RNA–Protein interactions for RNA: YHR039C-A

VMA10, Transcript of Subunit G of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA10, Length 345 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA10	YHR039C-A	GTT1	P40582	234 aa		1.69	□□□□□ -2.14
VMA10	YHR039C-A	FIP1	P45976	327 aa		1.69	□□□□□ -2.14
VMA10	YHR039C-A	GAL83	Q04739	417 aa		1.69	□□□□□ -2.14
VMA10	YHR039C-A	COA4	Q05809	96 aa		1.69	□□□□□ -2.14
VMA10	YHR039C-A	YPR013C	Q12145	317 aa		1.69	□□□□□ -2.14
VMA10	YHR039C-A	HUT1	Q12520	339 aa		1.69	□□□□□ -2.14
VMA10	YHR039C-A	RPL13A	Q12690	199 aa	Predicted RBP	1.69	□□□□□ -2.14
VMA10	YHR039C-A	MMS1	Q06211	1407 aa		1.68	□□□□□ -2.14
VMA10	YHR039C-A	HAP1	P0CE41	1502 aa		1.68	□□□□□ -2.14
VMA10	YHR039C-A	UBC5	P15732	148 aa		1.68	□□□□□ -2.14
VMA10	YHR039C-A	SNU13	P39990	126 aa	Known RBP	1.68	□□□□□ -2.14
VMA10	YHR039C-A	YER181C	P40097	107 aa		1.68	□□□□□ -2.14
VMA10	YHR039C-A	NSE4	P43124	402 aa		1.68	□□□□□ -2.14
VMA10	YHR039C-A	GPI2	P46961	280 aa		1.68	□□□□□ -2.14
VMA10	YHR039C-A	SBH1	P52870	82 aa		1.68	□□□□□ -2.14
VMA10	YHR039C-A	THG1	P53215	237 aa	Known RBP	1.68	□□□□□ -2.14
VMA10	YHR039C-A	YNL019C	P53975	284 aa		1.68	□□□□□ -2.14
VMA10	YHR039C-A	YLR042C	Q07990	161 aa		1.68	□□□□□ -2.14
VMA10	YHR039C-A	DUR1,2	P32528	1835 aa	Known RBP	1.68	□□□□□ -2.14
VMA10	YHR039C-A	SEC7	P11075	2009 aa	Known RBP	1.67	□□□□□ -2.14
VMA10	YHR039C-A	CAT8	P39113	1433 aa		1.67	□□□□□ -2.14
VMA10	YHR039C-A	MDM35	O60200	86 aa		1.67	□□□□□ -2.14
VMA10	YHR039C-A	ATP5	P09457	212 aa		1.67	□□□□□ -2.14
VMA10	YHR039C-A	YOL162W	P0CF19	215 aa		1.67	□□□□□ -2.14
VMA10	YHR039C-A	HYP2	P23301	157 aa	Known RBP	1.67	□□□□□ -2.14
VMA10	YHR039C-A	AHT1	P29589	182 aa		1.67	□□□□□ -2.14
VMA10	YHR039C-A	RRT1	P38192	103 aa		1.67	□□□□□ -2.14
VMA10	YHR039C-A	GNA1	P43577	159 aa	Predicted RBP	1.67	□□□□□ -2.14
VMA10	YHR039C-A	YHR007C-A	Q07074	71 aa		1.67	□□□□□ -2.14
VMA10	YHR039C-A	KTI11	Q3E840	82 aa		1.67	□□□□□ -2.14
VMA10	YHR039C-A	SSK2	P53599	1579 aa		1.67	□□□□□ -2.14
VMA10	YHR039C-A	SMC4	Q12267	1418 aa		1.66	□□□□□ -2.14
VMA10	YHR039C-A	DNA2	P38859	1522 aa		1.66	□□□□□ -2.14
VMA10	YHR039C-A	YCF1	P39109	1515 aa	Known RBP	1.66	□□□□□ -2.14
VMA10	YHR039C-A	COX8	P04039	78 aa		1.66	□□□□□ -2.14
VMA10	YHR039C-A	YHR130C	P38834	111 aa		1.66	□□□□□ -2.14
VMA10	YHR039C-A	RPB11	P38902	120 aa		1.66	□□□□□ -2.14
VMA10	YHR039C-A	YAR029W	P39549	74 aa		1.66	□□□□□ -2.14
VMA10	YHR039C-A	YJL218W	P40892	196 aa	Known RBP	1.66	□□□□□ -2.14
VMA10	YHR039C-A	YCL001W-A	P87012	153 aa		1.66	□□□□□ -2.14
VMA10	YHR039C-A	FIT2	Q08906	153 aa		1.66	□□□□□ -2.14
VMA10	YHR039C-A	DDP1	Q99321	188 aa	Known RBP	1.66	□□□□□ -2.14
VMA10	YHR039C-A	RPA190	P10964	1664 aa	Known RBP	1.66	□□□□□ -2.14
VMA10	YHR039C-A	ESP1	Q03018	1630 aa		1.66	□□□□□ -2.14
VMA10	YHR039C-A	SIN3	P22579	1536 aa		1.66	□□□□□ -2.14
VMA10	YHR039C-A	SWR1	Q05471	1514 aa		1.66	□□□□□ -2.14
VMA10	YHR039C-A	GEA1	P47102	1408 aa	Predicted RBP	1.66	□□□□□ -2.14
VMA10	YHR039C-A	UBR1	P19812	1950 aa		1.65	□□□□□ -2.14
VMA10	YHR039C-A	QCR8	P08525	94 aa		1.65	□□□□□ -2.15
