RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 CCDC77Q9BR77 488 aa17.7■□□□□ 0.42
PHGDH-223ENST00000641597 GRAP2O75791 330 aa17.69■□□□□ 0.42
PHGDH-223ENST00000641597 TMEM63AO94886 807 aa17.69■□□□□ 0.42
PHGDH-223ENST00000641597 RDXP35241 583 aaKnown RBP17.69■□□□□ 0.42
PHGDH-223ENST00000641597 RFC5P40937 340 aa17.69■□□□□ 0.42
PHGDH-223ENST00000641597 ZPBP2Q6X784 338 aa17.69■□□□□ 0.42
PHGDH-223ENST00000641597 GADL1Q6ZQY3 521 aa17.69■□□□□ 0.42
PHGDH-223ENST00000641597 RELL1Q8IUW5 271 aa17.69■□□□□ 0.42
PHGDH-223ENST00000641597 FAM71DQ8N9W8 422 aa17.69■□□□□ 0.42
PHGDH-223ENST00000641597 DNERQ8NFT8 737 aa17.69■□□□□ 0.42
PHGDH-223ENST00000641597 SLC35B2Q8TB61 432 aa17.69■□□□□ 0.42
PHGDH-223ENST00000641597 SEPT1Q8WYJ6 367 aa17.69■□□□□ 0.42
PHGDH-223ENST00000641597 CPT1BQ92523 772 aa17.69■□□□□ 0.42
PHGDH-223ENST00000641597 STAMBPL1Q96FJ0 436 aa17.69■□□□□ 0.42
PHGDH-223ENST00000641597 TMEM237Q96Q45 408 aa17.69■□□□□ 0.42
PHGDH-223ENST00000641597 NQO1P15559 274 aaKnown RBP17.69■□□□□ 0.42
PHGDH-223ENST00000641597 CA4P22748 312 aa17.69■□□□□ 0.42
PHGDH-223ENST00000641597 COPS2P61201 443 aa17.69■□□□□ 0.42
PHGDH-223ENST00000641597 MTFR1Q15390 333 aa17.69■□□□□ 0.42
PHGDH-223ENST00000641597 KIRREL3Q8IZU9 778 aa17.69■□□□□ 0.42
PHGDH-223ENST00000641597 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.69■□□□□ 0.422e-7■■□□□ 13.6
PHGDH-223ENST00000641597 UBA3Q8TBC4 463 aa17.69■□□□□ 0.42
PHGDH-223ENST00000641597 DENND1AQ8TEH3 1009 aa17.69■□□□□ 0.42
PHGDH-223ENST00000641597 KLHL29Q96CT2 875 aa17.69■□□□□ 0.42
PHGDH-223ENST00000641597 TXNRD2Q9NNW7 524 aa17.69■□□□□ 0.42
PHGDH-223ENST00000641597 PDGFCQ9NRA1 345 aa17.69■□□□□ 0.42
PHGDH-223ENST00000641597 RPL22P35268 128 aaKnown RBP17.68■□□□□ 0.42
PHGDH-223ENST00000641597 CETN2P41208 172 aa17.68■□□□□ 0.42
PHGDH-223ENST00000641597 GCLCP48506 637 aaPredicted RBP17.68■□□□□ 0.42
PHGDH-223ENST00000641597 IGDCC3Q8IVU1 814 aa17.68■□□□□ 0.42
PHGDH-223ENST00000641597 RNF19AQ9NV58 838 aa17.68■□□□□ 0.42
PHGDH-223ENST00000641597 NUMBLQ9Y6R0 609 aa17.68■□□□□ 0.42
PHGDH-223ENST00000641597 GPR25O00155 361 aa17.68■□□□□ 0.42
PHGDH-223ENST00000641597 AVILO75366 819 aa17.68■□□□□ 0.42
PHGDH-223ENST00000641597 GSTA1P08263 222 aa17.68■□□□□ 0.42
PHGDH-223ENST00000641597 RPSAP08865 295 aaKnown RBP17.68■□□□□ 0.42
PHGDH-223ENST00000641597 KRT4P19013 534 aa17.68■□□□□ 0.42
PHGDH-223ENST00000641597 RAD23BP54727 409 aa17.68■□□□□ 0.42
PHGDH-223ENST00000641597 RNASELQ05823 741 aaKnown RBP17.68■□□□□ 0.42
PHGDH-223ENST00000641597 CCDC142Q17RM4 750 aa17.68■□□□□ 0.42
PHGDH-223ENST00000641597 ZC3H18Q86VM9 953 aaKnown RBP17.68■□□□□ 0.42
PHGDH-223ENST00000641597 GPR20Q99678 358 aa17.68■□□□□ 0.42
PHGDH-223ENST00000641597 PAPPA2Q9BXP8 1791 aa17.68■□□□□ 0.42
PHGDH-223ENST00000641597 CALN1Q9BXU9 219 aa17.68■□□□□ 0.42
PHGDH-223ENST00000641597 SPATC1LQ9H0A9 340 aa17.68■□□□□ 0.42
PHGDH-223ENST00000641597 CXCL16Q9H2A7 254 aa17.68■□□□□ 0.42
PHGDH-223ENST00000641597 SYNCQ9H7C4 482 aa17.68■□□□□ 0.42
PHGDH-223ENST00000641597 SOCS7O14512 581 aa17.67■□□□□ 0.42
PHGDH-223ENST00000641597 ALOX15BO15296 676 aa17.67■□□□□ 0.42
PHGDH-223ENST00000641597 MCL1Q07820 350 aa17.67■□□□□ 0.42
PHGDH-223ENST00000641597 PIGHQ14442 188 aaPredicted RBP17.67■□□□□ 0.42
PHGDH-223ENST00000641597 HIF1AQ16665 826 aa17.67■□□□□ 0.42
PHGDH-223ENST00000641597 PREPLQ4J6C6 727 aaPredicted RBP17.67■□□□□ 0.42
PHGDH-223ENST00000641597 ATF7IP2Q5U623 682 aa17.67■□□□□ 0.42
PHGDH-223ENST00000641597 WDR78Q5VTH9 848 aa17.67■□□□□ 0.42
PHGDH-223ENST00000641597 METTL7BQ6UX53 244 aa17.67■□□□□ 0.42
PHGDH-223ENST00000641597 C1orf127Q8N9H9 656 aa17.67■□□□□ 0.42
PHGDH-223ENST00000641597 CHST13Q8NET6 341 aa17.67■□□□□ 0.42
PHGDH-223ENST00000641597 AGAP11Q8TF27 550 aa17.67■□□□□ 0.42
PHGDH-223ENST00000641597 NKD2Q969F2 451 aaPredicted RBP17.67■□□□□ 0.42
PHGDH-223ENST00000641597 FGD4Q96M96 766 aa17.67■□□□□ 0.42
PHGDH-223ENST00000641597 PEBP4Q96S96 227 aa17.67■□□□□ 0.42
PHGDH-223ENST00000641597 MYLK2Q9H1R3 596 aa17.67■□□□□ 0.42
PHGDH-223ENST00000641597 PHTF1Q9UMS5 762 aa17.67■□□□□ 0.42
PHGDH-223ENST00000641597 FARP1Q9Y4F1 1045 aaPredicted RBP17.67■□□□□ 0.42
PHGDH-223ENST00000641597 NOP56O00567 594 aaKnown RBP17.67■□□□□ 0.42
PHGDH-223ENST00000641597 IRF6O14896 467 aa17.67■□□□□ 0.42
PHGDH-223ENST00000641597 LSM8O95777 96 aaKnown RBP17.67■□□□□ 0.42
PHGDH-223ENST00000641597 ITGB3P05106 788 aa17.67■□□□□ 0.42
PHGDH-223ENST00000641597 ITGAVP06756 1048 aa17.67■□□□□ 0.42
PHGDH-223ENST00000641597 EIF4BP23588 611 aaKnown RBP17.67■□□□□ 0.42
PHGDH-223ENST00000641597 ADRA1DP25100 572 aa17.67■□□□□ 0.42
PHGDH-223ENST00000641597 MORF4L2Q15014 288 aa17.67■□□□□ 0.42
PHGDH-223ENST00000641597 CDO1Q16878 200 aa17.67■□□□□ 0.42
PHGDH-223ENST00000641597 Q3C1V9 767 aa17.67■□□□□ 0.42
PHGDH-223ENST00000641597 BBS9Q3SYG4 887 aa17.67■□□□□ 0.42
PHGDH-223ENST00000641597 TRNP1Q6NT89 227 aa17.67■□□□□ 0.42
PHGDH-223ENST00000641597 CCDC33Q8N5R6 958 aa17.67■□□□□ 0.42
PHGDH-223ENST00000641597 CPB2Q96IY4 423 aa17.67■□□□□ 0.42
PHGDH-223ENST00000641597 CLMNQ96JQ2 1002 aa17.67■□□□□ 0.42
PHGDH-223ENST00000641597 ELOVL4Q9GZR5 314 aa17.67■□□□□ 0.42
PHGDH-223ENST00000641597 RABGEF1Q9UJ41 708 aa17.67■□□□□ 0.42
PHGDH-223ENST00000641597 ABHD2P08910 425 aa17.66■□□□□ 0.42
PHGDH-223ENST00000641597 KDELR1P24390 212 aa17.66■□□□□ 0.42
PHGDH-223ENST00000641597 EDNRBP24530 442 aa17.66■□□□□ 0.42
PHGDH-223ENST00000641597 IL9RQ01113 521 aa17.66■□□□□ 0.42
PHGDH-223ENST00000641597 LMNB2Q03252 620 aa17.66■□□□□ 0.42
PHGDH-223ENST00000641597 OVGP1Q12889 678 aa17.66■□□□□ 0.42
PHGDH-223ENST00000641597 LRRC38Q5VT99 294 aa17.66■□□□□ 0.42
PHGDH-223ENST00000641597 FAM160B1Q5W0V3 765 aa17.66■□□□□ 0.42
PHGDH-223ENST00000641597 CDCA2Q69YH5 1023 aaPredicted RBP17.66■□□□□ 0.42
PHGDH-223ENST00000641597 DRICH1Q6PGQ1 229 aaPredicted RBP17.66■□□□□ 0.42
PHGDH-223ENST00000641597 XYLT1Q86Y38 959 aa17.66■□□□□ 0.42
PHGDH-223ENST00000641597 FBXO36Q8NEA4 188 aa17.66■□□□□ 0.42
PHGDH-223ENST00000641597 PPP1R13LQ8WUF5 828 aa17.66■□□□□ 0.42
PHGDH-223ENST00000641597 ERP27Q96DN0 273 aa17.66■□□□□ 0.42
PHGDH-223ENST00000641597 OTUD5Q96G74 571 aa17.66■□□□□ 0.42
PHGDH-223ENST00000641597 CDT1Q9H211 546 aa17.66■□□□□ 0.42
PHGDH-223ENST00000641597 RNPEPQ9H4A4 650 aa17.66■□□□□ 0.42
PHGDH-223ENST00000641597 RXFP1Q9HBX9 757 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms