RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 SOAT2O75908 522 aa20.55■□□□□ 0.88
PNKP-207ENST00000596014 LRG1P02750 347 aa20.55■□□□□ 0.88
PNKP-207ENST00000596014 HAPLN1P10915 354 aaPredicted RBP20.55■□□□□ 0.88
PNKP-207ENST00000596014 ACO1P21399 889 aaKnown RBP20.55■□□□□ 0.88
PNKP-207ENST00000596014 CYP2F1P24903 491 aa20.55■□□□□ 0.88
PNKP-207ENST00000596014 RAD23BP54727 409 aa20.55■□□□□ 0.88
PNKP-207ENST00000596014 SMAD4Q13485 552 aaKnown RBP20.55■□□□□ 0.88
PNKP-207ENST00000596014 AAK1Q2M2I8 961 aa20.55■□□□□ 0.88
PNKP-207ENST00000596014 MGAT5BQ3V5L5 792 aa20.55■□□□□ 0.88
PNKP-207ENST00000596014 C12orf29Q8N999 325 aa20.55■□□□□ 0.88
PNKP-207ENST00000596014 ATXN2LQ8WWM7 1075 aaKnown RBP20.55■□□□□ 0.88
PNKP-207ENST00000596014 JAKMIP2Q96AA8 810 aa20.55■□□□□ 0.88
PNKP-207ENST00000596014 FAM81BQ96LP2 452 aa20.55■□□□□ 0.88
PNKP-207ENST00000596014 SEPT5Q99719 369 aaPredicted RBP20.55■□□□□ 0.88
PNKP-207ENST00000596014 RHOBTB2Q9BYZ6 727 aa20.55■□□□□ 0.88
PNKP-207ENST00000596014 DNAI2Q9GZS0 605 aa20.55■□□□□ 0.88
PNKP-207ENST00000596014 CDH22Q9UJ99 828 aa20.55■□□□□ 0.88
PNKP-207ENST00000596014 USP15Q9Y4E8 981 aaPredicted RBP20.55■□□□□ 0.88
PNKP-207ENST00000596014 YIPF1Q9Y548 306 aa20.55■□□□□ 0.88
PNKP-207ENST00000596014 TRIM21P19474 475 aaKnown RBP20.54■□□□□ 0.88
PNKP-207ENST00000596014 UBXN1Q04323 297 aa20.54■□□□□ 0.88
PNKP-207ENST00000596014 TWF1Q12792 350 aa20.54■□□□□ 0.88
PNKP-207ENST00000596014 ATAT1Q5SQI0 421 aa20.54■□□□□ 0.88
PNKP-207ENST00000596014 CYP26C1Q6V0L0 522 aa20.54■□□□□ 0.88
PNKP-207ENST00000596014 ENOSF1Q7L5Y1 443 aa20.54■□□□□ 0.88
PNKP-207ENST00000596014 SLC4A11Q8NBS3 891 aa20.54■□□□□ 0.88
PNKP-207ENST00000596014 SMG7Q92540 1137 aaKnown RBP20.54■□□□□ 0.88
PNKP-207ENST00000596014 TMEM176AQ96HP8 235 aa20.54■□□□□ 0.88
PNKP-207ENST00000596014 B3GNT5Q9BYG0 378 aa20.54■□□□□ 0.88
PNKP-207ENST00000596014 PCDHB4Q9Y5E5 795 aa20.54■□□□□ 0.88
PNKP-207ENST00000596014 MYH10P35580 1976 aa20.54■□□□□ 0.88
PNKP-207ENST00000596014 BDNFP23560 247 aa20.54■□□□□ 0.88
PNKP-207ENST00000596014 ALDH1A3P47895 512 aa20.54■□□□□ 0.88
PNKP-207ENST00000596014 MFAP3P55082 362 aa20.54■□□□□ 0.88
PNKP-207ENST00000596014 MRPS5P82675 430 aaKnown RBP20.54■□□□□ 0.88
PNKP-207ENST00000596014 PTCRAQ6ISU1 281 aaPredicted RBP20.54■□□□□ 0.88
PNKP-207ENST00000596014 SUSD6Q92537 303 aa20.54■□□□□ 0.88
PNKP-207ENST00000596014 HEXIM2Q96MH2 286 aaKnown RBP20.54■□□□□ 0.88
PNKP-207ENST00000596014 PIDD1Q9HB75 910 aa20.54■□□□□ 0.88
PNKP-207ENST00000596014 RTN4Q9NQC3 1192 aaKnown RBP20.54■□□□□ 0.88
PNKP-207ENST00000596014 CLDN5O00501 218 aa20.53■□□□□ 0.88
PNKP-207ENST00000596014 XYLBO75191 536 aa20.53■□□□□ 0.88
PNKP-207ENST00000596014 SERPINC1P01008 464 aa20.53■□□□□ 0.88
PNKP-207ENST00000596014 POU2F2P09086 479 aa20.53■□□□□ 0.88
PNKP-207ENST00000596014 KCNQ1P51787 676 aa20.53■□□□□ 0.88
PNKP-207ENST00000596014 PLD1Q13393 1074 aa20.53■□□□□ 0.88
PNKP-207ENST00000596014 SYCP1Q15431 976 aa20.53■□□□□ 0.88
PNKP-207ENST00000596014 PUS10Q3MIT2 529 aaKnown RBP20.53■□□□□ 0.88
PNKP-207ENST00000596014 FILIP1LQ4L180 1135 aa20.53■□□□□ 0.88
PNKP-207ENST00000596014 KLHDC7AQ5VTJ3 777 aa20.53■□□□□ 0.88
PNKP-207ENST00000596014 TMEM270Q6UE05 265 aa20.53■□□□□ 0.88
PNKP-207ENST00000596014 VSTM1Q6UX27 236 aa20.53■□□□□ 0.88
PNKP-207ENST00000596014 PAQR9Q6ZVX9 377 aa20.53■□□□□ 0.88
PNKP-207ENST00000596014 FUKQ8N0W3 1084 aa20.53■□□□□ 0.88
PNKP-207ENST00000596014 TRIM44Q96DX7 344 aaPredicted RBP20.53■□□□□ 0.88
PNKP-207ENST00000596014 RIPOR3Q96MK2 946 aa20.53■□□□□ 0.88
PNKP-207ENST00000596014 LSM14BQ9BX40 385 aaKnown RBP20.53■□□□□ 0.88
PNKP-207ENST00000596014 ZNF518BQ9C0D4 1074 aa20.53■□□□□ 0.88
PNKP-207ENST00000596014 CEP72Q9P209 647 aa20.53■□□□□ 0.88
PNKP-207ENST00000596014 DNAJC12Q9UKB3 198 aa20.53■□□□□ 0.88
PNKP-207ENST00000596014 SIK3Q9Y2K2 1263 aa20.53■□□□□ 0.88
PNKP-207ENST00000596014 NOTCH4Q99466 2003 aa20.52■□□□□ 0.88
PNKP-207ENST00000596014 RNF225M0QZC1 329 aaPredicted RBP20.52■□□□□ 0.88
PNKP-207ENST00000596014 TEX33O43247 280 aa20.52■□□□□ 0.88
PNKP-207ENST00000596014 CCDC130P13994 396 aa20.52■□□□□ 0.88
PNKP-207ENST00000596014 ATF6P18850 670 aa20.52■□□□□ 0.88
PNKP-207ENST00000596014 MTHFRP42898 656 aa20.52■□□□□ 0.88
PNKP-207ENST00000596014 MAGEA11P43364 429 aa20.52■□□□□ 0.88
PNKP-207ENST00000596014 KLK7P49862 253 aa20.52■□□□□ 0.88
PNKP-207ENST00000596014 EPHB3P54753 998 aa20.52■□□□□ 0.88
PNKP-207ENST00000596014 CBX2Q14781 532 aaPredicted RBP20.52■□□□□ 0.88
PNKP-207ENST00000596014 DDR2Q16832 855 aa20.52■□□□□ 0.88
PNKP-207ENST00000596014 ARHGAP44Q17R89 818 aa20.52■□□□□ 0.88
PNKP-207ENST00000596014 SLC2A14Q8TDB8 520 aa20.52■□□□□ 0.88
PNKP-207ENST00000596014 CYFIP2Q96F07 1278 aa20.52■□□□□ 0.88
PNKP-207ENST00000596014 NAP1L5Q96NT1 182 aaPredicted RBP20.52■□□□□ 0.88
PNKP-207ENST00000596014 ERGIC2Q96RQ1 377 aa20.52■□□□□ 0.88
PNKP-207ENST00000596014 MED10Q9BTT4 135 aa20.52■□□□□ 0.88
PNKP-207ENST00000596014 PLCB1Q9NQ66 1216 aa20.52■□□□□ 0.88
PNKP-207ENST00000596014 FAM49BQ9NUQ9 324 aa20.52■□□□□ 0.88
PNKP-207ENST00000596014 CNTN6Q9UQ52 1028 aa20.52■□□□□ 0.88
PNKP-207ENST00000596014 A0A1B0GTH6 734 aa20.51■□□□□ 0.87
PNKP-207ENST00000596014 FANCCQ00597 558 aa20.51■□□□□ 0.87
PNKP-207ENST00000596014 SMAD2Q15796 467 aaKnown RBP20.51■□□□□ 0.87
PNKP-207ENST00000596014 IQCEQ6IPM2 695 aa20.51■□□□□ 0.87
PNKP-207ENST00000596014 GRASPQ7Z6J2 395 aaPredicted RBP20.51■□□□□ 0.87
PNKP-207ENST00000596014 ZNF512Q96ME7 567 aaPredicted RBP20.51■□□□□ 0.87
PNKP-207ENST00000596014 NECTIN4Q96NY8 510 aa20.51■□□□□ 0.87
PNKP-207ENST00000596014 ASB2Q96Q27 587 aa20.51■□□□□ 0.87
PNKP-207ENST00000596014 AJAP1Q9UKB5 411 aaPredicted RBP20.51■□□□□ 0.87
PNKP-207ENST00000596014 A0A0C4DFX4 3053 aa20.51■□□□□ 0.87
PNKP-207ENST00000596014 SLC34A2O95436 690 aa20.51■□□□□ 0.87
PNKP-207ENST00000596014 UCHL3P15374 230 aa20.51■□□□□ 0.87
PNKP-207ENST00000596014 GPR15P49685 360 aa20.51■□□□□ 0.87
PNKP-207ENST00000596014 RPL10AP62906 217 aaKnown RBP20.51■□□□□ 0.87
PNKP-207ENST00000596014 NR1I3Q14994 352 aa20.51■□□□□ 0.87
PNKP-207ENST00000596014 FAM35AQ86V20 835 aa20.51■□□□□ 0.87
PNKP-207ENST00000596014 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.51■□□□□ 0.87
PNKP-207ENST00000596014 SCN4BQ8IWT1 228 aa20.51■□□□□ 0.87
PNKP-207ENST00000596014 ELMOD1Q8N336 334 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms