RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 TMEM63BQ5T3F8 832 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 SNX30Q5VWJ9 437 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 FAM117BQ6P1L5 589 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 STX12Q86Y82 276 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 NUP93Q8N1F7 819 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 XXYLT1Q8NBI6 393 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 SLITRK2Q9H156 845 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 PALD1Q9ULE6 856 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 PTPRTO14522 1441 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 POTEMA6NI47 508 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 RAG1P15918 1043 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 SARSP49591 514 aaKnown RBP7.45□□□□□ -1.22
COLCA1-205ENST00000620864 PRKAA2P54646 552 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 OSTNP61366 133 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 SHROOM1Q2M3G4 852 aaPredicted RBP7.45□□□□□ -1.22
COLCA1-205ENST00000620864 TRIM65Q6PJ69 517 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 POTEHQ6S545 545 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 POTEGQ6S5H5 508 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 CLEC17AQ6ZS10 378 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 FRMD5Q7Z6J6 570 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 C17orf50Q8WW18 174 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 SH3KBP1Q96B97 665 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 RNPC3Q96LT9 517 aaKnown RBP7.45□□□□□ -1.22
COLCA1-205ENST00000620864 CCSER2Q9H7U1 834 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 ADGBQ8N7X0 1667 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 ABCC3O15438 1527 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 HEG1Q9ULI3 1381 aa7.45□□□□□ -1.22
COLCA1-205ENST00000620864 UBE2Q2LH0YL09 131 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 LIN7AO14910 233 aaPredicted RBP7.44□□□□□ -1.22
COLCA1-205ENST00000620864 SLC16A3O15427 465 aaKnown RBP7.44□□□□□ -1.22
COLCA1-205ENST00000620864 TLR2O60603 784 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 CCDC81Q6ZN84 652 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 KIAA0408Q6ZU52 694 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 SCN4BQ8IWT1 228 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 E2F7Q96AV8 911 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 DCUN1D1Q96GG9 259 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 ISCUQ9H1K1 167 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 SP110Q9HB58 689 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 ZNF536O15090 1300 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 PRR36Q9H6K5 1346 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 C3orf70A6NLC5 250 aaPredicted RBP7.44□□□□□ -1.22
COLCA1-205ENST00000620864 ERVV-1B6SEH8 477 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 CCNA2P20248 432 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 PSMD4P55036 377 aaKnown RBP7.44□□□□□ -1.22
COLCA1-205ENST00000620864 GPSM2P81274 684 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 ZNF618Q5T7W0 954 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 LIN54Q6MZP7 749 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 FBXO42Q6P3S6 717 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 KLHL24Q6TFL4 600 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 BNC2Q6ZN30 1099 aaPredicted RBP7.44□□□□□ -1.22
COLCA1-205ENST00000620864 MMGT1Q8N4V1 131 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 LINC00116Q8NCU8 138 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 MSTO1Q9BUK6 570 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 MYRFQ9Y2G1 1151 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 COMMD3-BMI1R4GMX3 469 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 UBE2QL1A1L167 161 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.44□□□□□ -1.22
COLCA1-205ENST00000620864 RAP1GAPP47736 663 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 HNMTP50135 292 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 TRAF3Q13114 568 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 NDUFAF6Q330K2 333 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 EDRF1Q3B7T1 1238 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 ZNF280DQ6N043 979 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 CHMP1BQ7LBR1 199 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 PARK7Q99497 189 aaKnown RBP7.44□□□□□ -1.22
COLCA1-205ENST00000620864 ILKAPQ9H0C8 392 aaPredicted RBP7.44□□□□□ -1.22
COLCA1-205ENST00000620864 COMMD9Q9P000 198 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 PAK5Q9P286 719 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 EIF3LQ9Y262 564 aaKnown RBP7.44□□□□□ -1.22
COLCA1-205ENST00000620864 AXIN2Q9Y2T1 843 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 C1orf167Q5SNV9 1468 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 CCDC189A1A4V9 331 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 LRRC53A6NM62 1247 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 AP1G2O75843 785 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 EGFRP00533 1210 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 FYNP06241 537 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 ADD1P35611 737 aaKnown RBP7.44□□□□□ -1.22
COLCA1-205ENST00000620864 MAPKAPK2P49137 400 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 GMFBP60983 142 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 VSNL1P62760 191 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 OASLQ15646 514 aaKnown RBP7.44□□□□□ -1.22
COLCA1-205ENST00000620864 HLFQ16534 295 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 LRRC24Q50LG9 513 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 TMEM110Q86TL2 294 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 EFCAB3Q8N7B9 438 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 SCFD2Q8WU76 684 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 DLG3Q92796 817 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 C2orf40Q9H1Z8 148 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 SH3BP4Q9P0V3 963 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 PCDH10Q9P2E7 1040 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 RFX7Q2KHR2 1363 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 REREQ9P2R6 1566 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 CD3EAPO15446 510 aaKnown RBP7.44□□□□□ -1.22
COLCA1-205ENST00000620864 IL12AP29459 219 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 SCTRP47872 440 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 DDX53Q86TM3 631 aaKnown RBP7.44□□□□□ -1.22
COLCA1-205ENST00000620864 LINC00523Q86TU6 105 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 MARCH10Q8NA82 808 aaPredicted RBP7.44□□□□□ -1.22
COLCA1-205ENST00000620864 FNIP1Q8TF40 1166 aa7.44□□□□□ -1.22
COLCA1-205ENST00000620864 RORBQ92753 470 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms