RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 CLDN5O00501 218 aa16.32■□□□□ 0.2
TRIM47-206ENST00000592942 P4HA2O15460 535 aa16.32■□□□□ 0.2
TRIM47-206ENST00000592942 ASGR2P07307 311 aa16.32■□□□□ 0.2
TRIM47-206ENST00000592942 CCDC192P0DO97 292 aa16.32■□□□□ 0.2
TRIM47-206ENST00000592942 GJA1P17302 382 aa16.32■□□□□ 0.2
TRIM47-206ENST00000592942 CEBPBP17676 345 aa16.32■□□□□ 0.2
TRIM47-206ENST00000592942 HOXD11P31277 338 aaPredicted RBP16.32■□□□□ 0.2
TRIM47-206ENST00000592942 MAGEA11P43364 429 aa16.32■□□□□ 0.2
TRIM47-206ENST00000592942 CACNA2D1P54289 1103 aa16.32■□□□□ 0.2
TRIM47-206ENST00000592942 ORC1Q13415 861 aa16.32■□□□□ 0.2
TRIM47-206ENST00000592942 MTMR3Q13615 1198 aa16.32■□□□□ 0.2
TRIM47-206ENST00000592942 MAPRE1Q15691 268 aaKnown RBP16.32■□□□□ 0.2
TRIM47-206ENST00000592942 IQCEQ6IPM2 695 aa16.32■□□□□ 0.2
TRIM47-206ENST00000592942 GAREM2Q75VX8 874 aa16.32■□□□□ 0.2
TRIM47-206ENST00000592942 ACOT1Q86TX2 421 aa16.32■□□□□ 0.2
TRIM47-206ENST00000592942 NPAS3Q8IXF0 933 aa16.32■□□□□ 0.2
TRIM47-206ENST00000592942 ELMOD1Q8N336 334 aa16.32■□□□□ 0.2
TRIM47-206ENST00000592942 EHBP1Q8NDI1 1231 aa16.32■□□□□ 0.2
TRIM47-206ENST00000592942 STKLD1Q8NE28 680 aa16.32■□□□□ 0.2
TRIM47-206ENST00000592942 ST13P5Q8NFI4 369 aaPredicted RBP16.32■□□□□ 0.2
TRIM47-206ENST00000592942 RSAD2Q8WXG1 361 aa16.32■□□□□ 0.2
TRIM47-206ENST00000592942 CNOT6LQ96LI5 555 aaKnown RBP16.32■□□□□ 0.2
TRIM47-206ENST00000592942 ZSWIM3Q96MP5 696 aa16.32■□□□□ 0.2
TRIM47-206ENST00000592942 ARID3AQ99856 593 aa16.32■□□□□ 0.2
TRIM47-206ENST00000592942 RPP25Q9BUL9 199 aaKnown RBP16.32■□□□□ 0.2
TRIM47-206ENST00000592942 IMPG2Q9BZV3 1241 aa16.32■□□□□ 0.2
TRIM47-206ENST00000592942 ELOVL4Q9GZR5 314 aa16.32■□□□□ 0.2
TRIM47-206ENST00000592942 THAP9Q9H5L6 903 aa16.32■□□□□ 0.2
TRIM47-206ENST00000592942 KCNK12Q9HB15 430 aa16.32■□□□□ 0.2
TRIM47-206ENST00000592942 MRPS23Q9Y3D9 190 aaKnown RBP16.32■□□□□ 0.2
TRIM47-206ENST00000592942 CILPO75339 1184 aa16.31■□□□□ 0.2
TRIM47-206ENST00000592942 AFPP02771 609 aaKnown RBP16.31■□□□□ 0.2
TRIM47-206ENST00000592942 MYL4P12829 197 aa16.31■□□□□ 0.2
TRIM47-206ENST00000592942 PTMSP20962 102 aa16.31■□□□□ 0.2
TRIM47-206ENST00000592942 CYP27A1Q02318 531 aa16.31■□□□□ 0.2
TRIM47-206ENST00000592942 WDR44Q5JSH3 913 aa16.31■□□□□ 0.2
TRIM47-206ENST00000592942 CYP4A22Q5TCH4 519 aa16.31■□□□□ 0.2
TRIM47-206ENST00000592942 VSTM1Q6UX27 236 aa16.31■□□□□ 0.2
TRIM47-206ENST00000592942 C4orf50Q6ZRC1 276 aa16.31■□□□□ 0.2
TRIM47-206ENST00000592942 C11orf57Q6ZUT1 292 aaPredicted RBP16.31■□□□□ 0.2
TRIM47-206ENST00000592942 PDZD4Q76G19 769 aaPredicted RBP16.31■□□□□ 0.2
TRIM47-206ENST00000592942 TMEM150AQ86TG1 271 aa16.31■□□□□ 0.2
TRIM47-206ENST00000592942 FUKQ8N0W3 1084 aa16.31■□□□□ 0.2
TRIM47-206ENST00000592942 UBR7Q8N806 425 aa16.31■□□□□ 0.2
TRIM47-206ENST00000592942 C12orf29Q8N999 325 aa16.31■□□□□ 0.2
TRIM47-206ENST00000592942 SHKBP1Q8TBC3 707 aa16.31■□□□□ 0.2
TRIM47-206ENST00000592942 ENOX1Q8TC92 643 aaKnown RBP16.31■□□□□ 0.2
TRIM47-206ENST00000592942 ING5Q8WYH8 240 aa16.31■□□□□ 0.2
TRIM47-206ENST00000592942 MCRS1Q96EZ8 462 aa16.31■□□□□ 0.2
TRIM47-206ENST00000592942 ZNF518BQ9C0D4 1074 aa16.31■□□□□ 0.2
TRIM47-206ENST00000592942 ASAH2Q9NR71 780 aa16.31■□□□□ 0.2
TRIM47-206ENST00000592942 SAMSN1Q9NSI8 373 aaKnown RBP16.31■□□□□ 0.2
TRIM47-206ENST00000592942 DACH1Q9UI36 760 aa16.31■□□□□ 0.2
TRIM47-206ENST00000592942 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.31■□□□□ 0.2
TRIM47-206ENST00000592942 ZFP37Q9Y6Q3 630 aaPredicted RBP16.31■□□□□ 0.2
TRIM47-206ENST00000592942 PTPRDP23468 1912 aa16.31■□□□□ 0.2
TRIM47-206ENST00000592942 ZNF197O14709 1029 aa16.3■□□□□ 0.2
TRIM47-206ENST00000592942 DCXO43602 365 aa16.3■□□□□ 0.2
TRIM47-206ENST00000592942 LRMPQ12912 555 aa16.3■□□□□ 0.2
TRIM47-206ENST00000592942 SASS6Q6UVJ0 657 aa16.3■□□□□ 0.2
TRIM47-206ENST00000592942 ITIH5Q86UX2 942 aa16.3■□□□□ 0.2
TRIM47-206ENST00000592942 LEMD2Q8NC56 503 aa16.3■□□□□ 0.2
TRIM47-206ENST00000592942 CCDC150Q8NCX0 1101 aa16.3■□□□□ 0.2
TRIM47-206ENST00000592942 TNIP3Q96KP6 325 aa16.3■□□□□ 0.2
TRIM47-206ENST00000592942 SMOC2Q9H3U7 446 aa16.3■□□□□ 0.2
TRIM47-206ENST00000592942 CISHQ9NSE2 258 aa16.3■□□□□ 0.2
TRIM47-206ENST00000592942 ARIH1Q9Y4X5 557 aaPredicted RBP16.3■□□□□ 0.2
TRIM47-206ENST00000592942 TRIOO75962 3097 aa16.3■□□□□ 0.2
TRIM47-206ENST00000592942 A0A1W2PRU2 124 aa16.29■□□□□ 0.2
TRIM47-206ENST00000592942 SLC38A8A6NNN8 435 aa16.29■□□□□ 0.2
TRIM47-206ENST00000592942 NOL4O94818 638 aa16.29■□□□□ 0.2
TRIM47-206ENST00000592942 CLSTN1O94985 981 aa16.29■□□□□ 0.2
TRIM47-206ENST00000592942 F11P03951 625 aa16.29■□□□□ 0.2
TRIM47-206ENST00000592942 CD58P19256 250 aa16.29■□□□□ 0.2
TRIM47-206ENST00000592942 RAD23BP54727 409 aa16.29■□□□□ 0.2
TRIM47-206ENST00000592942 RPL10AP62906 217 aaKnown RBP16.29■□□□□ 0.2
TRIM47-206ENST00000592942 CUL2Q13617 745 aa16.29■□□□□ 0.2
TRIM47-206ENST00000592942 HTR4Q13639 388 aa16.29■□□□□ 0.2
TRIM47-206ENST00000592942 TEAD2Q15562 447 aa16.29■□□□□ 0.2
TRIM47-206ENST00000592942 NFKBIBQ15653 356 aa16.29■□□□□ 0.2
TRIM47-206ENST00000592942 PTPN21Q16825 1174 aa16.29■□□□□ 0.2
TRIM47-206ENST00000592942 KLHL40Q2TBA0 621 aa16.29■□□□□ 0.2
TRIM47-206ENST00000592942 HSP90AA4PQ58FG1 418 aa16.29■□□□□ 0.2
TRIM47-206ENST00000592942 CAVIN1Q6NZI2 390 aaKnown RBP16.29■□□□□ 0.2
TRIM47-206ENST00000592942 PARM1Q6UWI2 310 aa16.29■□□□□ 0.2
TRIM47-206ENST00000592942 CREBRFQ8IUR6 639 aa16.29■□□□□ 0.2
TRIM47-206ENST00000592942 SCN4BQ8IWT1 228 aa16.29■□□□□ 0.2
TRIM47-206ENST00000592942 SLC44A3Q8N4M1 653 aa16.29■□□□□ 0.2
TRIM47-206ENST00000592942 FAM200AQ8TCP9 573 aa16.29■□□□□ 0.2
TRIM47-206ENST00000592942 FGF14Q92915 247 aa16.29■□□□□ 0.2
TRIM47-206ENST00000592942 KAT5Q92993 513 aa16.29■□□□□ 0.2
TRIM47-206ENST00000592942 SPATA17Q96L03 361 aa16.29■□□□□ 0.2
TRIM47-206ENST00000592942 C8orf48Q96LL4 319 aa16.29■□□□□ 0.2
TRIM47-206ENST00000592942 MYRFLQ96LU7 910 aa16.29■□□□□ 0.2
TRIM47-206ENST00000592942 NT5C1AQ9BXI3 368 aa16.29■□□□□ 0.2
TRIM47-206ENST00000592942 C11orf16Q9NQ32 467 aa16.29■□□□□ 0.2
TRIM47-206ENST00000592942 ANO10Q9NW15 660 aa16.29■□□□□ 0.2
TRIM47-206ENST00000592942 GDE1Q9NZC3 331 aa16.29■□□□□ 0.2
TRIM47-206ENST00000592942 GREB1Q4ZG55 1949 aa16.28■□□□□ 0.2
TRIM47-206ENST00000592942 F8VP50 259 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms