RNA–Protein interactions for RNA: YDR392W

SPT3, Transcript of Subunit of the SAGA and SAGA-like transcriptional regulatory complexes, yeast

Gene SPT3, Length 1,014 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPT3	YDR392W	AYT1	Q12226	474 aa		2.98	□□□□□ -1.93
SPT3	YDR392W	AIM45	Q12480	344 aa	Known RBP	2.98	□□□□□ -1.93
SPT3	YDR392W	INO4	P13902	151 aa		2.97	□□□□□ -1.93
SPT3	YDR392W	MRS4	P23500	304 aa		2.97	□□□□□ -1.93
SPT3	YDR392W	YGL010W	P25338	174 aa		2.97	□□□□□ -1.93
SPT3	YDR392W	YPC1	P38298	316 aa		2.97	□□□□□ -1.93
SPT3	YDR392W	YEA6	P39953	335 aa		2.97	□□□□□ -1.93
SPT3	YDR392W	SNU13	P39990	126 aa	Known RBP	2.97	□□□□□ -1.93
SPT3	YDR392W	YEA4	P40004	342 aa		2.97	□□□□□ -1.93
SPT3	YDR392W	RPL13B	P40212	199 aa	Known RBP	2.97	□□□□□ -1.93
SPT3	YDR392W	SIM1	P40472	476 aa		2.97	□□□□□ -1.93
SPT3	YDR392W	BNS1	P50084	137 aa		2.97	□□□□□ -1.93
SPT3	YDR392W	DYN2	Q02647	92 aa		2.97	□□□□□ -1.93
SPT3	YDR392W	ELC1	Q03071	99 aa		2.97	□□□□□ -1.93
SPT3	YDR392W	EST3	Q03096	181 aa		2.97	□□□□□ -1.93
SPT3	YDR392W	YML079W	Q03629	201 aa		2.97	□□□□□ -1.93
SPT3	YDR392W	YDR286C	Q05530	114 aa		2.97	□□□□□ -1.93
SPT3	YDR392W	CTR3	Q06686	241 aa		2.97	□□□□□ -1.93
SPT3	YDR392W	YOR385W	Q08909	290 aa		2.97	□□□□□ -1.93
SPT3	YDR392W	YLR118C	Q12354	227 aa		2.97	□□□□□ -1.93
SPT3	YDR392W	RPL13A	Q12690	199 aa	Predicted RBP	2.97	□□□□□ -1.93
SPT3	YDR392W	YCR007C	P25354	239 aa		2.96	□□□□□ -1.94
SPT3	YDR392W	MRP49	P32388	137 aa		2.96	□□□□□ -1.94
SPT3	YDR392W	ERG24	P32462	438 aa	Known RBP	2.96	□□□□□ -1.94
SPT3	YDR392W	RPL14A	P36105	138 aa	Known RBP	2.96	□□□□□ -1.94
SPT3	YDR392W	RPL14B	P38754	138 aa	Known RBP	2.96	□□□□□ -1.94
SPT3	YDR392W	PHS1	P40857	217 aa		2.96	□□□□□ -1.94
SPT3	YDR392W	OTU1	P43558	301 aa		2.96	□□□□□ -1.94
SPT3	YDR392W	GPI14	P47088	403 aa	Known RBP	2.96	□□□□□ -1.94
SPT3	YDR392W	TDA4	P47153	279 aa		2.96	□□□□□ -1.94
SPT3	YDR392W	NIF3	P53081	288 aa		2.96	□□□□□ -1.94
SPT3	YDR392W	ALG9	P53868	555 aa	Known RBP	2.96	□□□□□ -1.94
SPT3	YDR392W	YNL184C	P53876	108 aa		2.96	□□□□□ -1.94
SPT3	YDR392W	LOA1	Q06508	300 aa		2.96	□□□□□ -1.94
SPT3	YDR392W	PBP4	Q07362	185 aa	Known RBP	2.96	□□□□□ -1.94
SPT3	YDR392W	COX9	P07255	59 aa		2.95	□□□□□ -1.94
SPT3	YDR392W	YPR170W-B	P0C5R9	85 aa		2.95	□□□□□ -1.94
SPT3	YDR392W	PAU1	P0CE88	120 aa		2.95	□□□□□ -1.94
SPT3	YDR392W	PAU14	P0CE89	120 aa		2.95	□□□□□ -1.94
SPT3	YDR392W	PAU6	P0CE90	120 aa		2.95	□□□□□ -1.94
SPT3	YDR392W	PAU18	P0CE91	120 aa		2.95	□□□□□ -1.94
SPT3	YDR392W	PAU8	P0CE92	120 aa		2.95	□□□□□ -1.94
SPT3	YDR392W	PAU11	P0CE93	120 aa		2.95	□□□□□ -1.94
SPT3	YDR392W	CPR1	P14832	162 aa	Known RBP	2.95	□□□□□ -1.94
SPT3	YDR392W	STE18	P18852	110 aa		2.95	□□□□□ -1.94
SPT3	YDR392W	MRPL27	P36526	146 aa	Predicted RBP	2.95	□□□□□ -1.94
SPT3	YDR392W	MIC12	P38341	106 aa		2.95	□□□□□ -1.94
SPT3	YDR392W	PAU13	P38725	120 aa		2.95	□□□□□ -1.94
SPT3	YDR392W	MSL1	P40567	111 aa	Predicted RBP	2.95	□□□□□ -1.94
SPT3	YDR392W	SMD3	P43321	101 aa	Known RBP	2.95	□□□□□ -1.94
SPT3	YDR392W	PAU4	P53427	120 aa		2.95	□□□□□ -1.94
SPT3	YDR392W	BUD25	P85052	153 aa		2.95	□□□□□ -1.94
SPT3	YDR392W	PAU10	Q03050	120 aa		2.95	□□□□□ -1.94
SPT3	YDR392W	NAT3	Q06504	195 aa		2.95	□□□□□ -1.94
SPT3	YDR392W	PAU20	Q08322	120 aa		2.95	□□□□□ -1.94
SPT3	YDR392W	TPT1	Q12272	230 aa	Known RBP	2.95	□□□□□ -1.94
SPT3	YDR392W	PRR2	Q12310	699 aa		2.95	□□□□□ -1.94
SPT3	YDR392W	ORT1	Q12375	292 aa		2.95	□□□□□ -1.94
SPT3	YDR392W	PAU9	Q3E770	120 aa		2.95	□□□□□ -1.94
SPT3	YDR392W	CMC4	Q3E7A9	73 aa		2.95	□□□□□ -1.94
SPT3	YDR392W	FMP49	A0A023PZB3	126 aa		2.94	□□□□□ -1.94
SPT3	YDR392W	ADH1	P00330	348 aa	Known RBP	2.94	□□□□□ -1.94
SPT3	YDR392W	POR1	P04840	283 aa	Known RBP	2.94	□□□□□ -1.94
SPT3	YDR392W	MEK1	P24719	497 aa	Predicted RBP	2.94	□□□□□ -1.94
SPT3	YDR392W	TIR2	P33890	251 aa		2.94	□□□□□ -1.94
SPT3	YDR392W	PAU16	P35994	123 aa		2.94	□□□□□ -1.94
SPT3	YDR392W	ATX1	P38636	73 aa		2.94	□□□□□ -1.94
SPT3	YDR392W	YHR130C	P38834	111 aa		2.94	□□□□□ -1.94
SPT3	YDR392W	HIT1	P46973	164 aa		2.94	□□□□□ -1.94
SPT3	YDR392W	BXI1	P48558	297 aa		2.94	□□□□□ -1.94
SPT3	YDR392W	LCL1	Q02786	101 aa		2.94	□□□□□ -1.94
SPT3	YDR392W	YPL080C	Q02826	108 aa		2.94	□□□□□ -1.94
SPT3	YDR392W	YLR363W-A	Q3E747	85 aa		2.94	□□□□□ -1.94
SPT3	YDR392W	TIR1	P10863	254 aa		2.93	□□□□□ -1.94
SPT3	YDR392W	FCY2	P17064	533 aa		2.93	□□□□□ -1.94
SPT3	YDR392W	HYP2	P23301	157 aa	Known RBP	2.93	□□□□□ -1.94
SPT3	YDR392W	SPO13	P23624	291 aa		2.93	□□□□□ -1.94
SPT3	YDR392W	IMP1	P28627	190 aa		2.93	□□□□□ -1.94
SPT3	YDR392W	UGX2	P32772	223 aa		2.93	□□□□□ -1.94
SPT3	YDR392W	SLM6	P38343	150 aa		2.93	□□□□□ -1.94
SPT3	YDR392W	YER134C	P40081	178 aa		2.93	□□□□□ -1.94
SPT3	YDR392W	YGR219W	P53307	113 aa		2.93	□□□□□ -1.94
SPT3	YDR392W	YMR090W	Q04304	227 aa	Known RBP	2.93	□□□□□ -1.94
SPT3	YDR392W	SDH7	Q04401	133 aa		2.93	□□□□□ -1.94
SPT3	YDR392W	YDL157C	Q12082	118 aa		2.93	□□□□□ -1.94
SPT3	YDR392W	SMT3	Q12306	101 aa	Known RBP	2.93	□□□□□ -1.94
SPT3	YDR392W	YCR075W-A	Q3E830	75 aa		2.93	□□□□□ -1.94
SPT3	YDR392W	YOS1	Q3E834	85 aa		2.93	□□□□□ -1.94
SPT3	YDR392W	YCL021W-A	Q96VH3	125 aa		2.93	□□□□□ -1.94
SPT3	YDR392W	STF1	P01098	86 aa		2.92	□□□□□ -1.94
SPT3	YDR392W	YDR034C-A	P0C289	58 aa		2.92	□□□□□ -1.94
SPT3	YDR392W	RPL2A	P0CX45	254 aa	Known RBP	2.92	□□□□□ -1.94
SPT3	YDR392W	RPL2B	P0CX46	254 aa	Known RBP	2.92	□□□□□ -1.94
SPT3	YDR392W	DPM1	P14020	267 aa	Known RBP	2.92	□□□□□ -1.94
SPT3	YDR392W	DDR48	P18899	430 aa	Known RBP	2.92	□□□□□ -1.94
SPT3	YDR392W	YUH1	P35127	236 aa		2.92	□□□□□ -1.94
SPT3	YDR392W	TEM1	P38987	245 aa		2.92	□□□□□ -1.94
SPT3	YDR392W	SEC72	P39742	193 aa	Known RBP	2.92	□□□□□ -1.94
SPT3	YDR392W	HAC1	P41546	238 aa		2.92	□□□□□ -1.94
SPT3	YDR392W	ARP3	P47117	449 aa	Known RBP	2.92	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 83.7 ms