RNA–Protein interactions for RNA: ENST00000635251.1

PSPC1-207, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 2,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-207ENST00000635251 NXF1Q9UBU9 619 aaKnown RBP11.25□□□□□ -0.61
PSPC1-207ENST00000635251 PCDHGC3Q9UN70 934 aa11.25□□□□□ -0.61
PSPC1-207ENST00000635251 CHKBQ9Y259 395 aa11.25□□□□□ -0.61
PSPC1-207ENST00000635251 WDR91A4D1P6 747 aa11.24□□□□□ -0.61
PSPC1-207ENST00000635251 OGTO15294 1046 aa11.24□□□□□ -0.61
PSPC1-207ENST00000635251 TYROBPO43914 113 aa11.24□□□□□ -0.61
PSPC1-207ENST00000635251 DIAPH2O60879 1101 aa11.24□□□□□ -0.61
PSPC1-207ENST00000635251 ZWINTO95229 277 aa11.24□□□□□ -0.61
PSPC1-207ENST00000635251 TNNC2P02585 160 aa11.24□□□□□ -0.61
PSPC1-207ENST00000635251 PRKCBP05771 671 aa11.24□□□□□ -0.61
PSPC1-207ENST00000635251 KRT19P08727 400 aa11.24□□□□□ -0.61
PSPC1-207ENST00000635251 UBA1P22314 1058 aaKnown RBP11.24□□□□□ -0.61
PSPC1-207ENST00000635251 EFNA5P52803 228 aa11.24□□□□□ -0.61
PSPC1-207ENST00000635251 OSTNP61366 133 aa11.24□□□□□ -0.61
PSPC1-207ENST00000635251 YWHAEP62258 255 aaKnown RBP11.24□□□□□ -0.61
PSPC1-207ENST00000635251 GAD2Q05329 585 aa11.24□□□□□ -0.61
PSPC1-207ENST00000635251 GRM1Q13255 1194 aa11.24□□□□□ -0.61
PSPC1-207ENST00000635251 MTM1Q13496 603 aa11.24□□□□□ -0.61
PSPC1-207ENST00000635251 SURF1Q15526 300 aa11.24□□□□□ -0.61
PSPC1-207ENST00000635251 KLHL38Q2WGJ6 581 aa11.24□□□□□ -0.61
PSPC1-207ENST00000635251 BBS9Q3SYG4 887 aa11.24□□□□□ -0.61
PSPC1-207ENST00000635251 EFHC2Q5JST6 749 aa11.24□□□□□ -0.61
PSPC1-207ENST00000635251 FNBP1LQ5T0N5 605 aa11.24□□□□□ -0.61
PSPC1-207ENST00000635251 ANKRD22Q5VYY1 191 aa11.24□□□□□ -0.61
PSPC1-207ENST00000635251 ZNF772Q68DY9 489 aaPredicted RBP11.24□□□□□ -0.61
PSPC1-207ENST00000635251 DENND1BQ6P3S1 775 aa11.24□□□□□ -0.61
PSPC1-207ENST00000635251 ZNF449Q6P9G9 518 aa11.24□□□□□ -0.61
PSPC1-207ENST00000635251 RGS9BPQ6ZS82 235 aa11.24□□□□□ -0.61
PSPC1-207ENST00000635251 C3orf62Q6ZUJ4 267 aa11.24□□□□□ -0.61
PSPC1-207ENST00000635251 POLNQ7Z5Q5 900 aa11.24□□□□□ -0.61
PSPC1-207ENST00000635251 RFX6Q8HWS3 928 aa11.24□□□□□ -0.61
PSPC1-207ENST00000635251 ZBTB8OSQ8IWT0 167 aa11.24□□□□□ -0.61
PSPC1-207ENST00000635251 THNSL1Q8IYQ7 743 aa11.24□□□□□ -0.61
PSPC1-207ENST00000635251 FBXO36Q8NEA4 188 aa11.24□□□□□ -0.61
PSPC1-207ENST00000635251 DNERQ8NFT8 737 aa11.24□□□□□ -0.61
PSPC1-207ENST00000635251 JOSD2Q8TAC2 188 aa11.24□□□□□ -0.61
PSPC1-207ENST00000635251 CPT1BQ92523 772 aa11.24□□□□□ -0.61
PSPC1-207ENST00000635251 C12orf42Q96LP6 360 aa11.24□□□□□ -0.61
PSPC1-207ENST00000635251 HOXC10Q9NYD6 342 aa11.24□□□□□ -0.61
PSPC1-207ENST00000635251 RABGEF1Q9UJ41 708 aa11.24□□□□□ -0.61
PSPC1-207ENST00000635251 GJA3Q9Y6H8 435 aa11.24□□□□□ -0.61
PSPC1-207ENST00000635251 C3orf70A6NLC5 250 aaPredicted RBP11.24□□□□□ -0.61
PSPC1-207ENST00000635251 MED7O43513 233 aa11.24□□□□□ -0.61
PSPC1-207ENST00000635251 PIAS1O75925 651 aa11.24□□□□□ -0.61
PSPC1-207ENST00000635251 ATP2A2P16615 1042 aaKnown RBP11.24□□□□□ -0.61
PSPC1-207ENST00000635251 RPS12P25398 132 aaKnown RBP11.24□□□□□ -0.61
PSPC1-207ENST00000635251 PSMC1P62191 440 aaKnown RBP11.24□□□□□ -0.61
PSPC1-207ENST00000635251 BASP1P80723 227 aaKnown RBP11.24□□□□□ -0.61
PSPC1-207ENST00000635251 SLC25A11Q02978 314 aaKnown RBP11.24□□□□□ -0.61
PSPC1-207ENST00000635251 CCDC142Q17RM4 750 aa11.24□□□□□ -0.61
PSPC1-207ENST00000635251 AGGF1Q8N302 714 aaeCLIP11.24□□□□□ -0.61
PSPC1-207ENST00000635251 RNF149Q8NC42 400 aa11.24□□□□□ -0.61
PSPC1-207ENST00000635251 KCTD6Q8NC69 237 aa11.24□□□□□ -0.61
PSPC1-207ENST00000635251 ZNF75CPQ92670 426 aaPredicted RBP11.24□□□□□ -0.61
PSPC1-207ENST00000635251 ANKRD36BP1Q96IX9 119 aa11.24□□□□□ -0.61
PSPC1-207ENST00000635251 PCYT2Q99447 389 aa11.24□□□□□ -0.61
PSPC1-207ENST00000635251 PAFAH2Q99487 392 aa11.24□□□□□ -0.61
PSPC1-207ENST00000635251 LRMDAQ9H2I8 198 aa11.24□□□□□ -0.61
PSPC1-207ENST00000635251 PCSK1NQ9UHG2 260 aa11.24□□□□□ -0.61
PSPC1-207ENST00000635251 FARP1Q9Y4F1 1045 aaPredicted RBP11.24□□□□□ -0.61
PSPC1-207ENST00000635251 MYH9P35579 1960 aaKnown RBP11.23□□□□□ -0.61
PSPC1-207ENST00000635251 CLUHO75153 1309 aa11.23□□□□□ -0.61
PSPC1-207ENST00000635251 PARP14Q460N5 1801 aa11.23□□□□□ -0.61
PSPC1-207ENST00000635251 IGKV6D-21A0A0A0MT36 114 aa11.23□□□□□ -0.61
PSPC1-207ENST00000635251 SIGLEC16A6NMB1 481 aa11.23□□□□□ -0.61
PSPC1-207ENST00000635251 SPDYE16A6NNV3 312 aaPredicted RBP11.23□□□□□ -0.61
PSPC1-207ENST00000635251 GOLGA8RI6L899 631 aa11.23□□□□□ -0.61
PSPC1-207ENST00000635251 MSCO60682 206 aa11.23□□□□□ -0.61
PSPC1-207ENST00000635251 LRCH4O75427 683 aa11.23□□□□□ -0.61
PSPC1-207ENST00000635251 MAFO75444 373 aaPredicted RBP11.23□□□□□ -0.61
PSPC1-207ENST00000635251 TROVE2P10155 538 aaKnown RBP eCLIP11.23□□□□□ -0.61
PSPC1-207ENST00000635251 KDELR1P24390 212 aa11.23□□□□□ -0.61
PSPC1-207ENST00000635251 MARK3P27448 753 aa11.23□□□□□ -0.61
PSPC1-207ENST00000635251 CDH5P33151 784 aaPredicted RBP11.23□□□□□ -0.61
PSPC1-207ENST00000635251 RPL22P35268 128 aaKnown RBP11.23□□□□□ -0.61
PSPC1-207ENST00000635251 RAP1GAPP47736 663 aa11.23□□□□□ -0.61
PSPC1-207ENST00000635251 GMPSP49915 693 aaPredicted RBP11.23□□□□□ -0.61
PSPC1-207ENST00000635251 RASA2Q15283 850 aa11.23□□□□□ -0.61
PSPC1-207ENST00000635251 TARBP2Q15633 366 aaKnown RBP11.23□□□□□ -0.61
PSPC1-207ENST00000635251 MAPK6Q16659 721 aa11.23□□□□□ -0.61
PSPC1-207ENST00000635251 PTPN20Q4JDL3 420 aa11.23□□□□□ -0.61
PSPC1-207ENST00000635251 MSS51Q4VC12 460 aa11.23□□□□□ -0.61
PSPC1-207ENST00000635251 OTOAQ7RTW8 1153 aa11.23□□□□□ -0.61
PSPC1-207ENST00000635251 PDIK1LQ8N165 341 aa11.23□□□□□ -0.61
PSPC1-207ENST00000635251 EMC1Q8N766 993 aa11.23□□□□□ -0.61
PSPC1-207ENST00000635251 C10orf82Q8WW14 230 aa11.23□□□□□ -0.61
PSPC1-207ENST00000635251 HSPH1Q92598 858 aa11.23□□□□□ -0.61
PSPC1-207ENST00000635251 ACO2Q99798 780 aaKnown RBP11.23□□□□□ -0.61
PSPC1-207ENST00000635251 FRMD8P1Q9BZ68 369 aaPredicted RBP11.23□□□□□ -0.61
PSPC1-207ENST00000635251 NPHS2Q9NP85 383 aa11.23□□□□□ -0.61
PSPC1-207ENST00000635251 METTL5Q9NRN9 209 aaKnown RBP11.23□□□□□ -0.61
PSPC1-207ENST00000635251 PIM2Q9P1W9 311 aa11.23□□□□□ -0.61
PSPC1-207ENST00000635251 TJP2Q9UDY2 1190 aa11.23□□□□□ -0.61
PSPC1-207ENST00000635251 XPO7Q9UIA9 1087 aaKnown RBP11.23□□□□□ -0.61
PSPC1-207ENST00000635251 ZFP69BQ9UJL9 534 aa11.23□□□□□ -0.61
PSPC1-207ENST00000635251 POLIQ9UNA4 740 aa11.23□□□□□ -0.61
PSPC1-207ENST00000635251 DOCK1Q14185 1865 aa11.23□□□□□ -0.61
PSPC1-207ENST00000635251 FARP2O94887 1054 aaPredicted RBP11.23□□□□□ -0.61
PSPC1-207ENST00000635251 ADRA1DP25100 572 aa11.23□□□□□ -0.61
PSPC1-207ENST00000635251 IL1R2P27930 398 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms