RNA–Protein interactions for RNA: YGL090W

LIF1, Transcript of Component of the DNA ligase IV complex, yeastyeast

Gene LIF1, Length 1,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LIF1YGL090W CUP9P41817 306 aa2.55□□□□□ -2
LIF1YGL090W YGR026WP53217 278 aa2.55□□□□□ -2
LIF1YGL090W ATP19P81451 68 aa2.55□□□□□ -2
LIF1YGL090W YOL029CQ08187 201 aa2.55□□□□□ -2
LIF1YGL090W YER078W-AQ3E7A2 54 aa2.55□□□□□ -2
LIF1YGL090W TY3B-IQ7LHG5 1498 aaKnown RBP2.55□□□□□ -2
LIF1YGL090W YPR117WQ06116 2489 aa2.54□□□□□ -2
LIF1YGL090W SRB8P25648 1427 aa2.54□□□□□ -2
LIF1YGL090W COX10P21592 462 aa2.54□□□□□ -2
LIF1YGL090W YBL059WP34224 193 aa2.54□□□□□ -2
LIF1YGL090W RRT1P38192 103 aa2.54□□□□□ -2
LIF1YGL090W YAL064WP39711 94 aa2.54□□□□□ -2
LIF1YGL090W CCS1P40202 249 aaKnown RBP2.54□□□□□ -2
LIF1YGL090W ECO1P43605 281 aa2.54□□□□□ -2
LIF1YGL090W THG1P53215 237 aaKnown RBP2.54□□□□□ -2
LIF1YGL090W CAX4P53223 239 aa2.54□□□□□ -2
LIF1YGL090W SMD1Q02260 146 aaPredicted RBP2.54□□□□□ -2
LIF1YGL090W FIT1Q04433 528 aa2.54□□□□□ -2
LIF1YGL090W SHH3Q04487 196 aa2.54□□□□□ -2
LIF1YGL090W FCF1Q05498 189 aaPredicted RBP2.54□□□□□ -2
LIF1YGL090W SWC7Q06707 132 aa2.54□□□□□ -2
LIF1YGL090W POR1P04840 283 aaKnown RBP2.53□□□□□ -2
LIF1YGL090W SRB6P32570 121 aa2.53□□□□□ -2
LIF1YGL090W YET1P35723 206 aa2.53□□□□□ -2
LIF1YGL090W MIG3P39943 394 aa2.53□□□□□ -2
LIF1YGL090W RRT13P40042 185 aa2.53□□□□□ -2
LIF1YGL090W GTT1P40582 234 aa2.53□□□□□ -2
LIF1YGL090W SAY1P53324 424 aa2.53□□□□□ -2
LIF1YGL090W YDR274CP87283 123 aa2.53□□□□□ -2
LIF1YGL090W PPT2Q12036 173 aa2.53□□□□□ -2
LIF1YGL090W YOR381W-AQ3E804 55 aa2.53□□□□□ -2
LIF1YGL090W YOR376W-AQ3E805 51 aa2.53□□□□□ -2
LIF1YGL090W RRP5Q05022 1729 aaKnown RBP2.53□□□□□ -2
LIF1YGL090W ROM2P51862 1356 aaKnown RBP2.52□□□□□ -2.01
LIF1YGL090W NUM1Q00402 2748 aa2.52□□□□□ -2.01
LIF1YGL090W YOL162WP0CF19 215 aa2.52□□□□□ -2.01
LIF1YGL090W HAP3P13434 144 aa2.52□□□□□ -2.01
LIF1YGL090W RPB9P27999 122 aa2.52□□□□□ -2.01
LIF1YGL090W CLB6P32943 380 aa2.52□□□□□ -2.01
LIF1YGL090W ECM31P38122 312 aa2.52□□□□□ -2.01
LIF1YGL090W SWD3P38123 315 aa2.52□□□□□ -2.01
LIF1YGL090W ECM34P38728 170 aa2.52□□□□□ -2.01
LIF1YGL090W IPT1P38954 527 aa2.52□□□□□ -2.01
LIF1YGL090W TVP23P38962 199 aa2.52□□□□□ -2.01
LIF1YGL090W RPL13BP40212 199 aaKnown RBP2.52□□□□□ -2.01
LIF1YGL090W YCL001W-AP87012 153 aa2.52□□□□□ -2.01
LIF1YGL090W RAF1Q06891 181 aa2.52□□□□□ -2.01
LIF1YGL090W CSI2Q08054 341 aa2.52□□□□□ -2.01
LIF1YGL090W RAD28Q12021 506 aa2.52□□□□□ -2.01
LIF1YGL090W YDR029WQ12111 104 aa2.52□□□□□ -2.01
LIF1YGL090W YPR063CQ12160 140 aa2.52□□□□□ -2.01
LIF1YGL090W COA6Q3E846 104 aa2.52□□□□□ -2.01
LIF1YGL090W YAL067W-AQ8TGK6 75 aa2.52□□□□□ -2.01
LIF1YGL090W ADE6P38972 1358 aaKnown RBP2.51□□□□□ -2.01
LIF1YGL090W MAK31P23059 88 aa2.51□□□□□ -2.01
LIF1YGL090W MRPL11P36521 249 aaPredicted RBP2.51□□□□□ -2.01
LIF1YGL090W YHL042WP38729 150 aa2.51□□□□□ -2.01
LIF1YGL090W CTR2P38865 189 aa2.51□□□□□ -2.01
LIF1YGL090W SNF11P38956 169 aa2.51□□□□□ -2.01
LIF1YGL090W YNL217WP40152 326 aa2.51□□□□□ -2.01
LIF1YGL090W ERG25P53045 309 aa2.51□□□□□ -2.01
LIF1YGL090W TOR1P35169 2470 aa2.51□□□□□ -2.01
LIF1YGL090W MRPL44P19956 98 aa2.5□□□□□ -2.01
LIF1YGL090W FMT1P32785 401 aa2.5□□□□□ -2.01
LIF1YGL090W HPA3P39979 161 aa2.5□□□□□ -2.01
LIF1YGL090W MSL1P40567 111 aaPredicted RBP2.5□□□□□ -2.01
LIF1YGL090W DOC1P53068 250 aa2.5□□□□□ -2.01
LIF1YGL090W ERV14P53173 138 aa2.5□□□□□ -2.01
LIF1YGL090W MPC3P53311 146 aa2.5□□□□□ -2.01
LIF1YGL090W HAL1Q01766 294 aa2.5□□□□□ -2.01
LIF1YGL090W GPI19Q04082 140 aa2.5□□□□□ -2.01
LIF1YGL090W FYV12Q08559 129 aa2.5□□□□□ -2.01
LIF1YGL090W FIT3Q08907 204 aa2.5□□□□□ -2.01
LIF1YGL090W YOL085CQ99345 113 aa2.5□□□□□ -2.01
LIF1YGL090W ECM12O13529 151 aa2.49□□□□□ -2.01
LIF1YGL090W COX5BP00425 151 aa2.49□□□□□ -2.01
LIF1YGL090W HMRA1P0CY11 126 aa2.49□□□□□ -2.01
LIF1YGL090W INO4P13902 151 aa2.49□□□□□ -2.01
LIF1YGL090W YKL044WP36092 106 aa2.49□□□□□ -2.01
LIF1YGL090W PAM17P36147 197 aa2.49□□□□□ -2.01
LIF1YGL090W EMC5P40540 141 aa2.49□□□□□ -2.01
LIF1YGL090W YPL067CQ02754 198 aa2.49□□□□□ -2.01
LIF1YGL090W MZM1Q03429 123 aaPredicted RBP2.49□□□□□ -2.01
LIF1YGL090W YOR015WQ12169 119 aa2.49□□□□□ -2.01
LIF1YGL090W YBR298C-AQ8TGK4 73 aa2.49□□□□□ -2.01
LIF1YGL090W URB1P34241 1764 aaKnown RBP2.49□□□□□ -2.01
LIF1YGL090W LYS2P07702 1392 aa2.49□□□□□ -2.01
LIF1YGL090W COX4P04037 155 aa2.48□□□□□ -2.01
LIF1YGL090W SCM4P32564 187 aa2.48□□□□□ -2.01
LIF1YGL090W FZF1P32805 299 aa2.48□□□□□ -2.01
LIF1YGL090W MRPL27P36526 146 aaPredicted RBP2.48□□□□□ -2.01
LIF1YGL090W PHO88P38264 188 aaPredicted RBP2.48□□□□□ -2.01
LIF1YGL090W YFR035CP43608 114 aa2.48□□□□□ -2.01
LIF1YGL090W RIM9Q04734 239 aa2.48□□□□□ -2.01
LIF1YGL090W GPI11Q06636 219 aa2.48□□□□□ -2.01
LIF1YGL090W YOR385WQ08909 290 aa2.48□□□□□ -2.01
LIF1YGL090W FEX1Q08913 375 aa2.48□□□□□ -2.01
LIF1YGL090W FEX2Q08991 375 aa2.48□□□□□ -2.01
LIF1YGL090W YLR365WQ7LIF2 110 aa2.48□□□□□ -2.01
LIF1YGL090W ATG40Q99325 256 aa2.48□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 73.4 ms