RNA–Protein interactions for RNA: ENST00000592444.5

ERCC1-216, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-216ENST00000592444 CDK4P11802 303 aa5.53□□□□□ -1.52
ERCC1-216ENST00000592444 ATP4AP20648 1035 aa5.53□□□□□ -1.52
ERCC1-216ENST00000592444 CHRNA4P43681 627 aa5.53□□□□□ -1.52
ERCC1-216ENST00000592444 RAB27AP51159 221 aa5.53□□□□□ -1.52
ERCC1-216ENST00000592444 SMTNP53814 917 aa5.53□□□□□ -1.52
ERCC1-216ENST00000592444 GABREP78334 506 aa5.53□□□□□ -1.52
ERCC1-216ENST00000592444 DSC1Q08554 894 aa5.53□□□□□ -1.52
ERCC1-216ENST00000592444 TBR1Q16650 682 aa5.53□□□□□ -1.52
ERCC1-216ENST00000592444 ZXDCQ2QGD7 858 aaPredicted RBP5.53□□□□□ -1.52
ERCC1-216ENST00000592444 STXBP5Q5T5C0 1151 aa5.53□□□□□ -1.52
ERCC1-216ENST00000592444 FAM171A1Q5VUB5 890 aa5.53□□□□□ -1.52
ERCC1-216ENST00000592444 TRIM68Q6AZZ1 485 aa5.53□□□□□ -1.52
ERCC1-216ENST00000592444 IL27RAQ6UWB1 636 aa5.53□□□□□ -1.52
ERCC1-216ENST00000592444 SPNS3Q6ZMD2 512 aa5.53□□□□□ -1.52
ERCC1-216ENST00000592444 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.53□□□□□ -1.52
ERCC1-216ENST00000592444 NLRX1Q86UT6 975 aa5.53□□□□□ -1.52
ERCC1-216ENST00000592444 CHD1LQ86WJ1 897 aa5.53□□□□□ -1.52
ERCC1-216ENST00000592444 ADGRF4Q8IZF3 695 aa5.53□□□□□ -1.52
ERCC1-216ENST00000592444 LSMEM2Q8N112 164 aa5.53□□□□□ -1.52
ERCC1-216ENST00000592444 LINC01465Q8N7H1 131 aa5.53□□□□□ -1.52
ERCC1-216ENST00000592444 SHKBP1Q8TBC3 707 aa5.53□□□□□ -1.52
ERCC1-216ENST00000592444 BPIFB1Q8TDL5 484 aa5.53□□□□□ -1.52
ERCC1-216ENST00000592444 USP33Q8TEY7 942 aa5.53□□□□□ -1.52
ERCC1-216ENST00000592444 TBC1D32Q96NH3 1257 aa5.53□□□□□ -1.52
ERCC1-216ENST00000592444 SCLT1Q96NL6 688 aa5.53□□□□□ -1.52
ERCC1-216ENST00000592444 UNKQ9C0B0 810 aaKnown RBP5.53□□□□□ -1.52
ERCC1-216ENST00000592444 EBF3Q9H4W6 596 aa5.53□□□□□ -1.52
ERCC1-216ENST00000592444 MIOSQ9NXC5 875 aa5.53□□□□□ -1.52
ERCC1-216ENST00000592444 ANAPC2Q9UJX6 822 aa5.53□□□□□ -1.52
ERCC1-216ENST00000592444 MMP17Q9ULZ9 603 aa5.53□□□□□ -1.52
ERCC1-216ENST00000592444 CLCA2Q9UQC9 943 aa5.53□□□□□ -1.52
ERCC1-216ENST00000592444 PIN4Q9Y237 131 aaKnown RBP5.53□□□□□ -1.52
ERCC1-216ENST00000592444 EXOC6BQ9Y2D4 811 aa5.53□□□□□ -1.52
ERCC1-216ENST00000592444 PCDHB2Q9Y5E7 798 aa5.53□□□□□ -1.52
ERCC1-216ENST00000592444 PCDHB1Q9Y5F3 818 aa5.53□□□□□ -1.52
ERCC1-216ENST00000592444 ZNF469Q96JG9 3925 aaPredicted RBP5.53□□□□□ -1.52
ERCC1-216ENST00000592444 COL6A5A8TX70 2615 aa5.52□□□□□ -1.53
ERCC1-216ENST00000592444 RP1L1Q8IWN7 2480 aaPredicted RBP5.52□□□□□ -1.53
ERCC1-216ENST00000592444 ARHGAP10A1A4S6 786 aa5.52□□□□□ -1.53
ERCC1-216ENST00000592444 GCOM1H8Y6P7 765 aaPredicted RBP5.52□□□□□ -1.53
ERCC1-216ENST00000592444 DDAH2O95865 285 aa5.52□□□□□ -1.53
ERCC1-216ENST00000592444 APPP05067 770 aa5.52□□□□□ -1.53
ERCC1-216ENST00000592444 POLR2MP0CAP2 368 aa5.52□□□□□ -1.53
ERCC1-216ENST00000592444 GNLYP22749 145 aa5.52□□□□□ -1.53
ERCC1-216ENST00000592444 GATA4P43694 442 aa5.52□□□□□ -1.53
ERCC1-216ENST00000592444 DGKGP49619 791 aa5.52□□□□□ -1.53
ERCC1-216ENST00000592444 GPC3P51654 580 aa5.52□□□□□ -1.53
ERCC1-216ENST00000592444 USP11P51784 963 aa5.52□□□□□ -1.53
ERCC1-216ENST00000592444 AMPD2Q01433 879 aa5.52□□□□□ -1.53
ERCC1-216ENST00000592444 CLCA4Q14CN2 919 aa5.52□□□□□ -1.53
ERCC1-216ENST00000592444 UBE3CQ15386 1083 aa5.52□□□□□ -1.53
ERCC1-216ENST00000592444 SGO2Q562F6 1265 aa5.52□□□□□ -1.53
ERCC1-216ENST00000592444 ZNF484Q5JVG2 852 aa5.52□□□□□ -1.53
ERCC1-216ENST00000592444 SYCP2LQ5T4T6 812 aa5.52□□□□□ -1.53
ERCC1-216ENST00000592444 CAPRIN2Q6IMN6 1127 aaKnown RBP5.52□□□□□ -1.53
ERCC1-216ENST00000592444 IQCEQ6IPM2 695 aa5.52□□□□□ -1.53
ERCC1-216ENST00000592444 TAOK1Q7L7X3 1001 aa5.52□□□□□ -1.53
ERCC1-216ENST00000592444 ZCCHC9Q8N567 271 aaKnown RBP5.52□□□□□ -1.53
ERCC1-216ENST00000592444 DCBLD1Q8N8Z6 715 aa5.52□□□□□ -1.53
ERCC1-216ENST00000592444 RHPN1Q8TCX5 695 aa5.52□□□□□ -1.53
ERCC1-216ENST00000592444 HASPINQ8TF76 798 aa5.52□□□□□ -1.53
ERCC1-216ENST00000592444 CD101Q93033 1021 aa5.52□□□□□ -1.53
ERCC1-216ENST00000592444 SGF29Q96ES7 293 aa5.52□□□□□ -1.53
ERCC1-216ENST00000592444 PRIMPOLQ96LW4 560 aa5.52□□□□□ -1.53
ERCC1-216ENST00000592444 ZNF512Q96ME7 567 aaPredicted RBP5.52□□□□□ -1.53
ERCC1-216ENST00000592444 CCNL2Q96S94 520 aaPredicted RBP5.52□□□□□ -1.53
ERCC1-216ENST00000592444 MMS19Q96T76 1030 aa5.52□□□□□ -1.53
ERCC1-216ENST00000592444 FAM83CQ9BQN1 747 aa5.52□□□□□ -1.53
ERCC1-216ENST00000592444 POLR3CQ9BUI4 534 aaPredicted RBP5.52□□□□□ -1.53
ERCC1-216ENST00000592444 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.52□□□□□ -1.53
ERCC1-216ENST00000592444 RWDD1Q9H446 243 aaPredicted RBP5.52□□□□□ -1.53
ERCC1-216ENST00000592444 VAT1LQ9HCJ6 419 aa5.52□□□□□ -1.53
ERCC1-216ENST00000592444 ASCL3Q9NQ33 180 aa5.52□□□□□ -1.53
ERCC1-216ENST00000592444 THSD1Q9NS62 852 aa5.52□□□□□ -1.53
ERCC1-216ENST00000592444 THG1LQ9NWX6 298 aaKnown RBP5.52□□□□□ -1.53
ERCC1-216ENST00000592444 CDY1Q9Y6F8 540 aa5.52□□□□□ -1.53
ERCC1-216ENST00000592444 COL1A2P08123 1366 aa5.52□□□□□ -1.53
ERCC1-216ENST00000592444 SF3B1O75533 1304 aaKnown RBP eCLIP5.51□□□□□ -1.53
ERCC1-216ENST00000592444 CNTNAP2Q9UHC6 1331 aa5.51□□□□□ -1.53
ERCC1-216ENST00000592444 CSPG4Q6UVK1 2322 aa5.51□□□□□ -1.53
ERCC1-216ENST00000592444 IGHV1OR15-9A0A0B4J2B8 117 aa5.51□□□□□ -1.53
ERCC1-216ENST00000592444 A0A1W2PNR3 127 aa5.51□□□□□ -1.53
ERCC1-216ENST00000592444 PRRG1O14668 218 aa5.51□□□□□ -1.53
ERCC1-216ENST00000592444 HNRNPRO43390 633 aaKnown RBP5.51□□□□□ -1.53
ERCC1-216ENST00000592444 DHX16O60231 1041 aaKnown RBP5.51□□□□□ -1.53
ERCC1-216ENST00000592444 SMARCA5O60264 1052 aaPredicted RBP5.51□□□□□ -1.53
ERCC1-216ENST00000592444 RANBP6O60518 1105 aaKnown RBP5.51□□□□□ -1.53
ERCC1-216ENST00000592444 SURF6O75683 361 aaKnown RBP5.51□□□□□ -1.53
ERCC1-216ENST00000592444 PRAMEF12O95522 483 aa5.51□□□□□ -1.53
ERCC1-216ENST00000592444 LDOC1O95751 146 aaPredicted RBP5.51□□□□□ -1.53
ERCC1-216ENST00000592444 PRKCGP05129 697 aa5.51□□□□□ -1.53
ERCC1-216ENST00000592444 SLC3A2P08195 630 aaKnown RBP5.51□□□□□ -1.53
ERCC1-216ENST00000592444 KRT7P08729 469 aa5.51□□□□□ -1.53
ERCC1-216ENST00000592444 SNHG28P0DPA3 235 aa5.51□□□□□ -1.53
ERCC1-216ENST00000592444 MAPTP10636 758 aaKnown RBP5.51□□□□□ -1.53
ERCC1-216ENST00000592444 ELF1P32519 619 aa5.51□□□□□ -1.53
ERCC1-216ENST00000592444 GJA4P35212 333 aa5.51□□□□□ -1.53
ERCC1-216ENST00000592444 SREBF1P36956 1147 aa5.51□□□□□ -1.53
ERCC1-216ENST00000592444 MCM2P49736 904 aa5.51□□□□□ -1.53
ERCC1-216ENST00000592444 ACADVLP49748 655 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms