RNA–Protein interactions for RNA: YGL172W

NUP49, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP49, Length 1,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP49YGL172W ALG13P53178 202 aa5.16□□□□□ -1.58
NUP49YGL172W MED7Q08278 222 aa5.16□□□□□ -1.58
NUP49YGL172W YPR145C-AQ2V2P0 78 aa5.16□□□□□ -1.58
NUP49YGL172W SEC59P20048 519 aa5.15□□□□□ -1.58
NUP49YGL172W PHS1P40857 217 aa5.15□□□□□ -1.58
NUP49YGL172W BNS1P50084 137 aa5.15□□□□□ -1.58
NUP49YGL172W MIC26P50087 233 aa5.15□□□□□ -1.58
NUP49YGL172W YDR274CP87283 123 aa5.15□□□□□ -1.58
NUP49YGL172W MSC3Q05812 728 aa5.15□□□□□ -1.58
NUP49YGL172W MRPL20P22354 195 aaPredicted RBP5.14□□□□□ -1.59
NUP49YGL172W UIP3P39547 235 aa5.14□□□□□ -1.59
NUP49YGL172W YMR141CP40211 102 aa5.14□□□□□ -1.59
NUP49YGL172W PRE5P40302 234 aaKnown RBP5.14□□□□□ -1.59
NUP49YGL172W POG1P40473 351 aa5.14□□□□□ -1.59
NUP49YGL172W DAD3P69850 94 aa5.14□□□□□ -1.59
NUP49YGL172W NAT3Q06504 195 aa5.14□□□□□ -1.59
NUP49YGL172W YNL146C-AQ3E7Z1 64 aa5.14□□□□□ -1.59
NUP49YGL172W RPL31BP0C2H9 113 aaKnown RBP5.14□□□□□ -1.59
NUP49YGL172W LAC1P28496 418 aa5.14□□□□□ -1.59
NUP49YGL172W SDH4P37298 181 aa5.14□□□□□ -1.59
NUP49YGL172W YPL162CQ12042 273 aa5.14□□□□□ -1.59
NUP49YGL172W YBR090CP38253 122 aa5.13□□□□□ -1.59
NUP49YGL172W YER135CP40082 130 aa5.13□□□□□ -1.59
NUP49YGL172W DAD4P69851 72 aa5.13□□□□□ -1.59
NUP49YGL172W YMR244WQ04018 355 aa5.13□□□□□ -1.59
NUP49YGL172W YLR281CQ05863 155 aa5.13□□□□□ -1.59
NUP49YGL172W CNB1P25296 175 aa5.12□□□□□ -1.59
NUP49YGL172W NTF2P33331 125 aaKnown RBP5.12□□□□□ -1.59
NUP49YGL172W DAD1Q12248 94 aa5.12□□□□□ -1.59
NUP49YGL172W SMT3Q12306 101 aaKnown RBP5.12□□□□□ -1.59
NUP49YGL172W MDN1Q12019 4910 aaKnown RBP5.11□□□□□ -1.59
NUP49YGL172W FMP49A0A023PZB3 126 aa5.11□□□□□ -1.59
NUP49YGL172W ADH3P07246 375 aaKnown RBP5.11□□□□□ -1.59
NUP49YGL172W MRPL4P36517 319 aa5.11□□□□□ -1.59
NUP49YGL172W MRPS9P38120 278 aa5.11□□□□□ -1.59
NUP49YGL172W AME1P38313 324 aa5.11□□□□□ -1.59
NUP49YGL172W MIG3P39943 394 aa5.11□□□□□ -1.59
NUP49YGL172W YGR149WP48236 432 aa5.11□□□□□ -1.59
NUP49YGL172W TIM21P53220 239 aa5.11□□□□□ -1.59
NUP49YGL172W ATP19P81451 68 aa5.11□□□□□ -1.59
NUP49YGL172W MRPS8Q03799 155 aa5.11□□□□□ -1.59
NUP49YGL172W DCN1Q12395 269 aa5.11□□□□□ -1.59
NUP49YGL172W YIL002W-AQ3E7Z5 69 aa5.11□□□□□ -1.59
NUP49YGL172W YHR022CP38763 256 aa5.1□□□□□ -1.59
NUP49YGL172W YOR105WQ08504 108 aa5.1□□□□□ -1.59
NUP49YGL172W YPR063CQ12160 140 aa5.1□□□□□ -1.59
NUP49YGL172W YOL085CQ99345 113 aa5.1□□□□□ -1.59
NUP49YGL172W POF1P25576 258 aa5.09□□□□□ -1.59
NUP49YGL172W SRP21P32342 167 aa5.09□□□□□ -1.59
NUP49YGL172W FZF1P32805 299 aa5.09□□□□□ -1.59
NUP49YGL172W ATG8P38182 117 aaRIP-Chip data5.09□□□□□ -1.59not detected
NUP49YGL172W SRP14P38985 146 aa5.09□□□□□ -1.59
NUP49YGL172W VMA21P41806 77 aa5.09□□□□□ -1.59
NUP49YGL172W CCW12Q12127 133 aa5.09□□□□□ -1.59
NUP49YGL172W YCL001W-BQ96VH2 84 aa5.09□□□□□ -1.59
NUP49YGL172W CPT1P17898 393 aa5.08□□□□□ -1.6
NUP49YGL172W HSP10P38910 106 aa5.08□□□□□ -1.6
NUP49YGL172W YFR045WP43617 309 aa5.08□□□□□ -1.6
NUP49YGL172W YGL185CP53100 379 aa5.08□□□□□ -1.6
NUP49YGL172W TIR1P10863 254 aa5.07□□□□□ -1.6
NUP49YGL172W YGL010WP25338 174 aa5.07□□□□□ -1.6
NUP49YGL172W NRG2P38082 220 aa5.07□□□□□ -1.6
NUP49YGL172W SPI1P40092 148 aa5.07□□□□□ -1.6
NUP49YGL172W PGD1P40356 397 aa5.07□□□□□ -1.6
NUP49YGL172W COX12Q01519 83 aa5.07□□□□□ -1.6
NUP49YGL172W YLR342W-AQ3E810 57 aa5.07□□□□□ -1.6
NUP49YGL172W QRI5P32344 111 aa5.06□□□□□ -1.6
NUP49YGL172W YFR035CP43608 114 aa5.06□□□□□ -1.6
NUP49YGL172W APS2Q00381 147 aa5.06□□□□□ -1.6
NUP49YGL172W YLR118CQ12354 227 aa5.06□□□□□ -1.6
NUP49YGL172W NHP6AP11632 93 aaKnown RBP5.06□□□□□ -1.6
NUP49YGL172W CUP2P15315 225 aa5.06□□□□□ -1.6
NUP49YGL172W AUA1P32450 94 aa5.06□□□□□ -1.6
NUP49YGL172W YRA2P36036 203 aaKnown RBP RIP-Chip data5.06□□□□□ -1.6not detected
NUP49YGL172W DAN1P47178 298 aa5.06□□□□□ -1.6
NUP49YGL172W MGA1P53050 456 aa5.06□□□□□ -1.6
NUP49YGL172W GIM5Q04493 163 aa5.06□□□□□ -1.6
NUP49YGL172W UTP23Q12339 254 aaKnown RBP5.06□□□□□ -1.6
NUP49YGL172W RPL2AP0CX45 254 aaKnown RBP5.05□□□□□ -1.6
NUP49YGL172W RPL2BP0CX46 254 aaKnown RBP5.05□□□□□ -1.6
NUP49YGL172W RPS11AP0CX47 156 aaKnown RBP5.05□□□□□ -1.6
NUP49YGL172W RPS11BP0CX48 156 aaKnown RBP5.05□□□□□ -1.6
NUP49YGL172W MRPL31P14063 131 aaPredicted RBP5.05□□□□□ -1.6
NUP49YGL172W RPL32P38061 130 aaKnown RBP5.05□□□□□ -1.6
NUP49YGL172W PAU15P40585 124 aa5.05□□□□□ -1.6
NUP49YGL172W YOP1Q12402 180 aa5.05□□□□□ -1.6
NUP49YGL172W RPB11P38902 120 aa5.04□□□□□ -1.6
NUP49YGL172W NSE4P43124 402 aa5.04□□□□□ -1.6
NUP49YGL172W KEG1P43614 200 aa5.04□□□□□ -1.6
NUP49YGL172W MOG1P47123 218 aa5.04□□□□□ -1.6
NUP49YGL172W UPS3Q04006 179 aa5.04□□□□□ -1.6
NUP49YGL172W CSM4Q08955 156 aa5.04□□□□□ -1.6
NUP49YGL172W TIM22Q12328 207 aa5.04□□□□□ -1.6
NUP49YGL172W YNR034W-AQ3E841 98 aa5.04□□□□□ -1.6
NUP49YGL172W VAR1P02381 398 aa5.03□□□□□ -1.6
NUP49YGL172W Q0255P03881 472 aa5.03□□□□□ -1.6
NUP49YGL172W PAM17P36147 197 aa5.03□□□□□ -1.6
NUP49YGL172W MIX23P38162 196 aa5.03□□□□□ -1.6
NUP49YGL172W YGR017WP53210 297 aa5.03□□□□□ -1.6
NUP49YGL172W DIA1P54005 336 aa5.03□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 48.1 ms