RNA–Protein interactions for RNA: ENST00000637381.1

CTSD-210, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 374 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-210ENST00000637381 SLC38A8A6NNN8 435 aa13.65□□□□□ -0.22
CTSD-210ENST00000637381 CST3P01034 146 aaPredicted RBP13.65□□□□□ -0.22
CTSD-210ENST00000637381 TNNC2P02585 160 aa13.65□□□□□ -0.22
CTSD-210ENST00000637381 ACAT1P24752 427 aaKnown RBP13.65□□□□□ -0.22
CTSD-210ENST00000637381 LMO2P25791 158 aa13.65□□□□□ -0.22
CTSD-210ENST00000637381 SOX9P48436 509 aa13.65□□□□□ -0.22
CTSD-210ENST00000637381 GPR15P49685 360 aa13.65□□□□□ -0.22
CTSD-210ENST00000637381 CCR3P51677 355 aa13.65□□□□□ -0.22
CTSD-210ENST00000637381 KPNA1P52294 538 aaPredicted RBP13.65□□□□□ -0.22
CTSD-210ENST00000637381 CCINQ13939 588 aa13.65□□□□□ -0.22
CTSD-210ENST00000637381 PSMD6Q15008 389 aa13.65□□□□□ -0.22
CTSD-210ENST00000637381 TAF12Q16514 161 aa13.65□□□□□ -0.22
CTSD-210ENST00000637381 SNRNP35Q16560 246 aaKnown RBP13.65□□□□□ -0.22
CTSD-210ENST00000637381 DDR2Q16832 855 aa13.65□□□□□ -0.22
CTSD-210ENST00000637381 LMBRD2Q68DH5 695 aaPredicted RBP13.65□□□□□ -0.22
CTSD-210ENST00000637381 TSSK4Q6SA08 328 aa13.65□□□□□ -0.22
CTSD-210ENST00000637381 TRAPPC11Q7Z392 1133 aa13.65□□□□□ -0.22
CTSD-210ENST00000637381 SYNPOQ8N3V7 929 aa13.65□□□□□ -0.22
CTSD-210ENST00000637381 USP13Q92995 863 aaPredicted RBP13.65□□□□□ -0.22
CTSD-210ENST00000637381 GZF1Q9H116 711 aaPredicted RBP13.65□□□□□ -0.22
CTSD-210ENST00000637381 TDP1Q9NUW8 608 aa13.65□□□□□ -0.22
CTSD-210ENST00000637381 THG1LQ9NWX6 298 aaKnown RBP13.65□□□□□ -0.22
CTSD-210ENST00000637381 UXTQ9UBK9 157 aaPredicted RBP13.65□□□□□ -0.22
CTSD-210ENST00000637381 CFAP45Q9UL16 551 aa13.65□□□□□ -0.22
CTSD-210ENST00000637381 CDH9Q9ULB4 789 aa13.65□□□□□ -0.22
CTSD-210ENST00000637381 HCRTO43612 131 aa13.64□□□□□ -0.23
CTSD-210ENST00000637381 TADA3O75528 432 aa13.64□□□□□ -0.23
CTSD-210ENST00000637381 STAU1O95793 577 aaKnown RBP13.64□□□□□ -0.23
CTSD-210ENST00000637381 WARSP23381 471 aaKnown RBP13.64□□□□□ -0.23
CTSD-210ENST00000637381 HOXA6P31267 233 aa13.64□□□□□ -0.23
CTSD-210ENST00000637381 ID4P47928 161 aa13.64□□□□□ -0.23
CTSD-210ENST00000637381 CXCL12P48061 93 aa13.64□□□□□ -0.23
CTSD-210ENST00000637381 TNK2Q07912 1038 aa13.64□□□□□ -0.23
CTSD-210ENST00000637381 CYP24A1Q07973 514 aa13.64□□□□□ -0.23
CTSD-210ENST00000637381 PKP1Q13835 747 aa13.64□□□□□ -0.23
CTSD-210ENST00000637381 LRRC32Q14392 662 aa13.64□□□□□ -0.23
CTSD-210ENST00000637381 PPP2R5DQ14738 602 aa13.64□□□□□ -0.23
CTSD-210ENST00000637381 ITPRIPL2Q3MIP1 535 aa13.64□□□□□ -0.23
CTSD-210ENST00000637381 TXNDC8Q6A555 127 aa13.64□□□□□ -0.23
CTSD-210ENST00000637381 ERMP1Q7Z2K6 904 aa13.64□□□□□ -0.23
CTSD-210ENST00000637381 MAB21L3Q8N8X9 362 aa13.64□□□□□ -0.23
CTSD-210ENST00000637381 XXYLT1Q8NBI6 393 aa13.64□□□□□ -0.23
CTSD-210ENST00000637381 CHFRQ96EP1 664 aa13.64□□□□□ -0.23
CTSD-210ENST00000637381 SPATA17Q96L03 361 aa13.64□□□□□ -0.23
CTSD-210ENST00000637381 SMG9Q9H0W8 520 aaKnown RBP13.64□□□□□ -0.23
CTSD-210ENST00000637381 KIF9Q9HAQ2 790 aa13.64□□□□□ -0.23
CTSD-210ENST00000637381 CRTAC1Q9NQ79 661 aa13.64□□□□□ -0.23
CTSD-210ENST00000637381 GKN1Q9NS71 199 aa13.64□□□□□ -0.23
CTSD-210ENST00000637381 FAM13BQ9NYF5 915 aa13.64□□□□□ -0.23
CTSD-210ENST00000637381 CCL26Q9Y258 94 aa13.64□□□□□ -0.23
CTSD-210ENST00000637381 HELZP42694 1942 aaKnown RBP13.64□□□□□ -0.23
CTSD-210ENST00000637381 KLRC4O43908 158 aa13.63□□□□□ -0.23
CTSD-210ENST00000637381 ATP2C2O75185 946 aa13.63□□□□□ -0.23
CTSD-210ENST00000637381 TACC1O75410 805 aa13.63□□□□□ -0.23
CTSD-210ENST00000637381 SLFN14P0C7P3 912 aa13.63□□□□□ -0.23
CTSD-210ENST00000637381 CASP1P29466 404 aa13.63□□□□□ -0.23
CTSD-210ENST00000637381 AVPR1AP37288 418 aa13.63□□□□□ -0.23
CTSD-210ENST00000637381 ME1P48163 572 aa13.63□□□□□ -0.23
CTSD-210ENST00000637381 CLDN10P78369 228 aa13.63□□□□□ -0.23
CTSD-210ENST00000637381 SATB1Q01826 763 aa13.63□□□□□ -0.23
CTSD-210ENST00000637381 CUL4BQ13620 913 aa13.63□□□□□ -0.23
CTSD-210ENST00000637381 RUNX3Q13761 415 aa13.63□□□□□ -0.23
CTSD-210ENST00000637381 MAPRE1Q15691 268 aaKnown RBP13.63□□□□□ -0.23
CTSD-210ENST00000637381 CCDC142Q17RM4 750 aa13.63□□□□□ -0.23
CTSD-210ENST00000637381 KNOP1Q1ED39 458 aaKnown RBP13.63□□□□□ -0.23
CTSD-210ENST00000637381 SDHAF4Q5VUM1 108 aa13.63□□□□□ -0.23
CTSD-210ENST00000637381 FOXD4L5Q5VV16 416 aaPredicted RBP13.63□□□□□ -0.23
CTSD-210ENST00000637381 VSTM1Q6UX27 236 aa13.63□□□□□ -0.23
CTSD-210ENST00000637381 C4orf50Q6ZRC1 276 aa13.63□□□□□ -0.23
CTSD-210ENST00000637381 SPATA2LQ8IUW3 424 aaPredicted RBP13.63□□□□□ -0.23
CTSD-210ENST00000637381 HSCBQ8IWL3 235 aa13.63□□□□□ -0.23
CTSD-210ENST00000637381 KIAA2013Q8IYS2 634 aa13.63□□□□□ -0.23
CTSD-210ENST00000637381 DCLK2Q8N568 766 aa13.63□□□□□ -0.23
CTSD-210ENST00000637381 RIN3Q8TB24 985 aa13.63□□□□□ -0.23
CTSD-210ENST00000637381 NOC3LQ8WTT2 800 aaKnown RBP13.63□□□□□ -0.23
CTSD-210ENST00000637381 FOXD4L4Q8WXT5 416 aaPredicted RBP13.63□□□□□ -0.23
CTSD-210ENST00000637381 ZNF516Q92618 1163 aa13.63□□□□□ -0.23
CTSD-210ENST00000637381 MRPS31Q92665 395 aaKnown RBP13.63□□□□□ -0.23
CTSD-210ENST00000637381 CGRRF1Q99675 332 aa13.63□□□□□ -0.23
CTSD-210ENST00000637381 HPS4Q9NQG7 708 aa13.63□□□□□ -0.23
CTSD-210ENST00000637381 CACNA1AO00555 2505 aa13.63□□□□□ -0.23
CTSD-210ENST00000637381 OTOL1A6NHN0 477 aaPredicted RBP13.62□□□□□ -0.23
CTSD-210ENST00000637381 K7ESF4 209 aa13.62□□□□□ -0.23
CTSD-210ENST00000637381 TRDMT1O14717 391 aaKnown RBP13.62□□□□□ -0.23
CTSD-210ENST00000637381 CLIC2O15247 247 aa13.62□□□□□ -0.23
CTSD-210ENST00000637381 TCF3P15923 654 aa13.62□□□□□ -0.23
CTSD-210ENST00000637381 TGM1P22735 817 aa13.62□□□□□ -0.23
CTSD-210ENST00000637381 TMEM196Q5HYL7 178 aa13.62□□□□□ -0.23
CTSD-210ENST00000637381 HS2ST1Q7LGA3 356 aa13.62□□□□□ -0.23
CTSD-210ENST00000637381 GPR161Q8N6U8 529 aaKnown RBP13.62□□□□□ -0.23
CTSD-210ENST00000637381 RDH13Q8NBN7 331 aa13.62□□□□□ -0.23
CTSD-210ENST00000637381 STKLD1Q8NE28 680 aa13.62□□□□□ -0.23
CTSD-210ENST00000637381 MYCBPAPQ8TBZ2 947 aa13.62□□□□□ -0.23
CTSD-210ENST00000637381 SYT15Q9BQS2 421 aa13.62□□□□□ -0.23
CTSD-210ENST00000637381 XYLT2Q9H1B5 865 aa13.62□□□□□ -0.23
CTSD-210ENST00000637381 BLZF1Q9H2G9 400 aa13.62□□□□□ -0.23
CTSD-210ENST00000637381 VRTNQ9H8Y1 702 aa13.62□□□□□ -0.23
CTSD-210ENST00000637381 SLC39A2Q9NP94 309 aa13.62□□□□□ -0.23
CTSD-210ENST00000637381 RBM12Q9NTZ6 932 aaKnown RBP13.62□□□□□ -0.23
CTSD-210ENST00000637381 DMAC2Q9NW81 257 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms