RNA–Protein interactions for RNA: YDR078C

SHU2, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU2, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU2YDR078C FUN14P18411 198 aa1.78□□□□□ -2.12
SHU2YDR078C QCR10P37299 77 aa1.78□□□□□ -2.12
SHU2YDR078C SFT2P38166 215 aa1.78□□□□□ -2.12
SHU2YDR078C PHS1P40857 217 aa1.78□□□□□ -2.12
SHU2YDR078C SFT1P43682 97 aa1.78□□□□□ -2.12
SHU2YDR078C LCL2Q08045 131 aa1.78□□□□□ -2.12
SHU2YDR078C RAD50P12753 1312 aa1.77□□□□□ -2.13
SHU2YDR078C YGL149WP53116 101 aa1.77□□□□□ -2.13
SHU2YDR078C YPL067CQ02754 198 aa1.77□□□□□ -2.13
SHU2YDR078C SDH7Q04401 133 aa1.77□□□□□ -2.13
SHU2YDR078C NKP2Q06162 153 aa1.77□□□□□ -2.13
SHU2YDR078C Q0144Q9ZZW2 109 aa1.77□□□□□ -2.13
SHU2YDR078C YGL014C-AP0C5N1 53 aa1.76□□□□□ -2.13
SHU2YDR078C UBR1P19812 1950 aa1.76□□□□□ -2.13
SHU2YDR078C MRP49P32388 137 aa1.75□□□□□ -2.13
SHU2YDR078C YIL102CP40488 101 aa1.75□□□□□ -2.13
SHU2YDR078C BRP1P53194 125 aa1.75□□□□□ -2.13
SHU2YDR078C NMT1P14743 455 aa1.74□□□□□ -2.13
SHU2YDR078C HSL1P34244 1518 aa1.74□□□□□ -2.13
SHU2YDR078C YCR001WP25347 104 aa1.73□□□□□ -2.13
SHU2YDR078C SRL3P36167 246 aa1.73□□□□□ -2.13
SHU2YDR078C YOL013W-AP0C272 63 aaPredicted RBP1.72□□□□□ -2.13
SHU2YDR078C RPL40AP0CH08 128 aaKnown RBP1.72□□□□□ -2.13
SHU2YDR078C RPL40BP0CH09 128 aaKnown RBP1.72□□□□□ -2.13
SHU2YDR078C YHR213WP0CI67 198 aa1.72□□□□□ -2.13
SHU2YDR078C ANB1P19211 157 aa1.72□□□□□ -2.13
SHU2YDR078C UTP11P34247 250 aaPredicted RBP1.72□□□□□ -2.13
SHU2YDR078C HSP10P38910 106 aa1.72□□□□□ -2.13
SHU2YDR078C LST8P41318 303 aa1.72□□□□□ -2.13
SHU2YDR078C RPL37AP49166 88 aaKnown RBP1.72□□□□□ -2.13
SHU2YDR078C MPC1P53157 130 aaKnown RBP1.72□□□□□ -2.13
SHU2YDR078C YMR122CQ03879 124 aa1.72□□□□□ -2.13
SHU2YDR078C PAU21P0CE86 164 aa1.71□□□□□ -2.14
SHU2YDR078C PAU22P0CE87 164 aa1.71□□□□□ -2.14
SHU2YDR078C HAP3P13434 144 aa1.71□□□□□ -2.14
SHU2YDR078C YNL122CP53921 115 aaPredicted RBP1.71□□□□□ -2.14
SHU2YDR078C SLO1Q3E784 85 aa1.71□□□□□ -2.14
SHU2YDR078C KTI11Q3E840 82 aa1.71□□□□□ -2.14
SHU2YDR078C HAP2P06774 265 aa1.7□□□□□ -2.14
SHU2YDR078C UGX2P32772 223 aa1.7□□□□□ -2.14
SHU2YDR078C SAE3P89114 91 aa1.7□□□□□ -2.14
SHU2YDR078C PRM3Q08931 133 aa1.7□□□□□ -2.14
SHU2YDR078C MRPL11P36521 249 aaPredicted RBP1.69□□□□□ -2.14
SHU2YDR078C VMA7P39111 118 aa1.69□□□□□ -2.14
SHU2YDR078C GAT4P40569 121 aa1.69□□□□□ -2.14
SHU2YDR078C IRC21Q04772 201 aa1.69□□□□□ -2.14
SHU2YDR078C RIF1P29539 1916 aa1.68□□□□□ -2.14
SHU2YDR078C GTT2Q12390 233 aa1.68□□□□□ -2.14
SHU2YDR078C COA4Q05809 96 aa1.67□□□□□ -2.14
SHU2YDR078C YLR296WQ05898 108 aa1.67□□□□□ -2.14
SHU2YDR078C YOR072WQ08486 104 aa1.67□□□□□ -2.14
SHU2YDR078C YLR099W-AQ3E798 87 aa1.67□□□□□ -2.14
SHU2YDR078C RTC6O14464 93 aa1.66□□□□□ -2.14
SHU2YDR078C SEC59P20048 519 aa1.66□□□□□ -2.14
SHU2YDR078C ERV14P53173 138 aa1.66□□□□□ -2.14
SHU2YDR078C YLR118CQ12354 227 aa1.66□□□□□ -2.14
SHU2YDR078C ROM2P51862 1356 aaKnown RBP1.66□□□□□ -2.14
SHU2YDR078C PFY1P07274 126 aa1.65□□□□□ -2.15
SHU2YDR078C AIM4P38305 123 aaPredicted RBP1.65□□□□□ -2.15
SHU2YDR078C AIM18P38884 321 aa1.65□□□□□ -2.15
SHU2YDR078C AIM11P87275 137 aa1.65□□□□□ -2.15
SHU2YDR078C FRQ1Q06389 190 aa1.65□□□□□ -2.15
SHU2YDR078C WIP1Q2V2P8 89 aa1.65□□□□□ -2.15
SHU2YDR078C YOR376W-AQ3E805 51 aa1.65□□□□□ -2.15
SHU2YDR078C RPS22AP0C0W1 130 aaKnown RBP1.64□□□□□ -2.15
SHU2YDR078C YJL009WP47078 108 aa1.64□□□□□ -2.15
SHU2YDR078C MGR2Q02889 113 aa1.64□□□□□ -2.15
SHU2YDR078C RPS22BQ3E7Y3 130 aaKnown RBP1.64□□□□□ -2.15
SHU2YDR078C SNT2P53127 1403 aa1.64□□□□□ -2.15
SHU2YDR078C YKL044WP36092 106 aa1.63□□□□□ -2.15
SHU2YDR078C RPL36BO14455 100 aaKnown RBP1.62□□□□□ -2.15
SHU2YDR078C RPL36AP05745 100 aaPredicted RBP1.62□□□□□ -2.15
SHU2YDR078C HHY1P39982 102 aa1.62□□□□□ -2.15
SHU2YDR078C AIM36Q03798 255 aa1.62□□□□□ -2.15
SHU2YDR078C LDB18Q07887 179 aa1.62□□□□□ -2.15
SHU2YDR078C MYO2P19524 1574 aaKnown RBP1.62□□□□□ -2.15
SHU2YDR078C CDC39P25655 2108 aaKnown RBP1.61□□□□□ -2.15
SHU2YDR078C GSP1P32835 219 aaKnown RBP1.61□□□□□ -2.15
SHU2YDR078C RPB11P38902 120 aa1.61□□□□□ -2.15
SHU2YDR078C SLH1P53327 1967 aaKnown RBP1.61□□□□□ -2.15
SHU2YDR078C SNF11P38956 169 aa1.6□□□□□ -2.15
SHU2YDR078C APS2Q00381 147 aa1.6□□□□□ -2.15
SHU2YDR078C SPC24Q04477 213 aa1.6□□□□□ -2.15
SHU2YDR078C FCF2Q12035 217 aaPredicted RBP1.6□□□□□ -2.15
SHU2YDR078C RPL37BP51402 88 aaKnown RBP1.59□□□□□ -2.15
SHU2YDR078C GPI19Q04082 140 aa1.59□□□□□ -2.15
SHU2YDR078C HPA2Q06592 156 aa1.59□□□□□ -2.15
SHU2YDR078C YHR213W-BQ8TGK1 99 aa1.59□□□□□ -2.15
SHU2YDR078C MED11Q99278 115 aa1.59□□□□□ -2.15
SHU2YDR078C TRM732Q03496 1420 aa1.58□□□□□ -2.16
SHU2YDR078C YSF3P0C074 85 aaPredicted RBP1.58□□□□□ -2.16
SHU2YDR078C YLR194CQ05777 254 aa1.58□□□□□ -2.16
SHU2YDR078C YBR013CP38215 129 aa1.57□□□□□ -2.16
SHU2YDR078C RPO41P13433 1351 aaKnown RBP1.57□□□□□ -2.16
SHU2YDR078C HFA1P32874 2273 aa1.56□□□□□ -2.16
SHU2YDR078C MVB12P42939 101 aa1.56□□□□□ -2.16
SHU2YDR078C MIC27P50945 234 aa1.56□□□□□ -2.16
SHU2YDR078C COA6Q3E846 104 aa1.56□□□□□ -2.16
SHU2YDR078C ADK1P07170 222 aaKnown RBP1.55□□□□□ -2.16
SHU2YDR078C TDA2P40045 126 aa1.55□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 6.7 ms