RNA–Protein interactions for RNA: YJL197W

UBP12, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP12, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP12YJL197W ADE6P38972 1358 aaKnown RBP2.59□□□□□ -2
UBP12YJL197W YHL042WP38729 150 aa2.58□□□□□ -2
UBP12YJL197W FKS1P38631 1876 aaKnown RBP2.58□□□□□ -2
UBP12YJL197W YOR062CP36025 268 aa2.58□□□□□ -2
UBP12YJL197W YGR269WP40326 108 aa2.58□□□□□ -2
UBP12YJL197W KNH1P50112 268 aa2.58□□□□□ -2
UBP12YJL197W YPK9Q12697 1472 aa2.58□□□□□ -2
UBP12YJL197W BUD23P25627 275 aaPredicted RBP2.58□□□□□ -2
UBP12YJL197W YGL230CP53074 147 aa2.58□□□□□ -2
UBP12YJL197W VAR1P02381 398 aa2.57□□□□□ -2
UBP12YJL197W CCS1P40202 249 aaKnown RBP2.57□□□□□ -2
UBP12YJL197W SPO14P36126 1683 aa2.57□□□□□ -2
UBP12YJL197W GAT4P40569 121 aa2.57□□□□□ -2
UBP12YJL197W NMA1Q06178 401 aaKnown RBP2.57□□□□□ -2
UBP12YJL197W IRC19Q07843 230 aa2.57□□□□□ -2
UBP12YJL197W SPO73P40031 143 aa2.57□□□□□ -2
UBP12YJL197W YPR195CQ06594 109 aa2.57□□□□□ -2
UBP12YJL197W YHL018WP38744 120 aaPredicted RBP2.56□□□□□ -2
UBP12YJL197W YHR022CP38763 256 aa2.56□□□□□ -2
UBP12YJL197W YAR029WP39549 74 aa2.56□□□□□ -2
UBP12YJL197W MZM1Q03429 123 aaPredicted RBP2.56□□□□□ -2
UBP12YJL197W YMR030W-AQ3E760 96 aa2.56□□□□□ -2
UBP12YJL197W XRN1P22147 1528 aaKnown RBP2.56□□□□□ -2
UBP12YJL197W SDH4P37298 181 aa2.56□□□□□ -2
UBP12YJL197W YCL001W-AP87012 153 aa2.56□□□□□ -2
UBP12YJL197W YCL001W-BQ96VH2 84 aa2.56□□□□□ -2
UBP12YJL197W FMT1P32785 401 aa2.56□□□□□ -2
UBP12YJL197W KEI1Q06346 221 aa2.56□□□□□ -2
UBP12YJL197W YDL241WQ07738 123 aa2.56□□□□□ -2
UBP12YJL197W TSC11P40061 1430 aa2.55□□□□□ -2
UBP12YJL197W RAF1Q06891 181 aa2.55□□□□□ -2
UBP12YJL197W YOR385WQ08909 290 aa2.55□□□□□ -2
UBP12YJL197W COX8P04039 78 aa2.55□□□□□ -2
UBP12YJL197W YMR252CQ04814 134 aa2.55□□□□□ -2
UBP12YJL197W RDS3Q06835 107 aaPredicted RBP2.55□□□□□ -2
UBP12YJL197W YOR097CQ12274 175 aaPredicted RBP2.55□□□□□ -2
UBP12YJL197W TY2B-BQ12491 1770 aa2.55□□□□□ -2
UBP12YJL197W VPS15P22219 1454 aa2.55□□□□□ -2
UBP12YJL197W YEL067CP39978 195 aa2.55□□□□□ -2
UBP12YJL197W OCA6Q12454 224 aa2.55□□□□□ -2
UBP12YJL197W RPS25BP0C0T4 108 aaKnown RBP2.54□□□□□ -2
UBP12YJL197W MRPL44P19956 98 aa2.54□□□□□ -2
UBP12YJL197W PAM16P42949 149 aa2.54□□□□□ -2
UBP12YJL197W SOM1Q05676 74 aa2.54□□□□□ -2
UBP12YJL197W RPS25AQ3E792 108 aaPredicted RBP2.54□□□□□ -2
UBP12YJL197W SCC2Q04002 1493 aa2.54□□□□□ -2
UBP12YJL197W CYT2Q00873 224 aa2.54□□□□□ -2
UBP12YJL197W RPO21P04050 1733 aaKnown RBP2.54□□□□□ -2
UBP12YJL197W YGL041W-AP0C5N3 154 aa2.54□□□□□ -2
UBP12YJL197W QCR10P37299 77 aa2.54□□□□□ -2
UBP12YJL197W YJL144WP47009 104 aa2.54□□□□□ -2
UBP12YJL197W MDM35O60200 86 aa2.53□□□□□ -2
UBP12YJL197W FYV5P25585 152 aa2.53□□□□□ -2
UBP12YJL197W YDL157CQ12082 118 aa2.53□□□□□ -2
UBP12YJL197W TDA2P40045 126 aa2.53□□□□□ -2
UBP12YJL197W YOR376W-AQ3E805 51 aa2.53□□□□□ -2
UBP12YJL197W TRM732Q03496 1420 aa2.53□□□□□ -2
UBP12YJL197W MSB2P32334 1306 aa2.53□□□□□ -2
UBP12YJL197W STF2P16965 84 aa2.53□□□□□ -2.01
UBP12YJL197W HYP2P23301 157 aaKnown RBP2.53□□□□□ -2.01
UBP12YJL197W YCR099CP25657 155 aa2.53□□□□□ -2.01
UBP12YJL197W GNA1P43577 159 aaPredicted RBP2.53□□□□□ -2.01
UBP12YJL197W DNF3Q12674 1656 aa2.52□□□□□ -2.01
UBP12YJL197W YPR096CO13587 100 aa2.52□□□□□ -2.01
UBP12YJL197W DSE2P38844 325 aa2.52□□□□□ -2.01
UBP12YJL197W UFD4P33202 1483 aa2.52□□□□□ -2.01
UBP12YJL197W NUP170P38181 1502 aa2.52□□□□□ -2.01
UBP12YJL197W HPA3P39979 161 aa2.52□□□□□ -2.01
UBP12YJL197W ERV14P53173 138 aa2.52□□□□□ -2.01
UBP12YJL197W COX5BP00425 151 aa2.52□□□□□ -2.01
UBP12YJL197W SEC59P20048 519 aa2.52□□□□□ -2.01
UBP12YJL197W BAT2P47176 376 aaKnown RBP2.52□□□□□ -2.01
UBP12YJL197W TY1B-DR3Q99231 1755 aa2.51□□□□□ -2.01
UBP12YJL197W HAP1P0CE41 1502 aa2.51□□□□□ -2.01
UBP12YJL197W SNF11P38956 169 aa2.51□□□□□ -2.01
UBP12YJL197W SML1Q04964 104 aa2.51□□□□□ -2.01
UBP12YJL197W RCE1Q03530 315 aa2.51□□□□□ -2.01
UBP12YJL197W TY1B-JR2P47100 1755 aaKnown RBP2.51□□□□□ -2.01
UBP12YJL197W TY1B-ER2Q03619 1755 aa2.51□□□□□ -2.01
UBP12YJL197W TY1B-MR1Q04214 1755 aa2.51□□□□□ -2.01
UBP12YJL197W TY1B-MR2Q04670 1755 aaKnown RBP2.51□□□□□ -2.01
UBP12YJL197W TY1B-LR1Q12088 1755 aaKnown RBP2.51□□□□□ -2.01
UBP12YJL197W TY1B-NL1Q12112 1755 aa2.51□□□□□ -2.01
UBP12YJL197W TY1B-GR1Q12141 1755 aa2.51□□□□□ -2.01
UBP12YJL197W TY1B-BLQ12490 1755 aa2.51□□□□□ -2.01
UBP12YJL197W HSP10P38910 106 aa2.51□□□□□ -2.01
UBP12YJL197W NAT5Q08689 176 aa2.51□□□□□ -2.01
UBP12YJL197W FIT2Q08906 153 aa2.51□□□□□ -2.01
UBP12YJL197W YKL044WP36092 106 aa2.5□□□□□ -2.01
UBP12YJL197W YAE1P47118 141 aaPredicted RBP2.5□□□□□ -2.01
UBP12YJL197W YHR007C-AQ07074 71 aa2.5□□□□□ -2.01
UBP12YJL197W SRL3P36167 246 aa2.5□□□□□ -2.01
UBP12YJL197W YBR090CP38253 122 aa2.5□□□□□ -2.01
UBP12YJL197W YGL149WP53116 101 aa2.5□□□□□ -2.01
UBP12YJL197W GPI19Q04082 140 aa2.49□□□□□ -2.01
UBP12YJL197W ELP6Q04868 273 aa2.49□□□□□ -2.01
UBP12YJL197W YPR153WQ06537 140 aa2.49□□□□□ -2.01
UBP12YJL197W GTT2Q12390 233 aa2.49□□□□□ -2.01
UBP12YJL197W MED11Q99278 115 aa2.49□□□□□ -2.01
UBP12YJL197W DUR1,2P32528 1835 aaKnown RBP2.49□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 24.2 ms