RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 SPPL2BQ8TCT7 592 aa19.65■□□□□ 0.74
CLN6-212ENST00000636020 C2orf15Q8WU43 125 aaKnown RBP19.65■□□□□ 0.74
CLN6-212ENST00000636020 DKK4Q9UBT3 224 aa19.65■□□□□ 0.74
CLN6-212ENST00000636020 OBSL1O75147 1896 aa19.65■□□□□ 0.74
CLN6-212ENST00000636020 PLXND1Q9Y4D7 1925 aa19.64■□□□□ 0.74
CLN6-212ENST00000636020 CYSRT1A8MQ03 144 aa19.64■□□□□ 0.73
CLN6-212ENST00000636020 ARHGAP33O14559 1287 aa19.64■□□□□ 0.73
CLN6-212ENST00000636020 PRB1P04280 392 aa19.64■□□□□ 0.73
CLN6-212ENST00000636020 CLTAP09496 248 aa19.64■□□□□ 0.73
CLN6-212ENST00000636020 SMARCB1Q12824 385 aa19.64■□□□□ 0.73
CLN6-212ENST00000636020 SLC14A1Q13336 389 aa19.64■□□□□ 0.73
CLN6-212ENST00000636020 BYSLQ13895 437 aaKnown RBP19.64■□□□□ 0.73
CLN6-212ENST00000636020 NBR1Q14596 966 aa19.64■□□□□ 0.73
CLN6-212ENST00000636020 EFCAB13Q8IY85 973 aa19.64■□□□□ 0.73
CLN6-212ENST00000636020 LINC00597Q9H2U6 94 aa19.64■□□□□ 0.73
CLN6-212ENST00000636020 ORC3Q9UBD5 711 aaPredicted RBP19.64■□□□□ 0.73
CLN6-212ENST00000636020 BTBD18B2RXH4 712 aa19.63■□□□□ 0.73
CLN6-212ENST00000636020 HIP1RO75146 1068 aa19.63■□□□□ 0.73
CLN6-212ENST00000636020 TADA3O75528 432 aa19.63■□□□□ 0.73
CLN6-212ENST00000636020 GJB3O75712 270 aa19.63■□□□□ 0.73
CLN6-212ENST00000636020 CHRM1P11229 460 aaPredicted RBP19.63■□□□□ 0.73
CLN6-212ENST00000636020 PAX3P23760 479 aa19.63■□□□□ 0.73
CLN6-212ENST00000636020 MCM7P33993 719 aa19.63■□□□□ 0.73
CLN6-212ENST00000636020 MCL1Q07820 350 aa19.63■□□□□ 0.73
CLN6-212ENST00000636020 GAB4Q2WGN9 574 aa19.63■□□□□ 0.73
CLN6-212ENST00000636020 SKAP1Q86WV1 359 aa19.63■□□□□ 0.73
CLN6-212ENST00000636020 ALLCQ8N6M5 410 aa19.63■□□□□ 0.73
CLN6-212ENST00000636020 TXNDC5Q8NBS9 432 aaKnown RBP19.63■□□□□ 0.73
CLN6-212ENST00000636020 TTC16Q8NEE8 873 aa19.63■□□□□ 0.73
CLN6-212ENST00000636020 SLC22A12Q96S37 553 aa19.63■□□□□ 0.73
CLN6-212ENST00000636020 CYP2S1Q96SQ9 504 aa19.63■□□□□ 0.73
CLN6-212ENST00000636020 HAPLN2Q9GZV7 340 aa19.63■□□□□ 0.73
CLN6-212ENST00000636020 TMEM206Q9H813 350 aa19.63■□□□□ 0.73
CLN6-212ENST00000636020 PCDHB9Q9Y5E1 797 aa19.63■□□□□ 0.73
CLN6-212ENST00000636020 TENM4Q6N022 2769 aa19.62■□□□□ 0.73
CLN6-212ENST00000636020 LACTBL1A8MY62 500 aa19.62■□□□□ 0.73
CLN6-212ENST00000636020 SGK1O00141 431 aa19.62■□□□□ 0.73
CLN6-212ENST00000636020 SLC16A4O15374 487 aa19.62■□□□□ 0.73
CLN6-212ENST00000636020 CLDN3O15551 220 aa19.62■□□□□ 0.73
CLN6-212ENST00000636020 XPOTO43592 962 aaKnown RBP19.62■□□□□ 0.73
CLN6-212ENST00000636020 C1QL1O75973 258 aa19.62■□□□□ 0.73
CLN6-212ENST00000636020 CTDNEP1O95476 244 aa19.62■□□□□ 0.73
CLN6-212ENST00000636020 MAPK7Q13164 816 aa19.62■□□□□ 0.73
CLN6-212ENST00000636020 SPATA1Q5VX52 437 aa19.62■□□□□ 0.73
CLN6-212ENST00000636020 RABEPKQ7Z6M1 372 aa19.62■□□□□ 0.73
CLN6-212ENST00000636020 IL17RCQ8NAC3 791 aa19.62■□□□□ 0.73
CLN6-212ENST00000636020 STKLD1Q8NE28 680 aa19.62■□□□□ 0.73
CLN6-212ENST00000636020 WASF1Q92558 559 aa19.62■□□□□ 0.73
CLN6-212ENST00000636020 CRELD1Q96HD1 420 aa19.62■□□□□ 0.73
CLN6-212ENST00000636020 NTPCRQ9BSD7 190 aaKnown RBP19.62■□□□□ 0.73
CLN6-212ENST00000636020 POLMQ9NP87 494 aaPredicted RBP19.62■□□□□ 0.73
CLN6-212ENST00000636020 ABI2Q9NYB9 513 aaPredicted RBP19.62■□□□□ 0.73
CLN6-212ENST00000636020 MAGED2Q9UNF1 606 aaPredicted RBP19.62■□□□□ 0.73
CLN6-212ENST00000636020 PTPRBP23467 1997 aa19.61■□□□□ 0.73
CLN6-212ENST00000636020 ANK1P16157 1881 aa19.61■□□□□ 0.73
CLN6-212ENST00000636020 TSC2P49815 1807 aa19.61■□□□□ 0.73
CLN6-212ENST00000636020 AP5Z1O43299 807 aa19.61■□□□□ 0.73
CLN6-212ENST00000636020 KLF8O95600 359 aaPredicted RBP19.61■□□□□ 0.73
CLN6-212ENST00000636020 USP17L7P0C7H9 530 aa19.61■□□□□ 0.73
CLN6-212ENST00000636020 CSH1P0DML2 217 aa19.61■□□□□ 0.73
CLN6-212ENST00000636020 CSH2P0DML3 217 aa19.61■□□□□ 0.73
CLN6-212ENST00000636020 FDPSP14324 419 aaKnown RBP19.61■□□□□ 0.73
CLN6-212ENST00000636020 CCT6AP40227 531 aaKnown RBP19.61■□□□□ 0.73
CLN6-212ENST00000636020 GPR15P49685 360 aa19.61■□□□□ 0.73
CLN6-212ENST00000636020 PPP2R3AQ06190 1150 aa19.61■□□□□ 0.73
CLN6-212ENST00000636020 HSF5Q4G112 596 aaPredicted RBP19.61■□□□□ 0.73
CLN6-212ENST00000636020 HAUS3Q68CZ6 603 aa19.61■□□□□ 0.73
CLN6-212ENST00000636020 ZPBP2Q6X784 338 aa19.61■□□□□ 0.73
CLN6-212ENST00000636020 TOGARAM2Q6ZUX3 1019 aa19.61■□□□□ 0.73
CLN6-212ENST00000636020 SLCO6A1Q86UG4 719 aa19.61■□□□□ 0.73
CLN6-212ENST00000636020 HMGB4Q8WW32 186 aa19.61■□□□□ 0.73
CLN6-212ENST00000636020 UBL7Q96S82 380 aaPredicted RBP19.61■□□□□ 0.73
CLN6-212ENST00000636020 C17orf75Q9HAS0 396 aa19.61■□□□□ 0.73
CLN6-212ENST00000636020 BCCIPQ9P287 314 aaKnown RBP eCLIP19.61■□□□□ 0.73
CLN6-212ENST00000636020 DSEQ9UL01 958 aa19.61■□□□□ 0.73
CLN6-212ENST00000636020 APOBEC2Q9Y235 224 aaKnown RBP19.61■□□□□ 0.73
CLN6-212ENST00000636020 SHROOM3Q8TF72 1996 aa19.61■□□□□ 0.73
CLN6-212ENST00000636020 CEP192Q8TEP8 1941 aa19.61■□□□□ 0.73
CLN6-212ENST00000636020 TK2O00142 265 aa19.6■□□□□ 0.73
CLN6-212ENST00000636020 NFATC1O95644 943 aa19.6■□□□□ 0.73
CLN6-212ENST00000636020 SYPP08247 313 aa19.6■□□□□ 0.73
CLN6-212ENST00000636020 TNFSF9P41273 254 aa19.6■□□□□ 0.73
CLN6-212ENST00000636020 STRN3Q13033 797 aa19.6■□□□□ 0.73
CLN6-212ENST00000636020 GLRX5Q86SX6 157 aa19.6■□□□□ 0.73
CLN6-212ENST00000636020 SFTPA1Q8IWL2 248 aa19.6■□□□□ 0.73
CLN6-212ENST00000636020 DIS3L2Q8IYB7 885 aaKnown RBP19.6■□□□□ 0.73
CLN6-212ENST00000636020 DEFB119Q8N690 84 aa19.6■□□□□ 0.73
CLN6-212ENST00000636020 SH3RF2Q8TEC5 729 aa19.6■□□□□ 0.73
CLN6-212ENST00000636020 DRC1Q96MC2 740 aa19.6■□□□□ 0.73
CLN6-212ENST00000636020 TSPAN18Q96SJ8 248 aa19.6■□□□□ 0.73
CLN6-212ENST00000636020 TRPC7Q9HCX4 862 aa19.6■□□□□ 0.73
CLN6-212ENST00000636020 GCNT4Q9P109 453 aa19.6■□□□□ 0.73
CLN6-212ENST00000636020 KIAA1024Q9UPX6 916 aa19.6■□□□□ 0.73
CLN6-212ENST00000636020 CFAP46Q8IYW2 2715 aa19.59■□□□□ 0.73
CLN6-212ENST00000636020 A0A087WV48 116 aa19.59■□□□□ 0.73
CLN6-212ENST00000636020 TRAV19A0A0A6YYK7 116 aa19.59■□□□□ 0.73
CLN6-212ENST00000636020 PIRO00625 290 aa19.59■□□□□ 0.73
CLN6-212ENST00000636020 CKMP06732 381 aa19.59■□□□□ 0.73
CLN6-212ENST00000636020 ADRB2P07550 413 aa19.59■□□□□ 0.73
CLN6-212ENST00000636020 TCF3P15923 654 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms