RBP2.04□□□□□ -2.08
SDO1YLR022C YLR412C-AQ3E742 68 aa2.04□□□□□ -2.08
SDO1YLR022C Q0255P03881 472 aa2.03□□□□□ -2.08
SDO1YLR022C YGL041W-AP0C5N3 154 aa2.03□□□□□ -2.08
SDO1YLR022C IPI1P38803 334 aaPredicted RBP2.03□□□□□ -2.08
SDO1YLR022C YEA4P40004 342 aa2.03□□□□□ -2.08
SDO1YLR022C YER134CP40081 178 aa2.03□□□□□ -2.08
SDO1YLR022C YIR035CP40579 254 aa2.03□□□□□ -2.08
SDO1YLR022C GPI14P47088 403 aaKnown RBP2.03□□□□□ -2.08
SDO1YLR022C YJR111CP47148 283 aaKnown RBP2.03□□□□□ -2.08
SDO1YLR022C FCF1Q05498 189 aaPredicted RBP2.03□□□□□ -2.08
SDO1YLR022C YDR010CQ12426 110 aa2.03□□□□□ -2.08
SDO1YLR022C HIS3P06633 220 aa2.02□□□□□ -2.09
SDO1YLR022C YDR034C-AP0C289 58 aa2.02□□□□□ -2.09
SDO1YLR022C UBI4P0CG63 381 aaKnown RBP2.02□□□□□ -2.09
SDO1YLR022C RPS11AP0CX47 156 aaKnown RBP2.02□□□□□ -2.09
SDO1YLR022C RPS11BP0CX48 156 aaKnown RBP2.02□□□□□ -2.09
SDO1YLR022C NHP6AP11632 93 aaKnown RBP2.02□□□□□ -2.09
SDO1YLR022C SEN2P16658 377 aa2.02□□□□□ -2.09
SDO1YLR022C SLM6P38343 150 aa2.02□□□□□ -2.09
SDO1YLR022C SNF11P38956 169 aa2.02□□□□□ -2.09
SDO1YLR022C SER2P42941 309 aa2.02□□□□□ -2.09
SDO1YLR022C YJR015WP47090 510 aa2.02□□□□□ -2.09
SDO1YLR022C TOM7P53507 60 aa2.02□□□□□ -2.09
SDO1YLR022C ATP14Q12349 124 aa2.02□□□□□ -2.09
SDO1YLR022C YCR075W-AQ3E830 75 aa2.02□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 25.6 ms