RNA–Protein interactions for RNA: YIL143C

SSL2, Transcript of Component of RNA polymerase transcription factor TFIIH holoenzyme, yeastyeast

Gene SSL2, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSL2YIL143C YLR363W-AQ3E747 85 aa7.13□□□□□ -1.27
SSL2YIL143C YFL068WP0CX99 160 aa7.13□□□□□ -1.27
SSL2YIL143C YLL066W-AP0CY00 160 aa7.13□□□□□ -1.27
SSL2YIL143C YLL067W-AP0CY01 160 aa7.13□□□□□ -1.27
SSL2YIL143C FEN2P25621 512 aaKnown RBP7.13□□□□□ -1.27
SSL2YIL143C YBL071CP38185 102 aa7.13□□□□□ -1.27
SSL2YIL143C FYV4P38783 130 aaPredicted RBP7.13□□□□□ -1.27
SSL2YIL143C YGR018CP53211 109 aa7.13□□□□□ -1.27
SSL2YIL143C YTH1Q06102 208 aaPredicted RBP7.13□□□□□ -1.27
SSL2YIL143C RPL39P04650 51 aa7.12□□□□□ -1.27
SSL2YIL143C SFT2P38166 215 aa7.12□□□□□ -1.27
SSL2YIL143C MRX11Q03079 207 aa7.12□□□□□ -1.27
SSL2YIL143C IRC25Q07951 179 aa7.12□□□□□ -1.27
SSL2YIL143C MRP49P32388 137 aa7.11□□□□□ -1.27
SSL2YIL143C PAU7P39545 55 aa7.11□□□□□ -1.27
SSL2YIL143C YPI1P43587 155 aa7.11□□□□□ -1.27
SSL2YIL143C YFR057WP43625 151 aa7.11□□□□□ -1.27
SSL2YIL143C VPS71Q03433 280 aa7.11□□□□□ -1.27
SSL2YIL143C MDM10P18409 493 aa7.11□□□□□ -1.27
SSL2YIL143C CRZ1P53968 678 aa7.11□□□□□ -1.27
SSL2YIL143C RPL27AP0C2H6 136 aaKnown RBP7.1□□□□□ -1.27
SSL2YIL143C RPL27BP0C2H7 136 aaKnown RBP7.1□□□□□ -1.27
SSL2YIL143C YMR141CP40211 102 aa7.1□□□□□ -1.27
SSL2YIL143C CAB4P53332 305 aa7.1□□□□□ -1.27
SSL2YIL143C YPS1P32329 569 aa7.1□□□□□ -1.27
SSL2YIL143C SOR1P35497 357 aaKnown RBP7.1□□□□□ -1.27
SSL2YIL143C LST8P41318 303 aa7.1□□□□□ -1.27
SSL2YIL143C DAD4P69851 72 aa7.1□□□□□ -1.27
SSL2YIL143C SOR2Q07786 357 aa7.1□□□□□ -1.27
SSL2YIL143C AYT1Q12226 474 aa7.1□□□□□ -1.27
SSL2YIL143C YMR105W-AQ8TGS8 64 aa7.1□□□□□ -1.27
SSL2YIL143C HEM4P06174 275 aa7.09□□□□□ -1.27
SSL2YIL143C PRS4P38063 326 aaPredicted RBP7.09□□□□□ -1.27
SSL2YIL143C YNL198CP40166 100 aa7.09□□□□□ -1.27
SSL2YIL143C BET5Q03630 159 aa7.09□□□□□ -1.27
SSL2YIL143C GAT3Q07928 141 aa7.09□□□□□ -1.27
SSL2YIL143C YPR117WQ06116 2489 aa7.09□□□□□ -1.27
SSL2YIL143C YGR017WP53210 297 aa7.08□□□□□ -1.28
SSL2YIL143C ATG39Q06159 398 aa7.08□□□□□ -1.28
SSL2YIL143C YPL257WQ08974 193 aa7.08□□□□□ -1.28
SSL2YIL143C PAI3P01094 68 aa7.08□□□□□ -1.28
SSL2YIL143C CYC3P06182 269 aa7.08□□□□□ -1.28
SSL2YIL143C HST4P53688 370 aa7.08□□□□□ -1.28
SSL2YIL143C RDL1Q12305 139 aaKnown RBP7.08□□□□□ -1.28
SSL2YIL143C ANB1P19211 157 aa7.07□□□□□ -1.28
SSL2YIL143C ADH6Q04894 360 aaKnown RBP7.07□□□□□ -1.28
SSL2YIL143C DAD1Q12248 94 aa7.07□□□□□ -1.28
SSL2YIL143C YKL183C-AQ3E765 70 aa7.07□□□□□ -1.28
SSL2YIL143C YBR182C-AQ8TGU6 64 aa7.07□□□□□ -1.28
SSL2YIL143C RPL12AP0CX53 165 aaKnown RBP7.06□□□□□ -1.28
SSL2YIL143C RPL12BP0CX54 165 aa7.06□□□□□ -1.28
SSL2YIL143C CPR1P14832 162 aaKnown RBP7.06□□□□□ -1.28
SSL2YIL143C PRE3P38624 215 aa7.06□□□□□ -1.28
SSL2YIL143C PET8P38921 284 aa7.06□□□□□ -1.28
SSL2YIL143C RPS23AP0CX29 145 aaKnown RBP7.06□□□□□ -1.28
SSL2YIL143C RPS23BP0CX30 145 aa7.06□□□□□ -1.28
SSL2YIL143C TIR2P33890 251 aa7.06□□□□□ -1.28
SSL2YIL143C CMC1P36064 111 aa7.06□□□□□ -1.28
SSL2YIL143C MIC12P38341 106 aa7.06□□□□□ -1.28
SSL2YIL143C YIL014C-AQ02598 104 aa7.06□□□□□ -1.28
SSL2YIL143C SDH7Q04401 133 aa7.06□□□□□ -1.28
SSL2YIL143C YML079WQ03629 201 aa7.05□□□□□ -1.28
SSL2YIL143C RXT3Q07458 294 aa7.05□□□□□ -1.28
SSL2YIL143C HTL1Q9URQ5 78 aa7.05□□□□□ -1.28
SSL2YIL143C YKR045CP36138 183 aa7.05□□□□□ -1.28
SSL2YIL143C YDL218WQ07629 317 aa7.05□□□□□ -1.28
SSL2YIL143C ARO2P28777 376 aaKnown RBP7.04□□□□□ -1.28
SSL2YIL143C RPL15BP54780 204 aaPredicted RBP7.04□□□□□ -1.28
SSL2YIL143C ISU2Q12056 156 aa7.04□□□□□ -1.28
SSL2YIL143C CPT1P17898 393 aa7.04□□□□□ -1.28
SSL2YIL143C CTR2P38865 189 aa7.04□□□□□ -1.28
SSL2YIL143C YIL012WP40551 113 aa7.04□□□□□ -1.28
SSL2YIL143C SLO1Q3E784 85 aa7.04□□□□□ -1.28
SSL2YIL143C YLR361C-AQ3E795 98 aa7.04□□□□□ -1.28
SSL2YIL143C APS1P35181 156 aa7.03□□□□□ -1.28
SSL2YIL143C YKR032WP36127 104 aa7.03□□□□□ -1.28
SSL2YIL143C YNL194CP40169 301 aa7.03□□□□□ -1.28
SSL2YIL143C YFL051CP43552 160 aa7.03□□□□□ -1.28
SSL2YIL143C UTP23Q12339 254 aaKnown RBP7.03□□□□□ -1.28
SSL2YIL143C MBB1P39534 108 aa7.03□□□□□ -1.28
SSL2YIL143C YHR213WP0CI67 198 aa7.02□□□□□ -1.29
SSL2YIL143C MLF3P32047 452 aa7.02□□□□□ -1.29
SSL2YIL143C UGX2P32772 223 aa7.02□□□□□ -1.29
SSL2YIL143C ECM33P38248 429 aaKnown RBP7.02□□□□□ -1.29
SSL2YIL143C YIL102C-AQ2V2P5 75 aa7.02□□□□□ -1.29
SSL2YIL143C IRA1P18963 3092 aa7.02□□□□□ -1.29
SSL2YIL143C RPP2AP05319 106 aaKnown RBP7.01□□□□□ -1.29
SSL2YIL143C YCR023CP25351 611 aa7.01□□□□□ -1.29
SSL2YIL143C YJL213WP40896 331 aa7.01□□□□□ -1.29
SSL2YIL143C YHL044WP38727 235 aa7.01□□□□□ -1.29
SSL2YIL143C ADH1P00330 348 aaKnown RBP7□□□□□ -1.29
SSL2YIL143C CDC43P18898 376 aa7□□□□□ -1.29
SSL2YIL143C RRT1P38192 103 aa7□□□□□ -1.29
SSL2YIL143C YBR220CP38318 560 aa7□□□□□ -1.29
SSL2YIL143C YDR042CQ03205 200 aa7□□□□□ -1.29
SSL2YIL143C DFM1Q12743 341 aaKnown RBP7□□□□□ -1.29
SSL2YIL143C HYP2P23301 157 aaKnown RBP7□□□□□ -1.29
SSL2YIL143C NCA3P46955 337 aa7□□□□□ -1.29
SSL2YIL143C IMP2P46972 177 aa7□□□□□ -1.29
SSL2YIL143C MST27P53176 234 aa7□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 65.4 ms