RNA–Protein interactions for RNA: YJL041W

NSP1, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NSP1, Length 2,472 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NSP1YJL041W CTK2P46962 323 aa2.92□□□□□ -1.94
NSP1YJL041W VEL1P53058 206 aa2.92□□□□□ -1.94
NSP1YJL041W MOT3P54785 490 aaKnown RBP2.92□□□□□ -1.94
NSP1YJL041W YMR317WQ04893 1140 aa2.92□□□□□ -1.94
NSP1YJL041W SMT3Q12306 101 aaKnown RBP2.92□□□□□ -1.94
NSP1YJL041W BNI1P41832 1953 aa2.92□□□□□ -1.94
NSP1YJL041W RPL20AP0CX23 172 aaKnown RBP2.92□□□□□ -1.94
NSP1YJL041W RPL20BP0CX24 172 aaPredicted RBP2.92□□□□□ -1.94
NSP1YJL041W SPO13P23624 291 aa2.92□□□□□ -1.94
NSP1YJL041W TOA2P32774 122 aa2.92□□□□□ -1.94
NSP1YJL041W YNL200CP40165 246 aaKnown RBP2.92□□□□□ -1.94
NSP1YJL041W SFT1P43682 97 aa2.92□□□□□ -1.94
NSP1YJL041W FCF1Q05498 189 aaPredicted RBP2.92□□□□□ -1.94
NSP1YJL041W YDL218WQ07629 317 aa2.92□□□□□ -1.94
NSP1YJL041W YOR015WQ12169 119 aa2.92□□□□□ -1.94
NSP1YJL041W RPL2AP0CX45 254 aaKnown RBP2.91□□□□□ -1.94
NSP1YJL041W RPL2BP0CX46 254 aaKnown RBP2.91□□□□□ -1.94
NSP1YJL041W UBC4P15731 148 aa2.91□□□□□ -1.94
NSP1YJL041W YCR006CP25350 157 aa2.91□□□□□ -1.94
NSP1YJL041W YBR144CP34215 104 aa2.91□□□□□ -1.94
NSP1YJL041W KTI12P34253 313 aaKnown RBP2.91□□□□□ -1.94
NSP1YJL041W OM14P38325 134 aa2.91□□□□□ -1.94
NSP1YJL041W PEX22P39718 180 aa2.91□□□□□ -1.94
NSP1YJL041W SKI6P46948 246 aaPredicted RBP2.91□□□□□ -1.94
NSP1YJL041W SPG1P50088 95 aa2.91□□□□□ -1.94
NSP1YJL041W YGR219WP53307 113 aa2.91□□□□□ -1.94
NSP1YJL041W RPL21AQ02753 160 aaKnown RBP2.91□□□□□ -1.94
NSP1YJL041W YDL242WQ07746 117 aa2.91□□□□□ -1.94
NSP1YJL041W RPL21BQ12672 160 aaKnown RBP2.91□□□□□ -1.94
NSP1YJL041W AQY1P0CD91 305 aa2.91□□□□□ -1.94
NSP1YJL041W RPL18AP0CX49 186 aaKnown RBP2.91□□□□□ -1.94
NSP1YJL041W RPL18BP0CX50 186 aaKnown RBP2.91□□□□□ -1.94
NSP1YJL041W QRI5P32344 111 aa2.91□□□□□ -1.94
NSP1YJL041W PHO88P38264 188 aaPredicted RBP2.91□□□□□ -1.94
NSP1YJL041W YNL217WP40152 326 aa2.91□□□□□ -1.94
NSP1YJL041W CWP2P43497 92 aa2.91□□□□□ -1.94
NSP1YJL041W BRP1P53194 125 aa2.91□□□□□ -1.94
NSP1YJL041W SPO24Q3E752 67 aa2.91□□□□□ -1.94
NSP1YJL041W ARF2P19146 181 aaKnown RBP2.9□□□□□ -1.95
NSP1YJL041W MRS4P23500 304 aa2.9□□□□□ -1.95
NSP1YJL041W ELO1P39540 310 aa2.9□□□□□ -1.95
NSP1YJL041W MRPL49P40858 161 aaPredicted RBP2.9□□□□□ -1.95
NSP1YJL041W YLR152CP54072 576 aa2.9□□□□□ -1.95
NSP1YJL041W ATP19P81451 68 aa2.9□□□□□ -1.95
NSP1YJL041W LPP1Q04396 274 aa2.9□□□□□ -1.95
NSP1YJL041W SLH1P53327 1967 aaKnown RBP2.9□□□□□ -1.95
NSP1YJL041W YCR050CP25630 102 aa2.9□□□□□ -1.95
NSP1YJL041W GPI18P38211 433 aa2.9□□□□□ -1.95
NSP1YJL041W YDR102CQ03864 110 aa2.9□□□□□ -1.95
NSP1YJL041W GPI19Q04082 140 aa2.9□□□□□ -1.95
NSP1YJL041W STP3Q05937 343 aa2.9□□□□□ -1.95
NSP1YJL041W YMR175W-AQ3E766 64 aa2.9□□□□□ -1.95
NSP1YJL041W KSH1Q8TGJ3 72 aa2.9□□□□□ -1.95
NSP1YJL041W CTR2P38865 189 aa2.89□□□□□ -1.95
NSP1YJL041W FLO5P38894 1075 aa2.89□□□□□ -1.95
NSP1YJL041W YFR054CP43622 192 aa2.89□□□□□ -1.95
NSP1YJL041W HAL1Q01766 294 aa2.89□□□□□ -1.95
NSP1YJL041W LSM6Q06406 86 aaKnown RBP2.89□□□□□ -1.95
NSP1YJL041W USV1Q12132 391 aa2.89□□□□□ -1.95
NSP1YJL041W POC4Q12245 148 aaPredicted RBP2.89□□□□□ -1.95
NSP1YJL041W COX17Q12287 69 aa2.89□□□□□ -1.95
NSP1YJL041W YBL059WP34224 193 aa2.88□□□□□ -1.95
NSP1YJL041W YRA2P36036 203 aaKnown RBP RIP-Chip data2.88□□□□□ -1.95not detected
NSP1YJL041W RPS10BP46784 105 aaKnown RBP2.88□□□□□ -1.95
NSP1YJL041W CPD1P53314 239 aa2.88□□□□□ -1.95
NSP1YJL041W YMR252CQ04814 134 aa2.88□□□□□ -1.95
NSP1YJL041W YLR042CQ07990 161 aa2.88□□□□□ -1.95
NSP1YJL041W SUT2Q12286 268 aa2.88□□□□□ -1.95
NSP1YJL041W YCL021W-AQ96VH3 125 aa2.88□□□□□ -1.95
NSP1YJL041W SOD1P00445 154 aaKnown RBP2.88□□□□□ -1.95
NSP1YJL041W APS1P35181 156 aa2.88□□□□□ -1.95
NSP1YJL041W SRX1P36077 127 aa2.88□□□□□ -1.95
NSP1YJL041W YHL005CP38752 130 aa2.88□□□□□ -1.95
NSP1YJL041W SGN1P40561 250 aaKnown RBP RIP-Chip data2.88□□□□□ -1.95not detected
NSP1YJL041W UBC13P52490 153 aa2.88□□□□□ -1.95
NSP1YJL041W YDR042CQ03205 200 aa2.88□□□□□ -1.95
NSP1YJL041W MZM1Q03429 123 aaPredicted RBP2.88□□□□□ -1.95
NSP1YJL041W YMR320WQ04897 101 aa2.88□□□□□ -1.95
NSP1YJL041W FZF1P32805 299 aa2.87□□□□□ -1.95
NSP1YJL041W ARC40P38328 384 aaKnown RBP2.87□□□□□ -1.95
NSP1YJL041W PCL5P38794 229 aa2.87□□□□□ -1.95
NSP1YJL041W GGC1P38988 300 aa2.87□□□□□ -1.95
NSP1YJL041W HST4P53688 370 aa2.87□□□□□ -1.95
NSP1YJL041W RLM1Q12224 676 aa2.87□□□□□ -1.95
NSP1YJL041W YDR381C-AQ3E6R5 114 aa2.87□□□□□ -1.95
NSP1YJL041W AUR1P36107 401 aaPredicted RBP2.87□□□□□ -1.95
NSP1YJL041W PAM17P36147 197 aa2.87□□□□□ -1.95
NSP1YJL041W SPI1P40092 148 aa2.87□□□□□ -1.95
NSP1YJL041W CDC1P40986 491 aa2.87□□□□□ -1.95
NSP1YJL041W MSO1P53604 210 aaKnown RBP2.87□□□□□ -1.95
NSP1YJL041W TIM18Q08749 192 aa2.87□□□□□ -1.95
NSP1YJL041W ARF1P11076 181 aaKnown RBP2.86□□□□□ -1.95
NSP1YJL041W MBB1P39534 108 aa2.86□□□□□ -1.95
NSP1YJL041W IES4Q08561 116 aa2.86□□□□□ -1.95
NSP1YJL041W YOR387CQ08910 206 aa2.86□□□□□ -1.95
NSP1YJL041W MRH1Q12117 320 aaPredicted RBP2.86□□□□□ -1.95
NSP1YJL041W YDL211CQ12121 372 aa2.86□□□□□ -1.95
NSP1YJL041W AYT1Q12226 474 aa2.86□□□□□ -1.95
NSP1YJL041W YPS3Q12303 508 aa2.86□□□□□ -1.95
NSP1YJL041W RPL30P14120 105 aaKnown RBP2.86□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms