RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 MMGT1Q8N4V1 131 aa22.8■■□□□ 1.24
USP6NL-204ENST00000606752 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.8■■□□□ 1.24
USP6NL-204ENST00000606752 URGCPQ8TCY9 931 aa22.8■■□□□ 1.24
USP6NL-204ENST00000606752 IPO4Q8TEX9 1081 aaKnown RBP22.8■■□□□ 1.24
USP6NL-204ENST00000606752 SLC35F5Q8WV83 523 aa22.8■■□□□ 1.24
USP6NL-204ENST00000606752 LPIN3Q9BQK8 851 aa22.8■■□□□ 1.24
USP6NL-204ENST00000606752 KANSL3Q9P2N6 904 aa22.8■■□□□ 1.24
USP6NL-204ENST00000606752 PGRMC1O00264 195 aaKnown RBP22.8■■□□□ 1.24
USP6NL-204ENST00000606752 TRIM60Q495X7 471 aa22.8■■□□□ 1.24
USP6NL-204ENST00000606752 DCLRE1AQ6PJP8 1040 aa22.8■■□□□ 1.24
USP6NL-204ENST00000606752 ANKRD52Q8NB46 1076 aa22.8■■□□□ 1.24
USP6NL-204ENST00000606752 B3GALNT2Q8NCR0 500 aa22.8■■□□□ 1.24
USP6NL-204ENST00000606752 STK32AQ8WU08 396 aa22.8■■□□□ 1.24
USP6NL-204ENST00000606752 MCEEQ96PE7 176 aa22.8■■□□□ 1.24
USP6NL-204ENST00000606752 EPC1Q9H2F5 836 aa22.8■■□□□ 1.24
USP6NL-204ENST00000606752 ST7Q9NRC1 585 aa22.8■■□□□ 1.24
USP6NL-204ENST00000606752 KRT3P12035 628 aa22.79■■□□□ 1.24
USP6NL-204ENST00000606752 MAN1A1P33908 653 aa22.79■■□□□ 1.24
USP6NL-204ENST00000606752 MCRS1Q96EZ8 462 aa22.79■■□□□ 1.24
USP6NL-204ENST00000606752 DDX43Q9NXZ2 648 aaKnown RBP22.79■■□□□ 1.24
USP6NL-204ENST00000606752 GOLGA8SH3BPF8 625 aa22.78■■□□□ 1.24
USP6NL-204ENST00000606752 CCDC130P13994 396 aa22.78■■□□□ 1.24
USP6NL-204ENST00000606752 PTPN1P18031 435 aaKnown RBP22.78■■□□□ 1.24
USP6NL-204ENST00000606752 GJA8P48165 433 aa22.78■■□□□ 1.24
USP6NL-204ENST00000606752 MARCKSL1P49006 195 aa22.78■■□□□ 1.24
USP6NL-204ENST00000606752 CD300LGQ6UXG3 332 aa22.78■■□□□ 1.24
USP6NL-204ENST00000606752 RNPC3Q96LT9 517 aaKnown RBP22.78■■□□□ 1.24
USP6NL-204ENST00000606752 ANKZF1Q9H8Y5 726 aa22.78■■□□□ 1.24
USP6NL-204ENST00000606752 PCDHB7Q9Y5E2 793 aa22.78■■□□□ 1.24
USP6NL-204ENST00000606752 RHOXF2BP0C7M4 288 aa22.78■■□□□ 1.24
USP6NL-204ENST00000606752 BCAT1P54687 386 aa22.78■■□□□ 1.24
USP6NL-204ENST00000606752 RWDD2BP57060 319 aa22.78■■□□□ 1.24
USP6NL-204ENST00000606752 SNX16P57768 344 aa22.78■■□□□ 1.24
USP6NL-204ENST00000606752 PDE4CQ08493 712 aa22.78■■□□□ 1.24
USP6NL-204ENST00000606752 DSC1Q08554 894 aa22.78■■□□□ 1.24
USP6NL-204ENST00000606752 PIGHQ14442 188 aaPredicted RBP22.78■■□□□ 1.24
USP6NL-204ENST00000606752 CLUL1Q15846 466 aa22.78■■□□□ 1.24
USP6NL-204ENST00000606752 PMF1Q6P1K2 205 aa22.78■■□□□ 1.24
USP6NL-204ENST00000606752 ANKLE1Q8NAG6 615 aa22.78■■□□□ 1.24
USP6NL-204ENST00000606752 SPATA18Q8TC71 538 aa22.78■■□□□ 1.24
USP6NL-204ENST00000606752 DIS3LQ8TF46 1054 aaKnown RBP22.78■■□□□ 1.24
USP6NL-204ENST00000606752 SCLYQ96I15 445 aa22.78■■□□□ 1.24
USP6NL-204ENST00000606752 HNRNPABQ99729 332 aaKnown RBP22.78■■□□□ 1.24
USP6NL-204ENST00000606752 RHOXF2Q9BQY4 288 aa22.78■■□□□ 1.24
USP6NL-204ENST00000606752 SLC4A5Q9BY07 1137 aa22.78■■□□□ 1.24
USP6NL-204ENST00000606752 RBM12Q9NTZ6 932 aaKnown RBP22.78■■□□□ 1.24
USP6NL-204ENST00000606752 TMEM59LQ9UK28 342 aa22.78■■□□□ 1.24
USP6NL-204ENST00000606752 TIMM13Q9Y5L4 95 aaPredicted RBP22.78■■□□□ 1.24
USP6NL-204ENST00000606752 CAPN15O75808 1086 aa22.77■■□□□ 1.24
USP6NL-204ENST00000606752 CXCL10P02778 98 aa22.77■■□□□ 1.24
USP6NL-204ENST00000606752 ODC1P11926 461 aa22.77■■□□□ 1.24
USP6NL-204ENST00000606752 ACAT1P24752 427 aaKnown RBP22.77■■□□□ 1.24
USP6NL-204ENST00000606752 ADORA2BP29275 332 aa22.77■■□□□ 1.24
USP6NL-204ENST00000606752 RFC1P35251 1148 aaPredicted RBP22.77■■□□□ 1.24
USP6NL-204ENST00000606752 CCL23P55773 120 aa22.77■■□□□ 1.24
USP6NL-204ENST00000606752 BST2Q10589 180 aaKnown RBP22.77■■□□□ 1.24
USP6NL-204ENST00000606752 TMEM110Q86TL2 294 aa22.77■■□□□ 1.24
USP6NL-204ENST00000606752 SLC2A14Q8TDB8 520 aa22.77■■□□□ 1.24
USP6NL-204ENST00000606752 NAP1L3Q99457 506 aaPredicted RBP22.77■■□□□ 1.24
USP6NL-204ENST00000606752 PARD6BQ9BYG5 372 aa22.77■■□□□ 1.24
USP6NL-204ENST00000606752 SBDSQ9Y3A5 250 aaKnown RBP eCLIP22.77■■□□□ 1.24
USP6NL-204ENST00000606752 E5RJQ4 531 aa22.76■■□□□ 1.23
USP6NL-204ENST00000606752 M0QZQ0 153 aa22.76■■□□□ 1.23
USP6NL-204ENST00000606752 TULP2O00295 520 aa22.76■■□□□ 1.23
USP6NL-204ENST00000606752 ATP2C2O75185 946 aa22.76■■□□□ 1.23
USP6NL-204ENST00000606752 DDHD2O94830 711 aa22.76■■□□□ 1.23
USP6NL-204ENST00000606752 CYP11A1P05108 521 aa22.76■■□□□ 1.23
USP6NL-204ENST00000606752 ZNF211Q13398 564 aaPredicted RBP22.76■■□□□ 1.23
USP6NL-204ENST00000606752 PAN2Q504Q3 1202 aaKnown RBP22.76■■□□□ 1.23
USP6NL-204ENST00000606752 ZNF280BQ86YH2 543 aa22.76■■□□□ 1.23
USP6NL-204ENST00000606752 FNIP1Q8TF40 1166 aa22.76■■□□□ 1.23
USP6NL-204ENST00000606752 PPP1R12CQ9BZL4 782 aa22.76■■□□□ 1.23
USP6NL-204ENST00000606752 TBC1D13Q9NVG8 400 aa22.76■■□□□ 1.23
USP6NL-204ENST00000606752 FGGP02679 453 aa22.75■■□□□ 1.23
USP6NL-204ENST00000606752 BRCC3P46736 316 aa22.75■■□□□ 1.23
USP6NL-204ENST00000606752 RGS7P49802 495 aa22.75■■□□□ 1.23
USP6NL-204ENST00000606752 OGDHQ02218 1023 aa22.75■■□□□ 1.23
USP6NL-204ENST00000606752 ZNF252P-AS1Q0IIN9 211 aa22.75■■□□□ 1.23
USP6NL-204ENST00000606752 CCDC70Q6NSX1 233 aa22.75■■□□□ 1.23
USP6NL-204ENST00000606752 METTL23Q86XA0 190 aa22.75■■□□□ 1.23
USP6NL-204ENST00000606752 RHOT1Q8IXI2 618 aa22.75■■□□□ 1.23
USP6NL-204ENST00000606752 NIPA2Q8N8Q9 360 aa22.75■■□□□ 1.23
USP6NL-204ENST00000606752 RSPH1Q8WYR4 309 aa22.75■■□□□ 1.23
USP6NL-204ENST00000606752 DSEQ9UL01 958 aa22.75■■□□□ 1.23
USP6NL-204ENST00000606752 ARHGEF37A1IGU5 675 aa22.75■■□□□ 1.23
USP6NL-204ENST00000606752 PYGMP11217 842 aa22.75■■□□□ 1.23
USP6NL-204ENST00000606752 PCSK1P29120 753 aa22.75■■□□□ 1.23
USP6NL-204ENST00000606752 LBX1P52954 281 aa22.75■■□□□ 1.23
USP6NL-204ENST00000606752 RNASELQ05823 741 aaKnown RBP22.75■■□□□ 1.23
USP6NL-204ENST00000606752 TCTN1Q2MV58 587 aa22.75■■□□□ 1.23
USP6NL-204ENST00000606752 KIAA0319Q5VV43 1072 aa22.75■■□□□ 1.23
USP6NL-204ENST00000606752 OR6B2Q6IFH4 312 aa22.75■■□□□ 1.23
USP6NL-204ENST00000606752 COLGALT2Q8IYK4 626 aa22.75■■□□□ 1.23
USP6NL-204ENST00000606752 ABI1Q8IZP0 508 aa22.75■■□□□ 1.23
USP6NL-204ENST00000606752 FUKQ8N0W3 1084 aa22.75■■□□□ 1.23
USP6NL-204ENST00000606752 JOSD2Q8TAC2 188 aa22.75■■□□□ 1.23
USP6NL-204ENST00000606752 SUSD3Q96L08 255 aa22.75■■□□□ 1.23
USP6NL-204ENST00000606752 SYT15Q9BQS2 421 aa22.75■■□□□ 1.23
USP6NL-204ENST00000606752 PLVAPQ9BX97 442 aa22.75■■□□□ 1.23
USP6NL-204ENST00000606752 CYLDQ9NQC7 956 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms