RNA–Protein interactions for RNA: ENST00000604247.1

SRGAP2-209, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

Gene SRGAP2, Length 2,499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-209ENST00000604247 TRAPPC12Q8WVT3 735 aa13.65□□□□□ -0.22
SRGAP2-209ENST00000604247 PCDH9Q9HC56 1237 aa13.65□□□□□ -0.22
SRGAP2-209ENST00000604247 A8MUI8 341 aa13.65□□□□□ -0.22
SRGAP2-209ENST00000604247 ZBTB42B2RXF5 422 aa13.65□□□□□ -0.22
SRGAP2-209ENST00000604247 ARIH2O95376 493 aa13.65□□□□□ -0.22
SRGAP2-209ENST00000604247 KRT19P08727 400 aa13.65□□□□□ -0.22
SRGAP2-209ENST00000604247 CTCFP49711 727 aaPredicted RBP13.65□□□□□ -0.22
SRGAP2-209ENST00000604247 SLC25A11Q02978 314 aaKnown RBP13.65□□□□□ -0.22
SRGAP2-209ENST00000604247 TAP1Q03518 808 aa13.65□□□□□ -0.22
SRGAP2-209ENST00000604247 NEDD9Q14511 834 aa13.65□□□□□ -0.22
SRGAP2-209ENST00000604247 EFTUD2Q15029 972 aaKnown RBP eCLIP13.65□□□□□ -0.22
SRGAP2-209ENST00000604247 TAF5Q15542 800 aa13.65□□□□□ -0.22
SRGAP2-209ENST00000604247 NOL9Q5SY16 702 aaKnown RBP13.65□□□□□ -0.22
SRGAP2-209ENST00000604247 FNBP1LQ5T0N5 605 aa13.65□□□□□ -0.22
SRGAP2-209ENST00000604247 RNF43Q68DV7 783 aa13.65□□□□□ -0.22
SRGAP2-209ENST00000604247 LBX2Q6XYB7 198 aa13.65□□□□□ -0.22
SRGAP2-209ENST00000604247 NCAPG2Q86XI2 1143 aa13.65□□□□□ -0.22
SRGAP2-209ENST00000604247 GPATCH11Q8N954 259 aa13.65□□□□□ -0.22
SRGAP2-209ENST00000604247 SMC6Q96SB8 1091 aa13.65□□□□□ -0.22
SRGAP2-209ENST00000604247 MAK16Q9BXY0 300 aaKnown RBP13.65□□□□□ -0.22
SRGAP2-209ENST00000604247 PCSK1NQ9UHG2 260 aa13.65□□□□□ -0.22
SRGAP2-209ENST00000604247 PHTF1Q9UMS5 762 aa13.65□□□□□ -0.22
SRGAP2-209ENST00000604247 STK38LQ9Y2H1 464 aa13.65□□□□□ -0.22
SRGAP2-209ENST00000604247 L3MBTL1Q9Y468 752 aa13.65□□□□□ -0.22
SRGAP2-209ENST00000604247 FARP1Q9Y4F1 1045 aaPredicted RBP13.65□□□□□ -0.22
SRGAP2-209ENST00000604247 CEP83Q9Y592 693 aa13.65□□□□□ -0.22
SRGAP2-209ENST00000604247 CLUHO75153 1309 aa13.64□□□□□ -0.23
SRGAP2-209ENST00000604247 SIGLEC16A6NMB1 481 aa13.64□□□□□ -0.23
SRGAP2-209ENST00000604247 CA4P22748 312 aa13.64□□□□□ -0.23
SRGAP2-209ENST00000604247 SLC8A1P32418 973 aa13.64□□□□□ -0.23
SRGAP2-209ENST00000604247 NRLP54845 237 aa13.64□□□□□ -0.23
SRGAP2-209ENST00000604247 PSMC1P62191 440 aaKnown RBP13.64□□□□□ -0.23
SRGAP2-209ENST00000604247 NR1H3Q13133 447 aa13.64□□□□□ -0.23
SRGAP2-209ENST00000604247 TFDP1Q14186 410 aa13.64□□□□□ -0.23
SRGAP2-209ENST00000604247 HIF1AQ16665 826 aa13.64□□□□□ -0.23
SRGAP2-209ENST00000604247 EEF1DP3Q658K8 133 aa13.64□□□□□ -0.23
SRGAP2-209ENST00000604247 CPT1BQ92523 772 aa13.64□□□□□ -0.23
SRGAP2-209ENST00000604247 CPXM1Q96SM3 734 aa13.64□□□□□ -0.23
SRGAP2-209ENST00000604247 NCAPGQ9BPX3 1015 aa13.64□□□□□ -0.23
SRGAP2-209ENST00000604247 PLCD4Q9BRC7 762 aa13.64□□□□□ -0.23
SRGAP2-209ENST00000604247 UBN1Q9NPG3 1134 aa13.64□□□□□ -0.23
SRGAP2-209ENST00000604247 ARHGEF3Q9NR81 526 aa13.64□□□□□ -0.23
SRGAP2-209ENST00000604247 SHOC2Q9UQ13 582 aa13.64□□□□□ -0.23
SRGAP2-209ENST00000604247 TCRBV7S3A2A0A539 114 aa13.64□□□□□ -0.23
SRGAP2-209ENST00000604247 PRPF4O43172 522 aaKnown RBP eCLIP13.64□□□□□ -0.23
SRGAP2-209ENST00000604247 KDELR1P24390 212 aa13.64□□□□□ -0.23
SRGAP2-209ENST00000604247 EDNRBP24530 442 aa13.64□□□□□ -0.23
SRGAP2-209ENST00000604247 RIPK1Q13546 671 aa13.64□□□□□ -0.23
SRGAP2-209ENST00000604247 SPARCL1Q14515 664 aa13.64□□□□□ -0.23
SRGAP2-209ENST00000604247 SH3D19Q5HYK7 790 aa13.64□□□□□ -0.23
SRGAP2-209ENST00000604247 CDCA2Q69YH5 1023 aaPredicted RBP13.64□□□□□ -0.23
SRGAP2-209ENST00000604247 METTL7BQ6UX53 244 aa13.64□□□□□ -0.23
SRGAP2-209ENST00000604247 ASRGL1Q7L266 308 aa13.64□□□□□ -0.23
SRGAP2-209ENST00000604247 GRAMD1AQ96CP6 724 aa13.64□□□□□ -0.23
SRGAP2-209ENST00000604247 NLRP4Q96MN2 994 aa13.64□□□□□ -0.23
SRGAP2-209ENST00000604247 YY1AP1Q9H869 796 aa13.64□□□□□ -0.23
SRGAP2-209ENST00000604247 RABGEF1Q9UJ41 708 aa13.64□□□□□ -0.23
SRGAP2-209ENST00000604247 ADM5C9JUS6 153 aa13.63□□□□□ -0.23
SRGAP2-209ENST00000604247 INO80B-WBP1J3KQ70 363 aa13.63□□□□□ -0.23
SRGAP2-209ENST00000604247 MAGEB2O15479 319 aa13.63□□□□□ -0.23
SRGAP2-209ENST00000604247 DDNO94850 711 aaPredicted RBP13.63□□□□□ -0.23
SRGAP2-209ENST00000604247 FGFR1P11362 822 aa13.63□□□□□ -0.23
SRGAP2-209ENST00000604247 KRT4P19013 534 aa13.63□□□□□ -0.23
SRGAP2-209ENST00000604247 RPL22P35268 128 aaKnown RBP13.63□□□□□ -0.23
SRGAP2-209ENST00000604247 YWHAEP62258 255 aaKnown RBP13.63□□□□□ -0.23
SRGAP2-209ENST00000604247 ACVR2BQ13705 512 aa13.63□□□□□ -0.23
SRGAP2-209ENST00000604247 ACCSLQ4AC99 568 aa13.63□□□□□ -0.23
SRGAP2-209ENST00000604247 POLNQ7Z5Q5 900 aa13.63□□□□□ -0.23
SRGAP2-209ENST00000604247 ZBTB8OSQ8IWT0 167 aa13.63□□□□□ -0.23
SRGAP2-209ENST00000604247 UNC45BQ8IWX7 931 aa13.63□□□□□ -0.23
SRGAP2-209ENST00000604247 DHX37Q8IY37 1157 aaKnown RBP13.63□□□□□ -0.23
SRGAP2-209ENST00000604247 GPC2Q8N158 579 aa13.63□□□□□ -0.23
SRGAP2-209ENST00000604247 AGAP11Q8TF27 550 aa13.63□□□□□ -0.23
SRGAP2-209ENST00000604247 PYROXD1Q8WU10 500 aa13.63□□□□□ -0.23
SRGAP2-209ENST00000604247 WDR83Q9BRX9 315 aaKnown RBP13.63□□□□□ -0.23
SRGAP2-209ENST00000604247 INO80BQ9C086 356 aaPredicted RBP13.63□□□□□ -0.23
SRGAP2-209ENST00000604247 SDCBP2Q9H190 292 aa13.63□□□□□ -0.23
SRGAP2-209ENST00000604247 METTL5Q9NRN9 209 aaKnown RBP13.63□□□□□ -0.23
SRGAP2-209ENST00000604247 STRIP2Q9ULQ0 834 aa13.63□□□□□ -0.23
SRGAP2-209ENST00000604247 ANK1P16157 1881 aa13.63□□□□□ -0.23
SRGAP2-209ENST00000604247 EVPLQ92817 2033 aa13.63□□□□□ -0.23
SRGAP2-209ENST00000604247 TYROBPO43914 113 aa13.63□□□□□ -0.23
SRGAP2-209ENST00000604247 TNNC2P02585 160 aa13.63□□□□□ -0.23
SRGAP2-209ENST00000604247 ERBB2P04626 1255 aa13.63□□□□□ -0.23
SRGAP2-209ENST00000604247 CXCL8P10145 99 aa13.63□□□□□ -0.23
SRGAP2-209ENST00000604247 EZRP15311 586 aaKnown RBP13.63□□□□□ -0.23
SRGAP2-209ENST00000604247 RAD23BP54727 409 aa13.63□□□□□ -0.23
SRGAP2-209ENST00000604247 MXD4Q14582 209 aaPredicted RBP13.63□□□□□ -0.23
SRGAP2-209ENST00000604247 TMEM132AQ24JP5 1023 aa13.63□□□□□ -0.23
SRGAP2-209ENST00000604247 ATF7IP2Q5U623 682 aa13.63□□□□□ -0.23
SRGAP2-209ENST00000604247 MPZL3Q6UWV2 235 aa13.63□□□□□ -0.23
SRGAP2-209ENST00000604247 C3orf62Q6ZUJ4 267 aa13.63□□□□□ -0.23
SRGAP2-209ENST00000604247 NAT8LQ8N9F0 302 aa13.63□□□□□ -0.23
SRGAP2-209ENST00000604247 TWNKQ96RR1 684 aa13.63□□□□□ -0.23
SRGAP2-209ENST00000604247 MYLK2Q9H1R3 596 aa13.63□□□□□ -0.23
SRGAP2-209ENST00000604247 PTPRHQ9HD43 1115 aa13.63□□□□□ -0.23
SRGAP2-209ENST00000604247 HMGXB4Q9UGU5 601 aa13.63□□□□□ -0.23
SRGAP2-209ENST00000604247 MCM8Q9UJA3 840 aa13.63□□□□□ -0.23
SRGAP2-209ENST00000604247 STARD13Q9Y3M8 1113 aa13.63□□□□□ -0.23
SRGAP2-209ENST00000604247 CSDE1O75534 798 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms