RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 MYL6P60660 151 aa9.42□□□□□ -0.9
SMAD4-217ENST00000611848 TNNC1P63316 161 aa9.42□□□□□ -0.9
SMAD4-217ENST00000611848 MYL7Q01449 175 aa9.42□□□□□ -0.9
SMAD4-217ENST00000611848 TFF2Q03403 129 aa9.42□□□□□ -0.9
SMAD4-217ENST00000611848 ITIH3Q06033 890 aa9.42□□□□□ -0.9
SMAD4-217ENST00000611848 GPR17Q13304 367 aa9.42□□□□□ -0.9
SMAD4-217ENST00000611848 SMAD4Q13485 552 aaKnown RBP9.42□□□□□ -0.9
SMAD4-217ENST00000611848 SOWAHAQ2M3V2 549 aa9.42□□□□□ -0.9
SMAD4-217ENST00000611848 ZNF699Q32M78 642 aa9.42□□□□□ -0.9
SMAD4-217ENST00000611848 WDR72Q3MJ13 1102 aa9.42□□□□□ -0.9
SMAD4-217ENST00000611848 DCAF17Q5H9S7 520 aaPredicted RBP9.42□□□□□ -0.9
SMAD4-217ENST00000611848 ZNF667Q5HYK9 610 aa9.42□□□□□ -0.9
SMAD4-217ENST00000611848 SYCE2Q6PIF2 218 aa9.42□□□□□ -0.9
SMAD4-217ENST00000611848 FBXO38Q6PIJ6 1188 aa9.42□□□□□ -0.9
SMAD4-217ENST00000611848 RSRC2Q7L4I2 434 aaKnown RBP9.42□□□□□ -0.9
SMAD4-217ENST00000611848 SLC35F6Q8N357 371 aa9.42□□□□□ -0.9
SMAD4-217ENST00000611848 KREMEN2Q8NCW0 462 aa9.42□□□□□ -0.9
SMAD4-217ENST00000611848 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.42□□□□□ -0.9
SMAD4-217ENST00000611848 BAP1Q92560 729 aa9.42□□□□□ -0.9
SMAD4-217ENST00000611848 UBXN4Q92575 508 aa9.42□□□□□ -0.9
SMAD4-217ENST00000611848 PCMTD1Q96MG8 357 aaPredicted RBP9.42□□□□□ -0.9
SMAD4-217ENST00000611848 IMPG2Q9BZV3 1241 aa9.42□□□□□ -0.9
SMAD4-217ENST00000611848 XYLT2Q9H1B5 865 aa9.42□□□□□ -0.9
SMAD4-217ENST00000611848 SFXN1Q9H9B4 322 aa9.42□□□□□ -0.9
SMAD4-217ENST00000611848 AFF4Q9UHB7 1163 aaKnown RBP9.42□□□□□ -0.9
SMAD4-217ENST00000611848 CDC23Q9UJX2 597 aa9.42□□□□□ -0.9
SMAD4-217ENST00000611848 FBXW11Q9UKB1 542 aa9.42□□□□□ -0.9
SMAD4-217ENST00000611848 L1RE1Q9UN81 338 aa9.42□□□□□ -0.9
SMAD4-217ENST00000611848 DOCK6Q96HP0 2047 aa9.41□□□□□ -0.9
SMAD4-217ENST00000611848 WDR27A2RRH5 827 aa9.41□□□□□ -0.9
SMAD4-217ENST00000611848 GABRDO14764 452 aa9.41□□□□□ -0.9
SMAD4-217ENST00000611848 EPHB6O15197 1021 aa9.41□□□□□ -0.9
SMAD4-217ENST00000611848 PMM2O15305 246 aa9.41□□□□□ -0.9
SMAD4-217ENST00000611848 MBTPS2O43462 519 aa9.41□□□□□ -0.9
SMAD4-217ENST00000611848 N4BP1O75113 896 aaKnown RBP9.41□□□□□ -0.9
SMAD4-217ENST00000611848 TACC1O75410 805 aa9.41□□□□□ -0.9
SMAD4-217ENST00000611848 LCA5LO95447 670 aa9.41□□□□□ -0.9
SMAD4-217ENST00000611848 ASS1P00966 412 aaKnown RBP9.41□□□□□ -0.9
SMAD4-217ENST00000611848 CPB1P15086 417 aa9.41□□□□□ -0.9
SMAD4-217ENST00000611848 ATF2P15336 505 aa9.41□□□□□ -0.9
SMAD4-217ENST00000611848 PCSK1P29120 753 aa9.41□□□□□ -0.9
SMAD4-217ENST00000611848 PIK3CAP42336 1068 aa9.41□□□□□ -0.9
SMAD4-217ENST00000611848 ARPP19P56211 112 aa9.41□□□□□ -0.9
SMAD4-217ENST00000611848 KCNMA1Q12791 1236 aa9.41□□□□□ -0.9
SMAD4-217ENST00000611848 SMARCB1Q12824 385 aa9.41□□□□□ -0.9
SMAD4-217ENST00000611848 CLUL1Q15846 466 aa9.41□□□□□ -0.9
SMAD4-217ENST00000611848 LIN9Q5TKA1 542 aa9.41□□□□□ -0.9
SMAD4-217ENST00000611848 PTCRAQ6ISU1 281 aaPredicted RBP9.41□□□□□ -0.9
SMAD4-217ENST00000611848 CES5AQ6NT32 575 aa9.41□□□□□ -0.9
SMAD4-217ENST00000611848 CCDC149Q6ZUS6 474 aa9.41□□□□□ -0.9
SMAD4-217ENST00000611848 ADGRF2Q8IZF7 708 aa9.41□□□□□ -0.9
SMAD4-217ENST00000611848 FBXL13Q8NEE6 735 aa9.41□□□□□ -0.9
SMAD4-217ENST00000611848 CMASQ8NFW8 434 aaPredicted RBP9.41□□□□□ -0.9
SMAD4-217ENST00000611848 TAS1R2Q8TE23 839 aa9.41□□□□□ -0.9
SMAD4-217ENST00000611848 SYN2Q92777 582 aaPredicted RBP9.41□□□□□ -0.9
SMAD4-217ENST00000611848 SLC35C1Q96A29 364 aa9.41□□□□□ -0.9
SMAD4-217ENST00000611848 FAXDC2Q96IV6 333 aa9.41□□□□□ -0.9
SMAD4-217ENST00000611848 ASB2Q96Q27 587 aa9.41□□□□□ -0.9
SMAD4-217ENST00000611848 MMS19Q96T76 1030 aa9.41□□□□□ -0.9
SMAD4-217ENST00000611848 ACBD6Q9BR61 282 aa9.41□□□□□ -0.9
SMAD4-217ENST00000611848 RHOBTB2Q9BYZ6 727 aa9.41□□□□□ -0.9
SMAD4-217ENST00000611848 S1PR5Q9H228 398 aa9.41□□□□□ -0.9
SMAD4-217ENST00000611848 ADAM7Q9H2U9 754 aa9.41□□□□□ -0.9
SMAD4-217ENST00000611848 MMRN2Q9H8L6 949 aa9.41□□□□□ -0.9
SMAD4-217ENST00000611848 ZDHHC7Q9NXF8 308 aa9.41□□□□□ -0.9
SMAD4-217ENST00000611848 GRXCR2A6NFK2 248 aa9.4□□□□□ -0.9
SMAD4-217ENST00000611848 C19orf67A6NJJ6 358 aa9.4□□□□□ -0.9
SMAD4-217ENST00000611848 P4HA2O15460 535 aa9.4□□□□□ -0.9
SMAD4-217ENST00000611848 ZMYND10O75800 440 aa9.4□□□□□ -0.9
SMAD4-217ENST00000611848 CLSTN1O94985 981 aa9.4□□□□□ -0.9
SMAD4-217ENST00000611848 PAPLNO95428 1278 aa9.4□□□□□ -0.9
SMAD4-217ENST00000611848 C8AP07357 584 aa9.4□□□□□ -0.9
SMAD4-217ENST00000611848 SPATA31D3P0C874 917 aa9.4□□□□□ -0.9
SMAD4-217ENST00000611848 WARSP23381 471 aaKnown RBP9.4□□□□□ -0.9
SMAD4-217ENST00000611848 HOXA9P31269 272 aa9.4□□□□□ -0.9
SMAD4-217ENST00000611848 TUBB4BP68371 445 aa9.4□□□□□ -0.9
SMAD4-217ENST00000611848 TSPY1Q01534 308 aa9.4□□□□□ -0.9
SMAD4-217ENST00000611848 CETN1Q12798 172 aa9.4□□□□□ -0.9
SMAD4-217ENST00000611848 TJAP1Q5JTD0 557 aa9.4□□□□□ -0.9
SMAD4-217ENST00000611848 RARS2Q5T160 578 aaKnown RBP9.4□□□□□ -0.9
SMAD4-217ENST00000611848 SPATA31D4Q6ZUB0 917 aa9.4□□□□□ -0.9
SMAD4-217ENST00000611848 TCEAL8Q8IYN2 117 aa9.4□□□□□ -0.9
SMAD4-217ENST00000611848 DCP1BQ8IZD4 617 aaKnown RBP9.4□□□□□ -0.9
SMAD4-217ENST00000611848 NEK11Q8NG66 645 aa9.4□□□□□ -0.9
SMAD4-217ENST00000611848 OR10T2Q8NGX3 314 aa9.4□□□□□ -0.9
SMAD4-217ENST00000611848 C2orf15Q8WU43 125 aaKnown RBP9.4□□□□□ -0.9
SMAD4-217ENST00000611848 NECTIN4Q96NY8 510 aa9.4□□□□□ -0.9
SMAD4-217ENST00000611848 NAPGQ99747 312 aaPredicted RBP9.4□□□□□ -0.9
SMAD4-217ENST00000611848 RTP3Q9BQQ7 232 aa9.4□□□□□ -0.9
SMAD4-217ENST00000611848 ZCWPW1Q9H0M4 648 aa9.4□□□□□ -0.9
SMAD4-217ENST00000611848 NUCKS1Q9H1E3 243 aaKnown RBP9.4□□□□□ -0.9
SMAD4-217ENST00000611848 FAM207AQ9NSI2 230 aaPredicted RBP9.4□□□□□ -0.9
SMAD4-217ENST00000611848 RAB20Q9NX57 234 aa9.4□□□□□ -0.9
SMAD4-217ENST00000611848 DDX43Q9NXZ2 648 aaKnown RBP9.4□□□□□ -0.9
SMAD4-217ENST00000611848 HSFX1Q9UBD0 423 aa9.4□□□□□ -0.9
SMAD4-217ENST00000611848 NXF1Q9UBU9 619 aaKnown RBP9.4□□□□□ -0.9
SMAD4-217ENST00000611848 COQ4Q9Y3A0 265 aa9.4□□□□□ -0.9
SMAD4-217ENST00000611848 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.4□□□□□ -0.9
SMAD4-217ENST00000611848 C2orf16Q68DN1 1984 aa9.4□□□□□ -0.91
SMAD4-217ENST00000611848 TTC28Q96AY4 2481 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms