RNA–Protein interactions for RNA: YKL130C

SHE2, Transcript of RNA-binding protein that binds specific mRNAs and interacts with She3p, yeastyeast

Gene SHE2, Length 741 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE2YKL130C YHP1Q04116 353 aa1.32□□□□□ -2.2
SHE2YKL130C YLR162WQ06235 118 aa1.32□□□□□ -2.2
SHE2YKL130C ATG10Q07879 167 aa1.32□□□□□ -2.2
SHE2YKL130C ATG41Q12048 136 aa1.32□□□□□ -2.2
SHE2YKL130C DUR1,2P32528 1835 aaKnown RBP1.31□□□□□ -2.2
SHE2YKL130C RPC19P28000 142 aaKnown RBP1.31□□□□□ -2.2
SHE2YKL130C HPA3P39979 161 aa1.31□□□□□ -2.2
SHE2YKL130C GIM4P40005 111 aaKnown RBP1.31□□□□□ -2.2
SHE2YKL130C RPL13BP40212 199 aaKnown RBP1.31□□□□□ -2.2
SHE2YKL130C YGR201CP42936 225 aa1.31□□□□□ -2.2
SHE2YKL130C YGR042WP53227 271 aa1.31□□□□□ -2.2
SHE2YKL130C YNR064CP53750 290 aa1.31□□□□□ -2.2
SHE2YKL130C YDR366CP87287 132 aa1.31□□□□□ -2.2
SHE2YKL130C YML079WQ03629 201 aa1.31□□□□□ -2.2
SHE2YKL130C UPS1Q05776 175 aa1.31□□□□□ -2.2
SHE2YKL130C YPR114WQ06107 315 aa1.31□□□□□ -2.2
SHE2YKL130C CSI2Q08054 341 aa1.31□□□□□ -2.2
SHE2YKL130C FIT2Q08906 153 aa1.31□□□□□ -2.2
SHE2YKL130C UIP4Q08926 304 aa1.31□□□□□ -2.2
SHE2YKL130C RPL13AQ12690 199 aaPredicted RBP1.31□□□□□ -2.2
SHE2YKL130C CYR1P08678 2026 aaKnown RBP1.31□□□□□ -2.2
SHE2YKL130C ECM29P38737 1868 aa1.31□□□□□ -2.2
SHE2YKL130C SPS2P08459 502 aa1.3□□□□□ -2.2
SHE2YKL130C GPA2P10823 449 aa1.3□□□□□ -2.2
SHE2YKL130C YGL010WP25338 174 aa1.3□□□□□ -2.2
SHE2YKL130C YPT31P38555 223 aaKnown RBP1.3□□□□□ -2.2
SHE2YKL130C CCS1P40202 249 aaKnown RBP1.3□□□□□ -2.2
SHE2YKL130C FLX1P40464 311 aa1.3□□□□□ -2.2
SHE2YKL130C YGL204CP53089 101 aa1.3□□□□□ -2.2
SHE2YKL130C RCE1Q03530 315 aa1.3□□□□□ -2.2
SHE2YKL130C YMR320WQ04897 101 aa1.3□□□□□ -2.2
SHE2YKL130C LDB18Q07887 179 aa1.3□□□□□ -2.2
SHE2YKL130C PST2Q12335 198 aaKnown RBP1.3□□□□□ -2.2
SHE2YKL130C YMR030W-AQ3E760 96 aa1.3□□□□□ -2.2
SHE2YKL130C MYO1P08964 1928 aa1.29□□□□□ -2.2
SHE2YKL130C QCR8P08525 94 aa1.29□□□□□ -2.2
SHE2YKL130C YOL162WP0CF19 215 aa1.29□□□□□ -2.2
SHE2YKL130C STF2P16965 84 aa1.29□□□□□ -2.2
SHE2YKL130C PHO13P19881 312 aa1.29□□□□□ -2.2
SHE2YKL130C YBL010CP32788 280 aa1.29□□□□□ -2.2
SHE2YKL130C RPB7P34087 171 aa1.29□□□□□ -2.2
SHE2YKL130C MRPL24P36525 258 aaPredicted RBP1.29□□□□□ -2.2
SHE2YKL130C CYC2P38909 366 aa1.29□□□□□ -2.2
SHE2YKL130C MPM1P40364 252 aa1.29□□□□□ -2.2
SHE2YKL130C GPI2P46961 280 aa1.29□□□□□ -2.2
SHE2YKL130C YGR039WP53225 103 aa1.29□□□□□ -2.2
SHE2YKL130C HHO1P53551 258 aa1.29□□□□□ -2.2
SHE2YKL130C CWC27Q02770 301 aa1.29□□□□□ -2.2
SHE2YKL130C COF1Q03048 143 aaKnown RBP1.29□□□□□ -2.2
SHE2YKL130C CSN9Q03981 162 aa1.29□□□□□ -2.2
SHE2YKL130C RRT7Q07829 113 aa1.29□□□□□ -2.2
SHE2YKL130C GTT2Q12390 233 aa1.29□□□□□ -2.2
SHE2YKL130C VPS13Q07878 3144 aa1.29□□□□□ -2.2
SHE2YKL130C UBR2Q07963 1872 aa1.29□□□□□ -2.2
SHE2YKL130C TEL1P38110 2787 aa1.28□□□□□ -2.2
SHE2YKL130C INO4P13902 151 aa1.28□□□□□ -2.2
SHE2YKL130C HSP12P22943 109 aaKnown RBP1.28□□□□□ -2.2
SHE2YKL130C MRPL15P36523 253 aa1.28□□□□□ -2.2
SHE2YKL130C YEL067CP39978 195 aa1.28□□□□□ -2.2
SHE2YKL130C YGR269WP40326 108 aa1.28□□□□□ -2.2
SHE2YKL130C HYR1P40581 163 aaKnown RBP1.28□□□□□ -2.2
SHE2YKL130C YJL218WP40892 196 aaKnown RBP1.28□□□□□ -2.2
SHE2YKL130C PHB1P40961 287 aa1.28□□□□□ -2.2
SHE2YKL130C YAE1P47118 141 aaPredicted RBP1.28□□□□□ -2.2
SHE2YKL130C ATP19P81451 68 aa1.28□□□□□ -2.2
SHE2YKL130C MET31Q03081 177 aa1.28□□□□□ -2.2
SHE2YKL130C YDL157CQ12082 118 aa1.28□□□□□ -2.2
SHE2YKL130C YNL146C-AQ3E7Z1 64 aa1.28□□□□□ -2.2
SHE2YKL130C DDP1Q99321 188 aaKnown RBP1.28□□□□□ -2.2
SHE2YKL130C SEN1Q00416 2231 aaKnown RBP1.28□□□□□ -2.2
SHE2YKL130C MRS4P23500 304 aa1.27□□□□□ -2.21
SHE2YKL130C YCL042WP25572 119 aa1.27□□□□□ -2.21
SHE2YKL130C SRP21P32342 167 aa1.27□□□□□ -2.21
SHE2YKL130C SPT14P32363 452 aa1.27□□□□□ -2.21
SHE2YKL130C SHB17P36136 271 aaKnown RBP1.27□□□□□ -2.21
SHE2YKL130C AIM18P38884 321 aa1.27□□□□□ -2.21
SHE2YKL130C CIN5P40917 295 aa1.27□□□□□ -2.21
SHE2YKL130C BAT2P47176 376 aaKnown RBP1.27□□□□□ -2.21
SHE2YKL130C EMC4P53073 190 aa1.27□□□□□ -2.21
SHE2YKL130C GEP7P53171 287 aa1.27□□□□□ -2.21
SHE2YKL130C ELP6Q04868 273 aa1.27□□□□□ -2.21
SHE2YKL130C YIL046W-AQ3E7Z4 54 aa1.27□□□□□ -2.21
SHE2YKL130C FMP27Q06179 2628 aa1.26□□□□□ -2.21
SHE2YKL130C BEM2P39960 2167 aaKnown RBP1.26□□□□□ -2.21
SHE2YKL130C RPS25BP0C0T4 108 aaKnown RBP1.26□□□□□ -2.21
SHE2YKL130C RPL43AP0CX25 92 aaKnown RBP1.26□□□□□ -2.21
SHE2YKL130C RPL43BP0CX26 92 aa1.26□□□□□ -2.21
SHE2YKL130C DDR48P18899 430 aaKnown RBP1.26□□□□□ -2.21
SHE2YKL130C YHL042WP38729 150 aa1.26□□□□□ -2.21
SHE2YKL130C UBC7Q02159 165 aa1.26□□□□□ -2.21
SHE2YKL130C EST3Q03096 181 aa1.26□□□□□ -2.21
SHE2YKL130C NHP10Q03435 203 aa1.26□□□□□ -2.21
SHE2YKL130C SWC7Q06707 132 aa1.26□□□□□ -2.21
SHE2YKL130C RFU1Q08003 200 aa1.26□□□□□ -2.21
SHE2YKL130C ATP14Q12349 124 aa1.26□□□□□ -2.21
SHE2YKL130C RPS25AQ3E792 108 aaPredicted RBP1.26□□□□□ -2.21
SHE2YKL130C RIB3Q99258 208 aa1.26□□□□□ -2.21
SHE2YKL130C RIF1P29539 1916 aa1.26□□□□□ -2.21
SHE2YKL130C UBR1P19812 1950 aa1.25□□□□□ -2.21
SHE2YKL130C MOT1P32333 1867 aa1.25□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 45.2 ms