RNA–Protein interactions for RNA: YHR056C

RSC30, Transcript of Component of the RSC chromatin remodeling complex, yeast

Gene RSC30, Length 2,652 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSC30	YHR056C	RRT7	Q07829	113 aa		3.65	□□□□□ -1.82
RSC30	YHR056C	YBL112C	Q3E7Y4	105 aa		3.65	□□□□□ -1.82
RSC30	YHR056C	RPS2	P25443	254 aa	Known RBP	3.65	□□□□□ -1.83
RSC30	YHR056C	HMX1	P32339	317 aa		3.65	□□□□□ -1.83
RSC30	YHR056C	RPL14A	P36105	138 aa	Known RBP	3.65	□□□□□ -1.83
RSC30	YHR056C	RPL14B	P38754	138 aa	Known RBP	3.65	□□□□□ -1.83
RSC30	YHR056C	DID2	P69771	204 aa		3.65	□□□□□ -1.83
RSC30	YHR056C	YDR010C	Q12426	110 aa		3.65	□□□□□ -1.83
RSC30	YHR056C	YNR066C	P53752	436 aa		3.64	□□□□□ -1.83
RSC30	YHR056C	DAD1	Q12248	94 aa		3.64	□□□□□ -1.83
RSC30	YHR056C	FCF1	Q05498	189 aa	Predicted RBP	3.64	□□□□□ -1.83
RSC30	YHR056C	YLR194C	Q05777	254 aa		3.64	□□□□□ -1.83
RSC30	YHR056C	TIM22	Q12328	207 aa		3.64	□□□□□ -1.83
RSC30	YHR056C	YPR053C	Q6Q5F3	151 aa		3.64	□□□□□ -1.83
RSC30	YHR056C	HYP2	P23301	157 aa	Known RBP	3.63	□□□□□ -1.83
RSC30	YHR056C	YPT10	P38146	199 aa		3.63	□□□□□ -1.83
RSC30	YHR056C	YBR292C	P38357	123 aa		3.63	□□□□□ -1.83
RSC30	YHR056C	MRPS17	Q03246	237 aa	Predicted RBP	3.63	□□□□□ -1.83
RSC30	YHR056C	SEC59	P20048	519 aa		3.62	□□□□□ -1.83
RSC30	YHR056C	RPL32	P38061	130 aa	Known RBP	3.62	□□□□□ -1.83
RSC30	YHR056C	YIL059C	P40520	121 aa		3.62	□□□□□ -1.83
RSC30	YHR056C	DIA1	P54005	336 aa		3.62	□□□□□ -1.83
RSC30	YHR056C	DAD4	P69851	72 aa		3.61	□□□□□ -1.83
RSC30	YHR056C	TIR1	P10863	254 aa		3.61	□□□□□ -1.83
RSC30	YHR056C	TY1A-DR4	O74302	440 aa		3.6	□□□□□ -1.83
RSC30	YHR056C	TY1A-A	P0CX57	440 aa		3.6	□□□□□ -1.83
RSC30	YHR056C	TY1A-PR1	P0CX58	440 aa		3.6	□□□□□ -1.83
RSC30	YHR056C	TY1A-OR	P0CX59	440 aa		3.6	□□□□□ -1.83
RSC30	YHR056C	TY1A-PR2	P0CX60	440 aa		3.6	□□□□□ -1.83
RSC30	YHR056C	TY1A-DR5	P0CX65	440 aa		3.6	□□□□□ -1.83
RSC30	YHR056C	TY1A-ER2	P0CX66	440 aa		3.6	□□□□□ -1.83
RSC30	YHR056C	TY1A-GR3	P0CX67	440 aa		3.6	□□□□□ -1.83
RSC30	YHR056C	TY1A-LR1	P0CX68	440 aa		3.6	□□□□□ -1.83
RSC30	YHR056C	TY1A-MR2	P0CX69	440 aa		3.6	□□□□□ -1.83
RSC30	YHR056C	YPT53	P36019	220 aa		3.6	□□□□□ -1.83
RSC30	YHR056C	AIM19	P40502	157 aa		3.6	□□□□□ -1.83
RSC30	YHR056C	ARC15	P40518	154 aa	RIP-Chip data	3.6	□□□□□ -1.83	not detected
RSC30	YHR056C	TY1A-JR2	P47099	440 aa		3.6	□□□□□ -1.83
RSC30	YHR056C	TY1A-DR1	Q03856	440 aa		3.6	□□□□□ -1.83
RSC30	YHR056C	TY1A-ML1	Q04706	440 aa	Known RBP	3.6	□□□□□ -1.83
RSC30	YHR056C	TY1A-GR2	Q12485	440 aa		3.6	□□□□□ -1.83
RSC30	YHR056C	CDC50	P25656	391 aa		3.6	□□□□□ -1.83
RSC30	YHR056C	SMD3	P43321	101 aa	Known RBP	3.6	□□□□□ -1.83
RSC30	YHR056C	YGR026W	P53217	278 aa		3.6	□□□□□ -1.83
RSC30	YHR056C	YCL001W-A	P87012	153 aa		3.6	□□□□□ -1.83
RSC30	YHR056C	POF1	P25576	258 aa		3.59	□□□□□ -1.83
RSC30	YHR056C	TIP1	P27654	210 aa	Predicted RBP	3.59	□□□□□ -1.83
RSC30	YHR056C	RPS0A	P32905	252 aa	Known RBP	3.59	□□□□□ -1.83
RSC30	YHR056C	SRB7	P47822	140 aa		3.59	□□□□□ -1.83
RSC30	YHR056C	FCF2	Q12035	217 aa	Predicted RBP	3.59	□□□□□ -1.83
RSC30	YHR056C	TAL1	P15019	335 aa	Known RBP	3.58	□□□□□ -1.84
RSC30	YHR056C	RPC10	P40422	70 aa		3.58	□□□□□ -1.84
RSC30	YHR056C	CMC4	Q3E7A9	73 aa		3.58	□□□□□ -1.84
RSC30	YHR056C	SPO13	P23624	291 aa		3.58	□□□□□ -1.84
RSC30	YHR056C	CYB5	P40312	120 aa		3.58	□□□□□ -1.84
RSC30	YHR056C	CIN5	P40917	295 aa		3.58	□□□□□ -1.84
RSC30	YHR056C	MOG1	P47123	218 aa		3.58	□□□□□ -1.84
RSC30	YHR056C	OST3	P48439	350 aa		3.58	□□□□□ -1.84
RSC30	YHR056C	ATP19	P81451	68 aa		3.58	□□□□□ -1.84
RSC30	YHR056C	RAV2	Q03956	351 aa		3.58	□□□□□ -1.84
RSC30	YHR056C	RPN13	O13563	156 aa		3.57	□□□□□ -1.84
RSC30	YHR056C	YMR141C	P40211	102 aa		3.57	□□□□□ -1.84
RSC30	YHR056C	YKE4	P40544	346 aa		3.57	□□□□□ -1.84
RSC30	YHR056C	RIB5	P38145	238 aa		3.57	□□□□□ -1.84
RSC30	YHR056C	CDC43	P18898	376 aa		3.57	□□□□□ -1.84
RSC30	YHR056C	YOR105W	Q08504	108 aa		3.57	□□□□□ -1.84
RSC30	YHR056C	DDR48	P18899	430 aa	Known RBP	3.56	□□□□□ -1.84
RSC30	YHR056C	YBR085C-A	O43137	85 aa		3.56	□□□□□ -1.84
RSC30	YHR056C	RPL42A	P0CX27	106 aa	Known RBP	3.56	□□□□□ -1.84
RSC30	YHR056C	RPL42B	P0CX28	106 aa	Known RBP	3.56	□□□□□ -1.84
RSC30	YHR056C	YGL041C-B	Q3E750	60 aa		3.56	□□□□□ -1.84
RSC30	YHR056C	YLR415C	O13578	112 aa		3.55	□□□□□ -1.84
RSC30	YHR056C	RPS22A	P0C0W1	130 aa	Known RBP	3.55	□□□□□ -1.84
RSC30	YHR056C	SNA2	P56508	79 aa		3.55	□□□□□ -1.84
RSC30	YHR056C	FRS1	P15624	595 aa	Known RBP	3.55	□□□□□ -1.84
RSC30	YHR056C	YFR045W	P43617	309 aa		3.55	□□□□□ -1.84
RSC30	YHR056C	YAR029W	P39549	74 aa		3.54	□□□□□ -1.84
RSC30	YHR056C	HAC1	P41546	238 aa		3.54	□□□□□ -1.84
RSC30	YHR056C	LOC1	P43586	204 aa	Predicted RBP	3.54	□□□□□ -1.84
RSC30	YHR056C	ENV10	Q99382	181 aa		3.54	□□□□□ -1.84
RSC30	YHR056C	YHR140W	P38842	239 aa		3.53	□□□□□ -1.84
RSC30	YHR056C	ECM12	O13529	151 aa		3.53	□□□□□ -1.84
RSC30	YHR056C	MRPL31	P14063	131 aa	Predicted RBP	3.53	□□□□□ -1.84
RSC30	YHR056C	SEC72	P39742	193 aa	Known RBP	3.52	□□□□□ -1.85
RSC30	YHR056C	YMR175W-A	Q3E766	64 aa		3.52	□□□□□ -1.85
RSC30	YHR056C	ACB1	P31787	87 aa		3.52	□□□□□ -1.85
RSC30	YHR056C	SHG1	P38337	142 aa		3.52	□□□□□ -1.85
RSC30	YHR056C	SPC25	P40014	221 aa		3.52	□□□□□ -1.85
RSC30	YHR056C	POG1	P40473	351 aa		3.52	□□□□□ -1.85
RSC30	YHR056C	UBI4	P0CG63	381 aa	Known RBP	3.51	□□□□□ -1.85
RSC30	YHR056C	YER076C	P40049	302 aa		3.51	□□□□□ -1.85
RSC30	YHR056C	TY1A-DR3	Q12441	440 aa		3.51	□□□□□ -1.85
RSC30	YHR056C	GPI19	Q04082	140 aa		3.51	□□□□□ -1.85
RSC30	YHR056C	RPF1	P38805	295 aa	Known RBP	3.5	□□□□□ -1.85
RSC30	YHR056C	PEX22	P39718	180 aa		3.5	□□□□□ -1.85
RSC30	YHR056C	YGL117W	P53133	265 aa		3.5	□□□□□ -1.85
RSC30	YHR056C	SDS23	P53172	527 aa		3.5	□□□□□ -1.85
RSC30	YHR056C	PAU4	P53427	120 aa		3.5	□□□□□ -1.85
RSC30	YHR056C	SMP1	P38128	452 aa		3.5	□□□□□ -1.85
RSC30	YHR056C	SNU23	Q12368	194 aa	Predicted RBP	3.5	□□□□□ -1.85

Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms