RNA–Protein interactions for RNA: YKR065C

PAM17, Transcript of Constituent of the TIM23 complex, yeast

Gene PAM17, Length 594 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAM17	YKR065C	YGL185C	P53100	379 aa		5.54	□□□□□ -1.52
PAM17	YKR065C	UTP23	Q12339	254 aa	Known RBP	5.54	□□□□□ -1.52
PAM17	YKR065C	YNL146C-A	Q3E7Z1	64 aa		5.54	□□□□□ -1.52
PAM17	YKR065C	ADH3	P07246	375 aa	Known RBP	5.53	□□□□□ -1.52
PAM17	YKR065C	RPB3	P16370	318 aa	Known RBP	5.53	□□□□□ -1.52
PAM17	YKR065C	AME1	P38313	324 aa		5.53	□□□□□ -1.52
PAM17	YKR065C	MBB1	P39534	108 aa		5.53	□□□□□ -1.52
PAM17	YKR065C	CAX4	P53223	239 aa		5.53	□□□□□ -1.52
PAM17	YKR065C	YIP3	P53633	176 aa		5.53	□□□□□ -1.52
PAM17	YKR065C	YMR253C	Q04835	414 aa		5.53	□□□□□ -1.52
PAM17	YKR065C	RPL31B	P0C2H9	113 aa	Known RBP	5.52	□□□□□ -1.53
PAM17	YKR065C	RPS0A	P32905	252 aa	Known RBP	5.52	□□□□□ -1.53
PAM17	YKR065C	GLE2	P40066	365 aa		5.52	□□□□□ -1.53
PAM17	YKR065C	COX16	P47081	118 aa		5.52	□□□□□ -1.53
PAM17	YKR065C	TIM21	P53220	239 aa		5.52	□□□□□ -1.53
PAM17	YKR065C	ATP19	P81451	68 aa		5.52	□□□□□ -1.53
PAM17	YKR065C	CPT1	P17898	393 aa		5.51	□□□□□ -1.53
PAM17	YKR065C	MRPS9	P38120	278 aa		5.51	□□□□□ -1.53
PAM17	YKR065C	DAD3	P69850	94 aa		5.51	□□□□□ -1.53
PAM17	YKR065C	YDR274C	P87283	123 aa		5.51	□□□□□ -1.53
PAM17	YKR065C	ZEO1	Q08245	113 aa		5.51	□□□□□ -1.53
PAM17	YKR065C	YOL160W	Q08321	113 aa		5.51	□□□□□ -1.53
PAM17	YKR065C	YOR105W	Q08504	108 aa		5.51	□□□□□ -1.53
PAM17	YKR065C	FMP49	A0A023PZB3	126 aa		5.5	□□□□□ -1.53
PAM17	YKR065C	RPL32	P38061	130 aa	Known RBP	5.5	□□□□□ -1.53
PAM17	YKR065C	MST28	P39552	234 aa		5.5	□□□□□ -1.53
PAM17	YKR065C	PGD1	P40356	397 aa		5.5	□□□□□ -1.53
PAM17	YKR065C	MST27	P53176	234 aa		5.5	□□□□□ -1.53
PAM17	YKR065C	APS2	Q00381	147 aa		5.5	□□□□□ -1.53
PAM17	YKR065C	DAD1	Q12248	94 aa		5.5	□□□□□ -1.53
PAM17	YKR065C	SMT3	Q12306	101 aa	Known RBP	5.5	□□□□□ -1.53
PAM17	YKR065C	DCN1	Q12395	269 aa		5.5	□□□□□ -1.53
PAM17	YKR065C	CNB1	P25296	175 aa		5.49	□□□□□ -1.53
PAM17	YKR065C	POF1	P25576	258 aa		5.49	□□□□□ -1.53
PAM17	YKR065C	UPS3	Q04006	179 aa		5.49	□□□□□ -1.53
PAM17	YKR065C	GRH1	Q04410	372 aa	Known RBP	5.49	□□□□□ -1.53
PAM17	YKR065C	CCW12	Q12127	133 aa		5.49	□□□□□ -1.53
PAM17	YKR065C	YPR013C	Q12145	317 aa		5.49	□□□□□ -1.53
PAM17	YKR065C	YOR011W-A	Q3E807	68 aa		5.49	□□□□□ -1.53
PAM17	YKR065C	RPS8A	P0CX39	200 aa	Known RBP	5.48	□□□□□ -1.53
PAM17	YKR065C	RPS8B	P0CX40	200 aa	Known RBP	5.48	□□□□□ -1.53
PAM17	YKR065C	TIR1	P10863	254 aa		5.48	□□□□□ -1.53
PAM17	YKR065C	SRP21	P32342	167 aa		5.48	□□□□□ -1.53
PAM17	YKR065C	PRE5	P40302	234 aa	Known RBP	5.48	□□□□□ -1.53
PAM17	YKR065C	SIM1	P40472	476 aa		5.48	□□□□□ -1.53
PAM17	YKR065C	HAM1	P47119	197 aa	Known RBP	5.48	□□□□□ -1.53
PAM17	YKR065C	MOG1	P47123	218 aa		5.48	□□□□□ -1.53
PAM17	YKR065C	BNS1	P50084	137 aa		5.48	□□□□□ -1.53
PAM17	YKR065C	MGA1	P53050	456 aa		5.48	□□□□□ -1.53
PAM17	YKR065C	VPS71	Q03433	280 aa		5.48	□□□□□ -1.53
PAM17	YKR065C	RAV2	Q03956	351 aa		5.48	□□□□□ -1.53
PAM17	YKR065C	YLR342W-A	Q3E810	57 aa		5.48	□□□□□ -1.53
PAM17	YKR065C	RPL12A	P0CX53	165 aa	Known RBP	5.47	□□□□□ -1.53
PAM17	YKR065C	RPL12B	P0CX54	165 aa		5.47	□□□□□ -1.53
PAM17	YKR065C	NHP6A	P11632	93 aa	Known RBP	5.47	□□□□□ -1.53
PAM17	YKR065C	YCR007C	P25354	239 aa		5.47	□□□□□ -1.53
PAM17	YKR065C	PAU15	P40585	124 aa		5.47	□□□□□ -1.53
PAM17	YKR065C	LCB3	P47013	409 aa		5.47	□□□□□ -1.53
PAM17	YKR065C	MIC26	P50087	233 aa		5.47	□□□□□ -1.53
PAM17	YKR065C	TOM7	P53507	60 aa		5.47	□□□□□ -1.53
PAM17	YKR065C	DAD4	P69851	72 aa		5.47	□□□□□ -1.53
PAM17	YKR065C	YLR118C	Q12354	227 aa		5.47	□□□□□ -1.53
PAM17	YKR065C	SNU23	Q12368	194 aa	Predicted RBP	5.47	□□□□□ -1.53
PAM17	YKR065C	YOP1	Q12402	180 aa		5.47	□□□□□ -1.53
PAM17	YKR065C	TAR1	Q8TGM6	124 aa		5.47	□□□□□ -1.53
PAM17	YKR065C	DYN1	P36022	4092 aa		5.47	□□□□□ -1.53
PAM17	YKR065C	HMRA1	P0CY11	126 aa		5.46	□□□□□ -1.54
PAM17	YKR065C	SNO1	Q03144	224 aa		5.46	□□□□□ -1.54
PAM17	YKR065C	MRPS8	Q03799	155 aa		5.46	□□□□□ -1.54
PAM17	YKR065C	NAT3	Q06504	195 aa		5.46	□□□□□ -1.54
PAM17	YKR065C	PRM7	Q12459	698 aa		5.46	□□□□□ -1.54
PAM17	YKR065C	ATG8	P38182	117 aa	RIP-Chip data	5.45	□□□□□ -1.54	not detected
PAM17	YKR065C	IRC22	P40006	225 aa		5.45	□□□□□ -1.54
PAM17	YKR065C	YIL163C	P40448	117 aa		5.45	□□□□□ -1.54
PAM17	YKR065C	KEG1	P43614	200 aa		5.45	□□□□□ -1.54
PAM17	YKR065C	HHO1	P53551	258 aa		5.45	□□□□□ -1.54
PAM17	YKR065C	YMR244W	Q04018	355 aa		5.45	□□□□□ -1.54
PAM17	YKR065C	RPL2A	P0CX45	254 aa	Known RBP	5.44	□□□□□ -1.54
PAM17	YKR065C	RPL2B	P0CX46	254 aa	Known RBP	5.44	□□□□□ -1.54
PAM17	YKR065C	QRI5	P32344	111 aa		5.44	□□□□□ -1.54
PAM17	YKR065C	YHR022C	P38763	256 aa		5.44	□□□□□ -1.54
PAM17	YKR065C	YER135C	P40082	130 aa		5.44	□□□□□ -1.54
PAM17	YKR065C	YFR045W	P43617	309 aa		5.44	□□□□□ -1.54
PAM17	YKR065C	COX12	Q01519	83 aa		5.44	□□□□□ -1.54
PAM17	YKR065C	GIM5	Q04493	163 aa		5.44	□□□□□ -1.54
PAM17	YKR065C	MSC3	Q05812	728 aa		5.44	□□□□□ -1.54
PAM17	YKR065C	YCL021W-A	Q96VH3	125 aa		5.44	□□□□□ -1.54
PAM17	YKR065C	NTF2	P33331	125 aa	Known RBP	5.43	□□□□□ -1.54
PAM17	YKR065C	SPI1	P40092	148 aa		5.43	□□□□□ -1.54
PAM17	YKR065C	VMA21	P41806	77 aa		5.43	□□□□□ -1.54
PAM17	YKR065C	HIT1	P46973	164 aa		5.43	□□□□□ -1.54
PAM17	YKR065C	YBR126W-A	Q8TGU7	68 aa		5.43	□□□□□ -1.54
PAM17	YKR065C	YCL001W-B	Q96VH2	84 aa		5.43	□□□□□ -1.54
PAM17	YKR065C	RPS11A	P0CX47	156 aa	Known RBP	5.42	□□□□□ -1.54
PAM17	YKR065C	RPS11B	P0CX48	156 aa	Known RBP	5.42	□□□□□ -1.54
PAM17	YKR065C	SRP14	P38985	146 aa		5.42	□□□□□ -1.54
PAM17	YKR065C	YCH1	P42937	148 aa		5.42	□□□□□ -1.54
PAM17	YKR065C	CSM4	Q08955	156 aa		5.42	□□□□□ -1.54
PAM17	YKR065C	YCR075W-A	Q3E830	75 aa		5.42	□□□□□ -1.54
PAM17	YKR065C	VAR1	P02381	398 aa		5.41	□□□□□ -1.54

Retrieved 100 of 5,963 RNA–protein pairs in 43.2 ms