RNA–Protein interactions for RNA: YIL148W

RPL40A, Transcript of Ubiquitin-ribosomal 60S subunit protein L40A fusion protein, yeastyeast

Gene RPL40A, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40AYIL148W LCL2Q08045 131 aa0.88□□□□□ -2.27
RPL40AYIL148W ZEO1Q08245 113 aa0.88□□□□□ -2.27
RPL40AYIL148W FYV7Q12247 151 aa0.88□□□□□ -2.27
RPL40AYIL148W RPO41P13433 1351 aaKnown RBP0.87□□□□□ -2.27
RPL40AYIL148W ANB1P19211 157 aa0.87□□□□□ -2.27
RPL40AYIL148W RPS1BP23248 255 aaKnown RBP0.87□□□□□ -2.27
RPL40AYIL148W HYM1P32464 399 aa0.87□□□□□ -2.27
RPL40AYIL148W RPS1AP33442 255 aaKnown RBP0.87□□□□□ -2.27
RPL40AYIL148W RPS20P38701 121 aaKnown RBP0.87□□□□□ -2.27
RPL40AYIL148W YJL009WP47078 108 aa0.87□□□□□ -2.27
RPL40AYIL148W LSM8P47093 109 aaKnown RBP0.87□□□□□ -2.27
RPL40AYIL148W MPC1P53157 130 aaKnown RBP0.87□□□□□ -2.27
RPL40AYIL148W YNL019CP53975 284 aa0.87□□□□□ -2.27
RPL40AYIL148W TIM8P57744 87 aa0.87□□□□□ -2.27
RPL40AYIL148W AIM11P87275 137 aa0.87□□□□□ -2.27
RPL40AYIL148W SAE3P89114 91 aa0.87□□□□□ -2.27
RPL40AYIL148W RUB1Q03919 77 aa0.87□□□□□ -2.27
RPL40AYIL148W IRC21Q04772 201 aa0.87□□□□□ -2.27
RPL40AYIL148W YDR278CQ05612 105 aa0.87□□□□□ -2.27
RPL40AYIL148W SPC3Q12133 184 aa0.87□□□□□ -2.27
RPL40AYIL148W DDP1Q99321 188 aaKnown RBP0.87□□□□□ -2.27
RPL40AYIL148W HSL1P34244 1518 aa0.86□□□□□ -2.27
RPL40AYIL148W RPL33AP05744 107 aaKnown RBP0.86□□□□□ -2.27
RPL40AYIL148W HAP2P06774 265 aa0.86□□□□□ -2.27
RPL40AYIL148W RPB11P38902 120 aa0.86□□□□□ -2.27
RPL40AYIL148W YER137CP40083 148 aaKnown RBP0.86□□□□□ -2.27
RPL40AYIL148W HPM1P40481 377 aa0.86□□□□□ -2.27
RPL40AYIL148W ELC1Q03071 99 aa0.86□□□□□ -2.27
RPL40AYIL148W YIR021W-AQ3E739 70 aa0.86□□□□□ -2.27
RPL40AYIL148W YLR099W-AQ3E798 87 aa0.86□□□□□ -2.27
RPL40AYIL148W KTI11Q3E840 82 aa0.86□□□□□ -2.27
RPL40AYIL148W MDS3P53094 1487 aa0.86□□□□□ -2.27
RPL40AYIL148W RPS22AP0C0W1 130 aaKnown RBP0.85□□□□□ -2.27
RPL40AYIL148W MRPL44P19956 98 aa0.85□□□□□ -2.27
RPL40AYIL148W EMC4P53073 190 aa0.85□□□□□ -2.27
RPL40AYIL148W SOM1Q05676 74 aa0.85□□□□□ -2.27
RPL40AYIL148W LDB18Q07887 179 aa0.85□□□□□ -2.27
RPL40AYIL148W NAT5Q08689 176 aa0.85□□□□□ -2.27
RPL40AYIL148W YLR118CQ12354 227 aa0.85□□□□□ -2.27
RPL40AYIL148W RTR2Q12378 196 aa0.85□□□□□ -2.27
RPL40AYIL148W RPS22BQ3E7Y3 130 aaKnown RBP0.85□□□□□ -2.27
RPL40AYIL148W YNL277W-AQ3E7Z0 62 aa0.85□□□□□ -2.27
RPL40AYIL148W ADK1P07170 222 aaKnown RBP0.84□□□□□ -2.27
RPL40AYIL148W GSP1P32835 219 aaKnown RBP0.84□□□□□ -2.27
RPL40AYIL148W RPL14AP36105 138 aaKnown RBP0.84□□□□□ -2.27
RPL40AYIL148W RPL14BP38754 138 aaKnown RBP0.84□□□□□ -2.27
RPL40AYIL148W RPS12P48589 143 aaKnown RBP0.84□□□□□ -2.27
RPL40AYIL148W TVP18Q04767 167 aa0.84□□□□□ -2.27
RPL40AYIL148W YHR213W-BQ8TGK1 99 aa0.84□□□□□ -2.27
RPL40AYIL148W RIB3Q99258 208 aa0.84□□□□□ -2.27
RPL40AYIL148W SPP41P38904 1435 aa0.83□□□□□ -2.28
RPL40AYIL148W COX5BP00425 151 aa0.83□□□□□ -2.28
RPL40AYIL148W YER188C-AP0C0V2 99 aa0.83□□□□□ -2.28
RPL40AYIL148W YOL013W-AP0C272 63 aaPredicted RBP0.83□□□□□ -2.28
RPL40AYIL148W FYV5P25585 152 aa0.83□□□□□ -2.28
RPL40AYIL148W LHP1P33399 275 aaKnown RBP0.83□□□□□ -2.28
RPL40AYIL148W UTP11P34247 250 aaPredicted RBP0.83□□□□□ -2.28
RPL40AYIL148W ATG8P38182 117 aaRIP-Chip data0.83□□□□□ -2.28not detected
RPL40AYIL148W TDA2P40045 126 aa0.83□□□□□ -2.28
RPL40AYIL148W PHS1P40857 217 aa0.83□□□□□ -2.28
RPL40AYIL148W MGR2Q02889 113 aa0.83□□□□□ -2.28
RPL40AYIL148W MHF1Q3E835 90 aa0.83□□□□□ -2.28
RPL40AYIL148W YCL001W-BQ96VH2 84 aa0.83□□□□□ -2.28
RPL40AYIL148W MYO2P19524 1574 aaKnown RBP0.83□□□□□ -2.28
RPL40AYIL148W YCR050CP25630 102 aa0.82□□□□□ -2.28
RPL40AYIL148W YHR140WP38842 239 aa0.82□□□□□ -2.28
RPL40AYIL148W HSP10P38910 106 aa0.82□□□□□ -2.28
RPL40AYIL148W SFT1P43682 97 aa0.82□□□□□ -2.28
RPL40AYIL148W YLR042CQ07990 161 aa0.82□□□□□ -2.28
RPL40AYIL148W SNT2P53127 1403 aa0.81□□□□□ -2.28
RPL40AYIL148W PFY1P07274 126 aa0.81□□□□□ -2.28
RPL40AYIL148W YGL014C-AP0C5N1 53 aa0.81□□□□□ -2.28
RPL40AYIL148W HAP3P13434 144 aa0.81□□□□□ -2.28
RPL40AYIL148W FUN14P18411 198 aa0.81□□□□□ -2.28
RPL40AYIL148W SEC59P20048 519 aa0.81□□□□□ -2.28
RPL40AYIL148W YCR101CP25607 182 aa0.81□□□□□ -2.28
RPL40AYIL148W SFT2P38166 215 aa0.81□□□□□ -2.28
RPL40AYIL148W PAM16P42949 149 aa0.81□□□□□ -2.28
RPL40AYIL148W YGL149WP53116 101 aa0.81□□□□□ -2.28
RPL40AYIL148W ERV14P53173 138 aa0.81□□□□□ -2.28
RPL40AYIL148W YCL001W-AP87012 153 aa0.81□□□□□ -2.28
RPL40AYIL148W GPI19Q04082 140 aa0.81□□□□□ -2.28
RPL40AYIL148W YOR385WQ08909 290 aa0.81□□□□□ -2.28
RPL40AYIL148W COA6Q3E846 104 aa0.81□□□□□ -2.28
RPL40AYIL148W ROM2P51862 1356 aaKnown RBP0.81□□□□□ -2.28
RPL40AYIL148W YHR213WP0CI67 198 aa0.8□□□□□ -2.28
RPL40AYIL148W YCR099CP25657 155 aa0.8□□□□□ -2.28
RPL40AYIL148W SRB6P32570 121 aa0.8□□□□□ -2.28
RPL40AYIL148W MRPL11P36521 249 aaPredicted RBP0.8□□□□□ -2.28
RPL40AYIL148W SNF11P38956 169 aa0.8□□□□□ -2.28
RPL40AYIL148W YAR029WP39549 74 aa0.8□□□□□ -2.28
RPL40AYIL148W YAL064WP39711 94 aa0.8□□□□□ -2.28
RPL40AYIL148W VMA21P41806 77 aa0.8□□□□□ -2.28
RPL40AYIL148W GNA1P43577 159 aaPredicted RBP0.8□□□□□ -2.28
RPL40AYIL148W BRP1P53194 125 aa0.8□□□□□ -2.28
RPL40AYIL148W YMR122CQ03879 124 aa0.8□□□□□ -2.28
RPL40AYIL148W SEN15Q04675 128 aa0.8□□□□□ -2.28
RPL40AYIL148W SWC7Q06707 132 aa0.8□□□□□ -2.28
RPL40AYIL148W YOR289WQ12012 251 aaPredicted RBP0.8□□□□□ -2.28
RPL40AYIL148W MED11Q99278 115 aa0.8□□□□□ -2.28
Retrieved 100 of 5,963 RNA–protein pairs in 50.1 ms