RNA–Protein interactions for RNA: YDR407C

TRS120, Transcript of Component of transport protein particle (TRAPP) complex II, yeastyeast

Gene TRS120, Length 3,870 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS120YDR407C YDR114CQ04597 100 aa2.83□□□□□ -1.96
TRS120YDR407C YDL129WQ07555 291 aa2.83□□□□□ -1.96
TRS120YDR407C SMT3Q12306 101 aaKnown RBP2.83□□□□□ -1.96
TRS120YDR407C COA3Q3E7B2 85 aa2.83□□□□□ -1.96
TRS120YDR407C YDL022C-AP0C5L6 82 aa2.83□□□□□ -1.96
TRS120YDR407C FEN2P25621 512 aaKnown RBP2.83□□□□□ -1.96
TRS120YDR407C YPR014CQ6B0W2 109 aa2.83□□□□□ -1.96
TRS120YDR407C RPB10P22139 70 aa2.82□□□□□ -1.96
TRS120YDR407C YER076CP40049 302 aa2.82□□□□□ -1.96
TRS120YDR407C WTM2Q12206 467 aa2.82□□□□□ -1.96
TRS120YDR407C MRPL20P22354 195 aaPredicted RBP2.82□□□□□ -1.96
TRS120YDR407C WWM1P43582 211 aaKnown RBP2.82□□□□□ -1.96
TRS120YDR407C YPL077CQ02831 240 aa2.82□□□□□ -1.96
TRS120YDR407C RXT3Q07458 294 aa2.82□□□□□ -1.96
TRS120YDR407C AQY1P0CD91 305 aa2.82□□□□□ -1.96
TRS120YDR407C YFR045WP43617 309 aa2.82□□□□□ -1.96
TRS120YDR407C MRPS12P53732 153 aa2.82□□□□□ -1.96
TRS120YDR407C YNR077CP53758 84 aa2.82□□□□□ -1.96
TRS120YDR407C GPI19Q04082 140 aa2.82□□□□□ -1.96
TRS120YDR407C HFA1P32874 2273 aa2.82□□□□□ -1.96
TRS120YDR407C VAR1P02381 398 aa2.81□□□□□ -1.96
TRS120YDR407C RPL39P04650 51 aa2.81□□□□□ -1.96
TRS120YDR407C ZRT1P32804 376 aa2.81□□□□□ -1.96
TRS120YDR407C YKR041WP36134 250 aa2.81□□□□□ -1.96
TRS120YDR407C CSM4Q08955 156 aa2.81□□□□□ -1.96
TRS120YDR407C YPR053CQ6Q5F3 151 aa2.81□□□□□ -1.96
TRS120YDR407C BEM2P39960 2167 aaKnown RBP2.81□□□□□ -1.96
TRS120YDR407C PAU7P39545 55 aa2.81□□□□□ -1.96
TRS120YDR407C RPL27BP0C2H7 136 aaKnown RBP2.81□□□□□ -1.96
TRS120YDR407C CUP2P15315 225 aa2.81□□□□□ -1.96
TRS120YDR407C DPP1Q05521 289 aa2.81□□□□□ -1.96
TRS120YDR407C INO2P26798 304 aa2.8□□□□□ -1.96
TRS120YDR407C YKR070WP36151 352 aaKnown RBP2.8□□□□□ -1.96
TRS120YDR407C YMR141CP40211 102 aa2.8□□□□□ -1.96
TRS120YDR407C SGN1P40561 250 aaKnown RBP RIP-Chip data2.8□□□□□ -1.96not detected
TRS120YDR407C POP3P53833 195 aaPredicted RBP2.8□□□□□ -1.96
TRS120YDR407C YMR317WQ04893 1140 aa2.8□□□□□ -1.96
TRS120YDR407C IES6P32617 166 aa2.8□□□□□ -1.96
TRS120YDR407C SDS23P53172 527 aa2.8□□□□□ -1.96
TRS120YDR407C MSA1Q08471 629 aa2.8□□□□□ -1.96
TRS120YDR407C RPL23AP0CX41 137 aaKnown RBP2.8□□□□□ -1.96
TRS120YDR407C RPL23BP0CX42 137 aaKnown RBP2.8□□□□□ -1.96
TRS120YDR407C HSP12P22943 109 aaKnown RBP2.8□□□□□ -1.96
TRS120YDR407C AGA1P32323 725 aa2.8□□□□□ -1.96
TRS120YDR407C ISU2Q12056 156 aa2.8□□□□□ -1.96
TRS120YDR407C YIL102C-AQ2V2P5 75 aa2.8□□□□□ -1.96
TRS120YDR407C BLM10P43583 2143 aa2.8□□□□□ -1.96
TRS120YDR407C COX10P21592 462 aa2.79□□□□□ -1.96
TRS120YDR407C ECM14P38836 430 aa2.79□□□□□ -1.96
TRS120YDR407C BNA1P47096 177 aa2.79□□□□□ -1.96
TRS120YDR407C HAP3P13434 144 aa2.79□□□□□ -1.96
TRS120YDR407C PHD1P36093 366 aa2.79□□□□□ -1.96
TRS120YDR407C MRPL11P36521 249 aaPredicted RBP2.79□□□□□ -1.96
TRS120YDR407C YPR013CQ12145 317 aa2.79□□□□□ -1.96
TRS120YDR407C RPL27AP0C2H6 136 aaKnown RBP2.79□□□□□ -1.96
TRS120YDR407C PRE1P22141 198 aaKnown RBP2.79□□□□□ -1.96
TRS120YDR407C YKL070WP36087 169 aa2.79□□□□□ -1.96
TRS120YDR407C SNF11P38956 169 aa2.79□□□□□ -1.96
TRS120YDR407C COX16P47081 118 aa2.79□□□□□ -1.96
TRS120YDR407C GEP3Q08622 556 aa2.79□□□□□ -1.96
TRS120YDR407C YER145C-AA0A023PYF4 145 aa2.78□□□□□ -1.96
TRS120YDR407C DUT1P33317 147 aa2.78□□□□□ -1.96
TRS120YDR407C WSC3Q12215 556 aa2.78□□□□□ -1.96
TRS120YDR407C CYC7P00045 113 aa2.78□□□□□ -1.96
TRS120YDR407C ATG39Q06159 398 aa2.78□□□□□ -1.96
TRS120YDR407C PRY2P36110 329 aa2.78□□□□□ -1.96
TRS120YDR407C THG1P53215 237 aaKnown RBP2.78□□□□□ -1.96
TRS120YDR407C NUP53Q03790 475 aa2.78□□□□□ -1.96
TRS120YDR407C RPS2P25443 254 aaKnown RBP2.77□□□□□ -1.97
TRS120YDR407C TDA4P47153 279 aa2.77□□□□□ -1.97
TRS120YDR407C YOL160WQ08321 113 aa2.77□□□□□ -1.97
TRS120YDR407C PRM3Q08931 133 aa2.77□□□□□ -1.97
TRS120YDR407C MBB1P39534 108 aa2.77□□□□□ -1.97
TRS120YDR407C YIP1P53039 248 aa2.77□□□□□ -1.97
TRS120YDR407C MIA40P36046 403 aa2.76□□□□□ -1.97
TRS120YDR407C NOP16P40007 231 aaKnown RBP2.76□□□□□ -1.97
TRS120YDR407C CRZ1P53968 678 aa2.76□□□□□ -1.97
TRS120YDR407C CTR2P38865 189 aa2.76□□□□□ -1.97
TRS120YDR407C NCA3P46955 337 aa2.76□□□□□ -1.97
TRS120YDR407C DGA1Q08650 418 aa2.76□□□□□ -1.97
TRS120YDR407C YNL146C-AQ3E7Z1 64 aa2.76□□□□□ -1.97
TRS120YDR407C MSL1P40567 111 aaPredicted RBP2.76□□□□□ -1.97
TRS120YDR407C YDR366CP87287 132 aa2.76□□□□□ -1.97
TRS120YDR407C YLR363W-AQ3E747 85 aa2.76□□□□□ -1.97
TRS120YDR407C YHR022CP38763 256 aa2.75□□□□□ -1.97
TRS120YDR407C MRPL49P40858 161 aaPredicted RBP2.75□□□□□ -1.97
TRS120YDR407C ELF1P36053 145 aa2.75□□□□□ -1.97
TRS120YDR407C YIR020CP40575 100 aa2.75□□□□□ -1.97
TRS120YDR407C YJR146WP47174 117 aa2.75□□□□□ -1.97
TRS120YDR407C YLR194CQ05777 254 aa2.75□□□□□ -1.97
TRS120YDR407C YCL048W-AQ2V2Q2 79 aa2.75□□□□□ -1.97
TRS120YDR407C RPS8AP0CX39 200 aaKnown RBP2.75□□□□□ -1.97
TRS120YDR407C RPS8BP0CX40 200 aaKnown RBP2.75□□□□□ -1.97
TRS120YDR407C DAD2P36162 133 aa2.75□□□□□ -1.97
TRS120YDR407C POP7P38291 140 aa2.75□□□□□ -1.97
TRS120YDR407C SBH2P52871 88 aa2.75□□□□□ -1.97
TRS120YDR407C RDL1Q12305 139 aaKnown RBP2.75□□□□□ -1.97
TRS120YDR407C YBR200W-AQ3E755 54 aa2.75□□□□□ -1.97
TRS120YDR407C CCW14O13547 238 aa2.74□□□□□ -1.97
TRS120YDR407C KRE1P17260 313 aa2.74□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 25.5 ms