RNA–Protein interactions for RNA: YGR028W

MSP1, Transcript of Highly-conserved N-terminally anchored AAA-ATPase, yeastyeast

Gene MSP1, Length 1,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSP1YGR028W MRS1P07266 363 aa4.57□□□□□ -1.68
MSP1YGR028W RPL14AP36105 138 aaKnown RBP4.57□□□□□ -1.68
MSP1YGR028W YBR292CP38357 123 aa4.57□□□□□ -1.68
MSP1YGR028W RPL14BP38754 138 aaKnown RBP4.57□□□□□ -1.68
MSP1YGR028W VHS2P40463 436 aa4.57□□□□□ -1.68
MSP1YGR028W SRB7P47822 140 aa4.57□□□□□ -1.68
MSP1YGR028W SME1Q12330 94 aaPredicted RBP4.57□□□□□ -1.68
MSP1YGR028W EMC5P40540 141 aa4.56□□□□□ -1.68
MSP1YGR028W LOC1P43586 204 aaPredicted RBP4.56□□□□□ -1.68
MSP1YGR028W Q0255P03881 472 aa4.55□□□□□ -1.68
MSP1YGR028W RPL31BP0C2H9 113 aaKnown RBP4.55□□□□□ -1.68
MSP1YGR028W MRPL20P22354 195 aaPredicted RBP4.55□□□□□ -1.68
MSP1YGR028W MRPL4P36517 319 aa4.55□□□□□ -1.68
MSP1YGR028W RPL32P38061 130 aaKnown RBP4.55□□□□□ -1.68
MSP1YGR028W YIL163CP40448 117 aa4.55□□□□□ -1.68
MSP1YGR028W PLP1Q04004 230 aa4.55□□□□□ -1.68
MSP1YGR028W YPR195CQ06594 109 aa4.55□□□□□ -1.68
MSP1YGR028W YMR230W-AQ3E7B5 62 aa4.55□□□□□ -1.68
MSP1YGR028W YCR075W-AQ3E830 75 aa4.55□□□□□ -1.68
MSP1YGR028W RNA15P25299 296 aaPredicted RBP4.54□□□□□ -1.68
MSP1YGR028W HMX1P32339 317 aa4.54□□□□□ -1.68
MSP1YGR028W YHR173CP38864 112 aa4.54□□□□□ -1.68
MSP1YGR028W SPI1P40092 148 aa4.54□□□□□ -1.68
MSP1YGR028W GAT4P40569 121 aa4.54□□□□□ -1.68
MSP1YGR028W PPT2Q12036 173 aa4.54□□□□□ -1.68
MSP1YGR028W VAR1P02381 398 aa4.53□□□□□ -1.68
MSP1YGR028W POG1P40473 351 aa4.53□□□□□ -1.68
MSP1YGR028W SMD3P43321 101 aaKnown RBP4.53□□□□□ -1.68
MSP1YGR028W GIS2P53849 153 aaKnown RBP RIP-Chip data4.53□□□□□ -1.68not detected
MSP1YGR028W DAD4P69851 72 aa4.53□□□□□ -1.68
MSP1YGR028W YCL001W-AP87012 153 aa4.53□□□□□ -1.68
MSP1YGR028W CPT1P17898 393 aa4.52□□□□□ -1.69
MSP1YGR028W ACP1P32463 125 aa4.52□□□□□ -1.69
MSP1YGR028W YBR090CP38253 122 aa4.52□□□□□ -1.69
MSP1YGR028W YPS5P53057 165 aa4.52□□□□□ -1.69
MSP1YGR028W PAU4P53427 120 aa4.52□□□□□ -1.69
MSP1YGR028W COX19Q3E731 98 aa4.52□□□□□ -1.69
MSP1YGR028W YBR298C-AQ8TGK4 73 aa4.52□□□□□ -1.69
MSP1YGR028W RPL16BP26785 198 aaKnown RBP4.51□□□□□ -1.69
MSP1YGR028W RRT13P40042 185 aa4.51□□□□□ -1.69
MSP1YGR028W SNO1Q03144 224 aa4.51□□□□□ -1.69
MSP1YGR028W YMR253CQ04835 414 aa4.51□□□□□ -1.69
MSP1YGR028W DAD1Q12248 94 aa4.51□□□□□ -1.69
MSP1YGR028W AME1P38313 324 aa4.5□□□□□ -1.69
MSP1YGR028W SPC25P40014 221 aa4.5□□□□□ -1.69
MSP1YGR028W KEG1P43614 200 aa4.5□□□□□ -1.69
MSP1YGR028W PAU1P0CE88 120 aa4.49□□□□□ -1.69
MSP1YGR028W PAU14P0CE89 120 aa4.49□□□□□ -1.69
MSP1YGR028W PAU6P0CE90 120 aa4.49□□□□□ -1.69
MSP1YGR028W PAU18P0CE91 120 aa4.49□□□□□ -1.69
MSP1YGR028W PAU8P0CE92 120 aa4.49□□□□□ -1.69
MSP1YGR028W PAU11P0CE93 120 aa4.49□□□□□ -1.69
MSP1YGR028W MSK1P32048 576 aa4.49□□□□□ -1.69
MSP1YGR028W AGA1P32323 725 aa4.49□□□□□ -1.69
MSP1YGR028W RIB5P38145 238 aa4.49□□□□□ -1.69
MSP1YGR028W PAU13P38725 120 aa4.49□□□□□ -1.69
MSP1YGR028W PAU10Q03050 120 aa4.49□□□□□ -1.69
MSP1YGR028W PAU20Q08322 120 aa4.49□□□□□ -1.69
MSP1YGR028W PAU9Q3E770 120 aa4.49□□□□□ -1.69
MSP1YGR028W YLR342W-AQ3E810 57 aa4.49□□□□□ -1.69
MSP1YGR028W FZF1P32805 299 aa4.48□□□□□ -1.69
MSP1YGR028W KRE9P39005 276 aa4.48□□□□□ -1.69
MSP1YGR028W IRC22P40006 225 aa4.48□□□□□ -1.69
MSP1YGR028W YNL217WP40152 326 aa4.48□□□□□ -1.69
MSP1YGR028W HIT1P46973 164 aa4.48□□□□□ -1.69
MSP1YGR028W YBR200W-AQ3E755 54 aa4.48□□□□□ -1.69
MSP1YGR028W YCR007CP25354 239 aa4.47□□□□□ -1.69
MSP1YGR028W PGD1P40356 397 aa4.47□□□□□ -1.69
MSP1YGR028W YDR366CP87287 132 aa4.47□□□□□ -1.69
MSP1YGR028W RPS22AP0C0W1 130 aaKnown RBP4.46□□□□□ -1.7
MSP1YGR028W MRPL28P36527 147 aa4.46□□□□□ -1.7
MSP1YGR028W SHG1P38337 142 aa4.46□□□□□ -1.7
MSP1YGR028W YFR045WP43617 309 aa4.46□□□□□ -1.7
MSP1YGR028W SNN1P48232 102 aa4.46□□□□□ -1.7
MSP1YGR028W BRP1P53194 125 aa4.46□□□□□ -1.7
MSP1YGR028W YGR017WP53210 297 aa4.46□□□□□ -1.7
MSP1YGR028W COA4Q05809 96 aa4.46□□□□□ -1.7
MSP1YGR028W YGR240C-AQ3E786 66 aa4.46□□□□□ -1.7
MSP1YGR028W ANB1P19211 157 aa4.45□□□□□ -1.7
MSP1YGR028W CYB5P40312 120 aa4.45□□□□□ -1.7
MSP1YGR028W DIA1P54005 336 aa4.45□□□□□ -1.7
MSP1YGR028W AIM34Q03673 198 aa4.45□□□□□ -1.7
MSP1YGR028W PBA1Q05778 276 aa4.45□□□□□ -1.7
MSP1YGR028W NAT3Q06504 195 aa4.45□□□□□ -1.7
MSP1YGR028W YLR042CQ07990 161 aa4.45□□□□□ -1.7
MSP1YGR028W YOR105WQ08504 108 aa4.45□□□□□ -1.7
MSP1YGR028W TIM22Q12328 207 aa4.45□□□□□ -1.7
MSP1YGR028W YNL200CP40165 246 aaKnown RBP4.44□□□□□ -1.7
MSP1YGR028W SPC1P46965 94 aa4.44□□□□□ -1.7
MSP1YGR028W YGL185CP53100 379 aa4.44□□□□□ -1.7
MSP1YGR028W LCL2Q08045 131 aa4.44□□□□□ -1.7
MSP1YGR028W FMP16Q12497 93 aa4.44□□□□□ -1.7
MSP1YGR028W POF1P25576 258 aa4.43□□□□□ -1.7
MSP1YGR028W YCH1P42937 148 aa4.43□□□□□ -1.7
MSP1YGR028W MGA1P53050 456 aa4.43□□□□□ -1.7
MSP1YGR028W ATP19P81451 68 aa4.43□□□□□ -1.7
MSP1YGR028W DXO1Q06349 442 aa4.43□□□□□ -1.7
MSP1YGR028W DGA1Q08650 418 aa4.43□□□□□ -1.7
MSP1YGR028W UTP23Q12339 254 aaKnown RBP4.43□□□□□ -1.7
MSP1YGR028W YLL066W-BQ8TGJ7 56 aa4.43□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 22 ms