RNA–Protein interactions for RNA: YGR038C-B

YGR038C-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YGR038C-B, Length 5,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YGR038C-BYGR038C-B SFT2P38166 215 aa2.18□□□□□ -2.06
YGR038C-BYGR038C-B PRE5P40302 234 aaKnown RBP2.18□□□□□ -2.06
YGR038C-BYGR038C-B RIB4P50861 169 aaPredicted RBP2.18□□□□□ -2.06
YGR038C-BYGR038C-B DOC1P53068 250 aa2.18□□□□□ -2.06
YGR038C-BYGR038C-B ASM4Q05166 528 aa2.18□□□□□ -2.06
YGR038C-BYGR038C-B YPR096CO13587 100 aa2.17□□□□□ -2.06
YGR038C-BYGR038C-B YGL204CP53089 101 aa2.17□□□□□ -2.06
YGR038C-BYGR038C-B TY1B-JR2P47100 1755 aaKnown RBP2.17□□□□□ -2.06
YGR038C-BYGR038C-B TY1B-ER2Q03619 1755 aa2.17□□□□□ -2.06
YGR038C-BYGR038C-B TY1B-MR1Q04214 1755 aa2.17□□□□□ -2.06
YGR038C-BYGR038C-B TY1B-MR2Q04670 1755 aaKnown RBP2.17□□□□□ -2.06
YGR038C-BYGR038C-B TY1B-LR1Q12088 1755 aaKnown RBP2.17□□□□□ -2.06
YGR038C-BYGR038C-B TY1B-NL1Q12112 1755 aa2.17□□□□□ -2.06
YGR038C-BYGR038C-B TY1B-GR1Q12141 1755 aa2.17□□□□□ -2.06
YGR038C-BYGR038C-B TY1B-BLQ12490 1755 aa2.17□□□□□ -2.06
YGR038C-BYGR038C-B YLR415CO13578 112 aa2.17□□□□□ -2.06
YGR038C-BYGR038C-B POR1P04840 283 aaKnown RBP2.17□□□□□ -2.06
YGR038C-BYGR038C-B PGD1P40356 397 aa2.17□□□□□ -2.06
YGR038C-BYGR038C-B LST8P41318 303 aa2.17□□□□□ -2.06
YGR038C-BYGR038C-B FIP1P45976 327 aa2.17□□□□□ -2.06
YGR038C-BYGR038C-B UBC11P52492 156 aa2.17□□□□□ -2.06
YGR038C-BYGR038C-B SHH3Q04487 196 aa2.17□□□□□ -2.06
YGR038C-BYGR038C-B COA3Q3E7B2 85 aa2.17□□□□□ -2.06
YGR038C-BYGR038C-B ISD11Q6Q560 94 aa2.17□□□□□ -2.06
YGR038C-BYGR038C-B ADH1P00330 348 aaKnown RBP2.17□□□□□ -2.06
YGR038C-BYGR038C-B SPT14P32363 452 aa2.17□□□□□ -2.06
YGR038C-BYGR038C-B YKL070WP36087 169 aa2.17□□□□□ -2.06
YGR038C-BYGR038C-B YPS5P53057 165 aa2.17□□□□□ -2.06
YGR038C-BYGR038C-B STF2P16965 84 aa2.17□□□□□ -2.06
YGR038C-BYGR038C-B OST2P46964 130 aa2.17□□□□□ -2.06
YGR038C-BYGR038C-B YMR175W-AQ3E766 64 aa2.17□□□□□ -2.06
YGR038C-BYGR038C-B AQY2P0CD90 149 aa2.16□□□□□ -2.06
YGR038C-BYGR038C-B DFM1Q12743 341 aaKnown RBP2.16□□□□□ -2.06
YGR038C-BYGR038C-B YBL029C-AQ3E756 94 aa2.16□□□□□ -2.06
YGR038C-BYGR038C-B YOR008C-AQ3E7B9 74 aa2.16□□□□□ -2.06
YGR038C-BYGR038C-B Q0297Q9ZZV8 51 aa2.16□□□□□ -2.06
YGR038C-BYGR038C-B YER145C-AA0A023PYF4 145 aa2.16□□□□□ -2.06
YGR038C-BYGR038C-B HHF1P02309 103 aaKnown RBP2.16□□□□□ -2.06
YGR038C-BYGR038C-B TOA2P32774 122 aa2.16□□□□□ -2.06
YGR038C-BYGR038C-B VMA11P32842 164 aa2.16□□□□□ -2.06
YGR038C-BYGR038C-B KTI12P34253 313 aaKnown RBP2.16□□□□□ -2.06
YGR038C-BYGR038C-B WSC4P38739 605 aa2.16□□□□□ -2.06
YGR038C-BYGR038C-B YFL067WP43537 175 aa2.16□□□□□ -2.06
YGR038C-BYGR038C-B TAX4P47030 604 aa2.16□□□□□ -2.06
YGR038C-BYGR038C-B AIM34Q03673 198 aa2.16□□□□□ -2.06
YGR038C-BYGR038C-B RUB1Q03919 77 aa2.16□□□□□ -2.06
YGR038C-BYGR038C-B UTP10P42945 1769 aaKnown RBP2.16□□□□□ -2.06
YGR038C-BYGR038C-B PAU1P0CE88 120 aa2.16□□□□□ -2.06
YGR038C-BYGR038C-B PAU14P0CE89 120 aa2.16□□□□□ -2.06
YGR038C-BYGR038C-B PAU6P0CE90 120 aa2.16□□□□□ -2.06
YGR038C-BYGR038C-B PAU18P0CE91 120 aa2.16□□□□□ -2.06
YGR038C-BYGR038C-B PAU8P0CE92 120 aa2.16□□□□□ -2.06
YGR038C-BYGR038C-B PAU11P0CE93 120 aa2.16□□□□□ -2.06
YGR038C-BYGR038C-B YCR023CP25351 611 aa2.16□□□□□ -2.06
YGR038C-BYGR038C-B YCR041WP37265 110 aa2.16□□□□□ -2.06
YGR038C-BYGR038C-B PAU13P38725 120 aa2.16□□□□□ -2.06
YGR038C-BYGR038C-B ARC15P40518 154 aaRIP-Chip data2.16□□□□□ -2.06not detected
YGR038C-BYGR038C-B MSL1P40567 111 aaPredicted RBP2.16□□□□□ -2.06
YGR038C-BYGR038C-B YGL262WP53054 175 aa2.16□□□□□ -2.06
YGR038C-BYGR038C-B PAU4P53427 120 aa2.16□□□□□ -2.06
YGR038C-BYGR038C-B PAU10Q03050 120 aa2.16□□□□□ -2.06
YGR038C-BYGR038C-B PAU20Q08322 120 aa2.16□□□□□ -2.06
YGR038C-BYGR038C-B MSA1Q08471 629 aa2.16□□□□□ -2.06
YGR038C-BYGR038C-B FIT2Q08906 153 aa2.16□□□□□ -2.06
YGR038C-BYGR038C-B PAU9Q3E770 120 aa2.16□□□□□ -2.06
YGR038C-BYGR038C-B SRP14P38985 146 aa2.16□□□□□ -2.06
YGR038C-BYGR038C-B AIM19P40502 157 aa2.16□□□□□ -2.06
YGR038C-BYGR038C-B DGA1Q08650 418 aa2.16□□□□□ -2.06
YGR038C-BYGR038C-B YLR342W-AQ3E810 57 aa2.16□□□□□ -2.06
YGR038C-BYGR038C-B NHP6AP11632 93 aaKnown RBP2.15□□□□□ -2.06
YGR038C-BYGR038C-B YCR001WP25347 104 aa2.15□□□□□ -2.07
YGR038C-BYGR038C-B YPS1P32329 569 aa2.15□□□□□ -2.07
YGR038C-BYGR038C-B MIC12P38341 106 aa2.15□□□□□ -2.07
YGR038C-BYGR038C-B YKE4P40544 346 aa2.15□□□□□ -2.07
YGR038C-BYGR038C-B MPP6P53725 186 aaPredicted RBP2.15□□□□□ -2.07
YGR038C-BYGR038C-B CNL1Q06333 122 aa2.15□□□□□ -2.07
YGR038C-BYGR038C-B TIM22Q12328 207 aa2.15□□□□□ -2.07
YGR038C-BYGR038C-B VMA16P23968 213 aa2.15□□□□□ -2.07
YGR038C-BYGR038C-B YLL053CP0CD98 152 aa2.14□□□□□ -2.07
YGR038C-BYGR038C-B YGL010WP25338 174 aa2.14□□□□□ -2.07
YGR038C-BYGR038C-B LAC1P28496 418 aa2.14□□□□□ -2.07
YGR038C-BYGR038C-B ADH5P38113 351 aaKnown RBP2.14□□□□□ -2.07
YGR038C-BYGR038C-B YHR173CP38864 112 aa2.14□□□□□ -2.07
YGR038C-BYGR038C-B YNL217WP40152 326 aa2.14□□□□□ -2.07
YGR038C-BYGR038C-B YIL024CP40543 189 aa2.14□□□□□ -2.07
YGR038C-BYGR038C-B YFL012WP43580 148 aa2.14□□□□□ -2.07
YGR038C-BYGR038C-B YPL247CQ12523 523 aa2.14□□□□□ -2.07
YGR038C-BYGR038C-B YLR365WQ7LIF2 110 aa2.14□□□□□ -2.07
YGR038C-BYGR038C-B MRP10O75012 95 aa2.14□□□□□ -2.07
YGR038C-BYGR038C-B CTR2P38865 189 aa2.14□□□□□ -2.07
YGR038C-BYGR038C-B YER135CP40082 130 aa2.14□□□□□ -2.07
YGR038C-BYGR038C-B YJR111CP47148 283 aaKnown RBP2.14□□□□□ -2.07
YGR038C-BYGR038C-B YNL234WP53857 426 aa2.14□□□□□ -2.07
YGR038C-BYGR038C-B YNL042W-BQ3E7Z2 85 aa2.14□□□□□ -2.07
YGR038C-BYGR038C-B PTH1P38876 190 aaKnown RBP2.14□□□□□ -2.07
YGR038C-BYGR038C-B SKI6P46948 246 aaPredicted RBP2.14□□□□□ -2.07
YGR038C-BYGR038C-B HHO1P53551 258 aa2.14□□□□□ -2.07
YGR038C-BYGR038C-B YML054C-AQ3E809 52 aa2.14□□□□□ -2.07
YGR038C-BYGR038C-B YLR302CO13544 120 aa2.14□□□□□ -2.07
YGR038C-BYGR038C-B YCR043CP25361 127 aa2.14□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 98.3 ms