VMA10	YHR039C-A	MRPL44	P19956	98 aa		1.65	□□□□□ -2.15
VMA10	YHR039C-A	MRS4	P23500	304 aa		1.65	□□□□□ -2.15
VMA10	YHR039C-A	SRB6	P32570	121 aa		1.65	□□□□□ -2.15
VMA10	YHR039C-A	YRA2	P36036	203 aa	Known RBP RIP-Chip data	1.65	□□□□□ -2.15	not detected
VMA10	YHR039C-A	EMC4	P53073	190 aa		1.65	□□□□□ -2.15
VMA10	YHR039C-A	YGL193C	P53097	103 aa		1.65	□□□□□ -2.15
VMA10	YHR039C-A	GEP7	P53171	287 aa		1.65	□□□□□ -2.15
VMA10	YHR039C-A	EST3	Q03096	181 aa		1.65	□□□□□ -2.15
VMA10	YHR039C-A	YMR252C	Q04814	134 aa		1.65	□□□□□ -2.15
VMA10	YHR039C-A	UPS1	Q05776	175 aa		1.65	□□□□□ -2.15
VMA10	YHR039C-A	UIP4	Q08926	304 aa		1.65	□□□□□ -2.15
VMA10	YHR039C-A	TY3B-I	Q7LHG5	1498 aa	Known RBP	1.64	□□□□□ -2.15
VMA10	YHR039C-A	RRP5	Q05022	1729 aa	Known RBP	1.64	□□□□□ -2.15
VMA10	YHR039C-A	SFT2	P38166	215 aa		1.64	□□□□□ -2.15
VMA10	YHR039C-A	FLX1	P40464	311 aa		1.64	□□□□□ -2.15
VMA10	YHR039C-A	GAT4	P40569	121 aa		1.64	□□□□□ -2.15
VMA10	YHR039C-A	ERV14	P53173	138 aa		1.64	□□□□□ -2.15
VMA10	YHR039C-A	YPL067C	Q02754	198 aa		1.64	□□□□□ -2.15
VMA10	YHR039C-A	RCE1	Q03530	315 aa		1.64	□□□□□ -2.15
VMA10	YHR039C-A	KEI1	Q06346	221 aa		1.64	□□□□□ -2.15
VMA10	YHR039C-A	ATG10	Q07879	167 aa		1.64	□□□□□ -2.15
VMA10	YHR039C-A	YOR015W	Q12169	119 aa		1.64	□□□□□ -2.15
VMA10	YHR039C-A	YOR097C	Q12274	175 aa	Predicted RBP	1.64	□□□□□ -2.15
VMA10	YHR039C-A	YOR381W-A	Q3E804	55 aa		1.64	□□□□□ -2.15
VMA10	YHR039C-A	DOP1	Q03921	1698 aa		1.64	□□□□□ -2.15
VMA10	YHR039C-A	MSB2	P32334	1306 aa		1.64	□□□□□ -2.15
VMA10	YHR039C-A	NUP159	P40477	1460 aa		1.63	□□□□□ -2.15
VMA10	YHR039C-A	UTP10	P42945	1769 aa	Known RBP	1.63	□□□□□ -2.15
VMA10	YHR039C-A	HAP3	P13434	144 aa		1.63	□□□□□ -2.15
VMA10	YHR039C-A	FPR1	P20081	114 aa	Known RBP	1.63	□□□□□ -2.15
VMA10	YHR039C-A	EMP24	P32803	203 aa	Known RBP	1.63	□□□□□ -2.15
VMA10	YHR039C-A	HPA3	P39979	161 aa		1.63	□□□□□ -2.15
VMA10	YHR039C-A	MPM1	P40364	252 aa		1.63	□□□□□ -2.15
VMA10	YHR039C-A	PHS1	P40857	217 aa		1.63	□□□□□ -2.15
VMA10	YHR039C-A	YGR164W	P53291	111 aa		1.63	□□□□□ -2.15
VMA10	YHR039C-A	YMR103C	Q04436	120 aa		1.63	□□□□□ -2.15
VMA10	YHR039C-A	SRB8	P25648	1427 aa		1.63	□□□□□ -2.15
VMA10	YHR039C-A	IRC20	Q06554	1556 aa		1.63	□□□□□ -2.15
VMA10	YHR039C-A	MMS22	Q06164	1454 aa		1.63	□□□□□ -2.15
VMA10	YHR039C-A	MYO1	P08964	1928 aa		1.62	□□□□□ -2.15
VMA10	YHR039C-A	YLR422W	Q06409	1932 aa		1.62	□□□□□ -2.15
VMA10	YHR039C-A	SPO14	P36126	1683 aa		1.62	□□□□□ -2.15
VMA10	YHR039C-A	RAD6	P06104	172 aa		1.62	□□□□□ -2.15
VMA10	YHR039C-A	HMRA1	P0CY11	126 aa		1.62	□□□□□ -2.15
VMA10	YHR039C-A	HSP12	P22943	109 aa	Known RBP	1.62	□□□□□ -2.15
VMA10	YHR039C-A	HTD2	P38790	280 aa	Known RBP	1.62	□□□□□ -2.15
VMA10	YHR039C-A	IPT1	P38954	527 aa		1.62	□□□□□ -2.15
VMA10	YHR039C-A	CCS1	P40202	249 aa	Known RBP	1.62	□□□□□ -2.15
VMA10	YHR039C-A	PIR1	Q03178	341 aa		1.62	□□□□□ -2.15
VMA10	YHR039C-A	RIM9	Q04734	239 aa		1.62	□□□□□ -2.15
VMA10	YHR039C-A	GPI11	Q06636	219 aa		1.62	□□□□□ -2.15

Retrieved 100 of 5,963 RNA–protein pairs in 11.1 ms