RNA–Protein interactions for RNA: YDR353W

TRR1, Transcript of Cytoplasmic thioredoxin reductase, yeast

Gene TRR1, Length 960 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRR1	YDR353W	LCB3	P47013	409 aa		5.82	□□□□□ -1.48
TRR1	YDR353W	SUN4	P53616	420 aa		5.82	□□□□□ -1.48
TRR1	YDR353W	WSC2	P53832	503 aa		5.82	□□□□□ -1.48
TRR1	YDR353W	DAP1	Q12091	152 aa		5.82	□□□□□ -1.48
TRR1	YDR353W	YPR108W-A	Q3E7B3	70 aa		5.82	□□□□□ -1.48
TRR1	YDR353W	RPL11A	P0C0W9	174 aa	Known RBP	5.81	□□□□□ -1.48
TRR1	YDR353W	MRPS5	P33759	307 aa		5.81	□□□□□ -1.48
TRR1	YDR353W	SRX1	P36077	127 aa		5.81	□□□□□ -1.48
TRR1	YDR353W	TDA7	P53882	636 aa	Predicted RBP	5.81	□□□□□ -1.48
TRR1	YDR353W	MRX11	Q03079	207 aa		5.81	□□□□□ -1.48
TRR1	YDR353W	ATG33	Q06485	197 aa		5.81	□□□□□ -1.48
TRR1	YDR353W	RDL2	Q08742	149 aa	Known RBP	5.81	□□□□□ -1.48
TRR1	YDR353W	YLR111W	Q12528	110 aa		5.81	□□□□□ -1.48
TRR1	YDR353W	YDR119W-A	Q2V2P9	66 aa		5.81	□□□□□ -1.48
TRR1	YDR353W	RPL11B	Q3E757	174 aa	Predicted RBP	5.81	□□□□□ -1.48
TRR1	YDR353W	MID2	P36027	376 aa		5.8	□□□□□ -1.48
TRR1	YDR353W	MED6	P38782	295 aa		5.8	□□□□□ -1.48
TRR1	YDR353W	PAU7	P39545	55 aa		5.8	□□□□□ -1.48
TRR1	YDR353W	DSK2	P48510	373 aa		5.8	□□□□□ -1.48
TRR1	YDR353W	YGR050C	P53231	118 aa		5.8	□□□□□ -1.48
TRR1	YDR353W	FCF1	Q05498	189 aa	Predicted RBP	5.8	□□□□□ -1.48
TRR1	YDR353W	FIT3	Q08907	204 aa		5.8	□□□□□ -1.48
TRR1	YDR353W	HUG1	Q6Q5K6	68 aa		5.8	□□□□□ -1.48
TRR1	YDR353W	PHO85	P17157	305 aa		5.79	□□□□□ -1.48
TRR1	YDR353W	RPS2	P25443	254 aa	Known RBP	5.79	□□□□□ -1.48
TRR1	YDR353W	COX12	Q01519	83 aa		5.79	□□□□□ -1.48
TRR1	YDR353W	YIL014C-A	Q02598	104 aa		5.79	□□□□□ -1.48
TRR1	YDR353W	COF1	Q03048	143 aa	Known RBP	5.79	□□□□□ -1.48
TRR1	YDR353W	YHM2	Q04013	314 aa		5.79	□□□□□ -1.48
TRR1	YDR353W	YOR292C	Q08743	309 aa		5.79	□□□□□ -1.48
TRR1	YDR353W	DFM1	Q12743	341 aa	Known RBP	5.79	□□□□□ -1.48
TRR1	YDR353W	SPC29	P33419	253 aa		5.78	□□□□□ -1.48
TRR1	YDR353W	YKL070W	P36087	169 aa		5.78	□□□□□ -1.48
TRR1	YDR353W	KNH1	P50112	268 aa		5.78	□□□□□ -1.48
TRR1	YDR353W	ALG13	P53178	202 aa		5.78	□□□□□ -1.48
TRR1	YDR353W	LSM6	Q06406	86 aa	Known RBP	5.78	□□□□□ -1.48
TRR1	YDR353W	MCH4	Q08268	501 aa		5.78	□□□□□ -1.48
TRR1	YDR353W	YOR186W	Q08560	144 aa		5.78	□□□□□ -1.48
TRR1	YDR353W	TIM18	Q08749	192 aa		5.78	□□□□□ -1.48
TRR1	YDR353W	FCY1	Q12178	158 aa		5.78	□□□□□ -1.48
TRR1	YDR353W	RLM1	Q12224	676 aa		5.78	□□□□□ -1.48
TRR1	YDR353W	YLR302C	O13544	120 aa		5.77	□□□□□ -1.49
TRR1	YDR353W	YPS1	P32329	569 aa		5.77	□□□□□ -1.49
TRR1	YDR353W	TOM6	P33448	61 aa		5.77	□□□□□ -1.49
TRR1	YDR353W	CSH1	P38287	376 aa		5.77	□□□□□ -1.49
TRR1	YDR353W	YHL042W	P38729	150 aa		5.77	□□□□□ -1.49
TRR1	YDR353W	YHR173C	P38864	112 aa		5.77	□□□□□ -1.49
TRR1	YDR353W	RRG8	Q06109	277 aa		5.77	□□□□□ -1.49
TRR1	YDR353W	USV1	Q12132	391 aa		5.77	□□□□□ -1.49
TRR1	YDR353W	YBR255C-A	Q3E776	120 aa		5.77	□□□□□ -1.49
TRR1	YDR353W	NAG1	Q8TGN9	163 aa		5.77	□□□□□ -1.49
TRR1	YDR353W	NRG2	P38082	220 aa		5.76	□□□□□ -1.49
TRR1	YDR353W	SKI6	P46948	246 aa	Predicted RBP	5.76	□□□□□ -1.49
TRR1	YDR353W	YDR042C	Q03205	200 aa		5.76	□□□□□ -1.49
TRR1	YDR353W	RAF1	Q06891	181 aa		5.76	□□□□□ -1.49
TRR1	YDR353W	IRC25	Q07951	179 aa		5.76	□□□□□ -1.49
TRR1	YDR353W	MIM1	Q08176	113 aa		5.76	□□□□□ -1.49
TRR1	YDR353W	DAD1	Q12248	94 aa		5.76	□□□□□ -1.49
TRR1	YDR353W	YOR097C	Q12274	175 aa	Predicted RBP	5.76	□□□□□ -1.49
TRR1	YDR353W	YLR412C-A	Q3E742	68 aa		5.76	□□□□□ -1.49
TRR1	YDR353W	RPL20A	P0CX23	172 aa	Known RBP	5.75	□□□□□ -1.49
TRR1	YDR353W	RPL20B	P0CX24	172 aa	Predicted RBP	5.75	□□□□□ -1.49
TRR1	YDR353W	MRPL49	P40858	161 aa	Predicted RBP	5.75	□□□□□ -1.49
TRR1	YDR353W	YMR316C-A	I2HB70	103 aa		5.74	□□□□□ -1.49
TRR1	YDR353W	RPS14A	P06367	137 aa	Known RBP	5.74	□□□□□ -1.49
TRR1	YDR353W	HSP12	P22943	109 aa	Known RBP	5.74	□□□□□ -1.49
TRR1	YDR353W	ADH5	P38113	351 aa	Known RBP	5.74	□□□□□ -1.49
TRR1	YDR353W	GPI18	P38211	433 aa		5.74	□□□□□ -1.49
TRR1	YDR353W	RPS14B	P39516	138 aa	Known RBP	5.74	□□□□□ -1.49
TRR1	YDR353W	FHN1	P53279	174 aa		5.74	□□□□□ -1.49
TRR1	YDR353W	MSA1	Q08471	629 aa		5.74	□□□□□ -1.49
TRR1	YDR353W	YPS3	Q12303	508 aa		5.74	□□□□□ -1.49
TRR1	YDR353W	MRPL31	P14063	131 aa	Predicted RBP	5.73	□□□□□ -1.49
TRR1	YDR353W	RPB8	P20436	146 aa		5.73	□□□□□ -1.49
TRR1	YDR353W	YCR006C	P25350	157 aa		5.73	□□□□□ -1.49
TRR1	YDR353W	FMP46	P36141	133 aa	Known RBP	5.73	□□□□□ -1.49
TRR1	YDR353W	SFT2	P38166	215 aa		5.73	□□□□□ -1.49
TRR1	YDR353W	YNL217W	P40152	326 aa		5.73	□□□□□ -1.49
TRR1	YDR353W	RHO5	P53879	331 aa	Known RBP	5.73	□□□□□ -1.49
TRR1	YDR353W	TIM10	P87108	93 aa		5.73	□□□□□ -1.49
TRR1	YDR353W	YMR103C	Q04436	120 aa		5.73	□□□□□ -1.49
TRR1	YDR353W	BOL1	Q3E793	110 aa		5.73	□□□□□ -1.49
TRR1	YDR353W	YDR034W-B	Q6Q5X2	51 aa		5.73	□□□□□ -1.49
TRR1	YDR353W	KTI12	P34253	313 aa	Known RBP	5.72	□□□□□ -1.49
TRR1	YDR353W	YHR140W	P38842	239 aa		5.72	□□□□□ -1.49
TRR1	YDR353W	OST1	P41543	476 aa	Known RBP	5.72	□□□□□ -1.49
TRR1	YDR353W	UBC11	P52492	156 aa		5.72	□□□□□ -1.49
TRR1	YDR353W	HST4	P53688	370 aa		5.72	□□□□□ -1.49
TRR1	YDR353W	YPL038W-A	Q3E7B4	63 aa		5.72	□□□□□ -1.49
TRR1	YDR353W	YCL021W-A	Q96VH3	125 aa		5.72	□□□□□ -1.49
TRR1	YDR353W	CYR1	P08678	2026 aa	Known RBP	5.72	□□□□□ -1.49
TRR1	YDR353W	TRP1	P00912	224 aa		5.71	□□□□□ -1.5
TRR1	YDR353W	YCR050C	P25630	102 aa		5.71	□□□□□ -1.5
TRR1	YDR353W	LST8	P41318	303 aa		5.71	□□□□□ -1.5
TRR1	YDR353W	FIP1	P45976	327 aa		5.71	□□□□□ -1.5
TRR1	YDR353W	MST27	P53176	234 aa		5.71	□□□□□ -1.5
TRR1	YDR353W	YHR139C-A	O13536	103 aa		5.7	□□□□□ -1.5
TRR1	YDR353W	RPL2A	P0CX45	254 aa	Known RBP	5.7	□□□□□ -1.5
TRR1	YDR353W	RPL2B	P0CX46	254 aa	Known RBP	5.7	□□□□□ -1.5
TRR1	YDR353W	IMP1	P28627	190 aa		5.7	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms