RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 RUNX3Q13761 415 aa20.23■□□□□ 0.83
CCDC43-205ENST00000592333 SOWAHAQ2M3V2 549 aa20.23■□□□□ 0.83
CCDC43-205ENST00000592333 ATL3Q6DD88 541 aa20.23■□□□□ 0.83
CCDC43-205ENST00000592333 CC2D1AQ6P1N0 951 aaPredicted RBP20.23■□□□□ 0.83
CCDC43-205ENST00000592333 TXNDC11Q6PKC3 985 aa20.23■□□□□ 0.83
CCDC43-205ENST00000592333 VSTM1Q6UX27 236 aa20.23■□□□□ 0.83
CCDC43-205ENST00000592333 EPM2AIP1Q7L775 607 aaPredicted RBP20.23■□□□□ 0.83
CCDC43-205ENST00000592333 LONP2Q86WA8 852 aa20.23■□□□□ 0.83
CCDC43-205ENST00000592333 SPATA2LQ8IUW3 424 aaPredicted RBP20.23■□□□□ 0.83
CCDC43-205ENST00000592333 MAB21L3Q8N8X9 362 aa20.23■□□□□ 0.83
CCDC43-205ENST00000592333 USP13Q92995 863 aaPredicted RBP20.23■□□□□ 0.83
CCDC43-205ENST00000592333 ZFYVE19Q96K21 471 aa20.23■□□□□ 0.83
CCDC43-205ENST00000592333 C7orf25Q9BPX7 421 aa20.23■□□□□ 0.83
CCDC43-205ENST00000592333 MTMR12Q9C0I1 747 aa20.23■□□□□ 0.83
CCDC43-205ENST00000592333 GKN1Q9NS71 199 aa20.23■□□□□ 0.83
CCDC43-205ENST00000592333 EHD2Q9NZN4 543 aa20.23■□□□□ 0.83
CCDC43-205ENST00000592333 CGNQ9P2M7 1197 aaKnown RBP20.23■□□□□ 0.83
CCDC43-205ENST00000592333 GTF3C4Q9UKN8 822 aa20.23■□□□□ 0.83
CCDC43-205ENST00000592333 CDH9Q9ULB4 789 aa20.23■□□□□ 0.83
CCDC43-205ENST00000592333 KIF26AQ9ULI4 1882 aaPredicted RBP20.23■□□□□ 0.83
CCDC43-205ENST00000592333 DENND4CQ5VZ89 1909 aa20.23■□□□□ 0.83
CCDC43-205ENST00000592333 CCDC163A0A0D9SF12 145 aa20.22■□□□□ 0.83
CCDC43-205ENST00000592333 FOXD2O60548 495 aaPredicted RBP20.22■□□□□ 0.83
CCDC43-205ENST00000592333 ATG13O75143 517 aa20.22■□□□□ 0.83
CCDC43-205ENST00000592333 SOX9P48436 509 aa20.22■□□□□ 0.83
CCDC43-205ENST00000592333 PDE6CP51160 858 aa20.22■□□□□ 0.83
CCDC43-205ENST00000592333 PDGFRLQ15198 375 aa20.22■□□□□ 0.83
CCDC43-205ENST00000592333 KIAA1958Q8N8K9 716 aa20.22■□□□□ 0.83
CCDC43-205ENST00000592333 FSIP1Q8NA03 581 aa20.22■□□□□ 0.83
CCDC43-205ENST00000592333 HPDLQ96IR7 371 aa20.22■□□□□ 0.83
CCDC43-205ENST00000592333 HSPBP1Q9NZL4 362 aa20.22■□□□□ 0.83
CCDC43-205ENST00000592333 CEP250Q9BV73 2442 aa20.21■□□□□ 0.83
CCDC43-205ENST00000592333 K7ESF4 209 aa20.21■□□□□ 0.83
CCDC43-205ENST00000592333 TRDMT1O14717 391 aaKnown RBP20.21■□□□□ 0.83
CCDC43-205ENST00000592333 RETP07949 1114 aa20.21■□□□□ 0.83
CCDC43-205ENST00000592333 TCF3P15923 654 aa20.21■□□□□ 0.83
CCDC43-205ENST00000592333 CYP2F1P24903 491 aa20.21■□□□□ 0.83
CCDC43-205ENST00000592333 FAM160A1Q05DH4 1040 aa20.21■□□□□ 0.83
CCDC43-205ENST00000592333 PON2Q15165 354 aa20.21■□□□□ 0.83
CCDC43-205ENST00000592333 TMEM196Q5HYL7 178 aa20.21■□□□□ 0.83
CCDC43-205ENST00000592333 TXNDC8Q6A555 127 aa20.21■□□□□ 0.83
CCDC43-205ENST00000592333 GPIHBP1Q8IV16 184 aa20.21■□□□□ 0.83
CCDC43-205ENST00000592333 SPATA17Q96L03 361 aa20.21■□□□□ 0.83
CCDC43-205ENST00000592333 PVALEFA0A1B0GWK0 134 aa20.2■□□□□ 0.82
CCDC43-205ENST00000592333 USP17L7P0C7H9 530 aa20.2■□□□□ 0.82
CCDC43-205ENST00000592333 TGM1P22735 817 aa20.2■□□□□ 0.82
CCDC43-205ENST00000592333 WARSP23381 471 aaKnown RBP20.2■□□□□ 0.82
CCDC43-205ENST00000592333 HOXD13P35453 343 aa20.2■□□□□ 0.82
CCDC43-205ENST00000592333 PPP3CCP48454 512 aa20.2■□□□□ 0.82
CCDC43-205ENST00000592333 ASIC1P78348 528 aa20.2■□□□□ 0.82
CCDC43-205ENST00000592333 TNK2Q07912 1038 aa20.2■□□□□ 0.82
CCDC43-205ENST00000592333 EHHADHQ08426 723 aa20.2■□□□□ 0.82
CCDC43-205ENST00000592333 GRSF1Q12849 480 aaKnown RBP eCLIP20.2■□□□□ 0.82
CCDC43-205ENST00000592333 DDR2Q16832 855 aa20.2■□□□□ 0.82
CCDC43-205ENST00000592333 FBXO43Q4G163 708 aa20.2■□□□□ 0.82
CCDC43-205ENST00000592333 WDR44Q5JSH3 913 aa20.2■□□□□ 0.82
CCDC43-205ENST00000592333 FAM26FQ5R3K3 315 aa20.2■□□□□ 0.82
CCDC43-205ENST00000592333 UNC13DQ70J99 1090 aa20.2■□□□□ 0.82
CCDC43-205ENST00000592333 CBWD2Q8IUF1 395 aa20.2■□□□□ 0.82
CCDC43-205ENST00000592333 C12orf56Q8IXR9 622 aa20.2■□□□□ 0.82
CCDC43-205ENST00000592333 RBM12Q9NTZ6 932 aaKnown RBP20.2■□□□□ 0.82
CCDC43-205ENST00000592333 MAGEC2Q9UBF1 373 aaPredicted RBP20.2■□□□□ 0.82
CCDC43-205ENST00000592333 MAGED2Q9UNF1 606 aaPredicted RBP20.2■□□□□ 0.82
CCDC43-205ENST00000592333 DNAH14Q0VDD8 3507 aa20.19■□□□□ 0.82
CCDC43-205ENST00000592333 TACC1O75410 805 aa20.19■□□□□ 0.82
CCDC43-205ENST00000592333 ACAT1P24752 427 aaKnown RBP20.19■□□□□ 0.82
CCDC43-205ENST00000592333 SIM2Q14190 667 aaPredicted RBP20.19■□□□□ 0.82
CCDC43-205ENST00000592333 SNRNP35Q16560 246 aaKnown RBP20.19■□□□□ 0.82
CCDC43-205ENST00000592333 SHC4Q6S5L8 630 aa20.19■□□□□ 0.82
CCDC43-205ENST00000592333 HS2ST1Q7LGA3 356 aa20.19■□□□□ 0.82
CCDC43-205ENST00000592333 TRAPPC11Q7Z392 1133 aa20.19■□□□□ 0.82
CCDC43-205ENST00000592333 WDR5BQ86VZ2 330 aa20.19■□□□□ 0.82
CCDC43-205ENST00000592333 OSTM1Q86WC4 334 aa20.19■□□□□ 0.82
CCDC43-205ENST00000592333 OR5B17Q8NGF7 314 aa20.19■□□□□ 0.82
CCDC43-205ENST00000592333 NOC3LQ8WTT2 800 aaKnown RBP20.19■□□□□ 0.82
CCDC43-205ENST00000592333 KBTBD7Q8WVZ9 684 aa20.19■□□□□ 0.82
CCDC43-205ENST00000592333 DHX58Q96C10 678 aa20.19■□□□□ 0.82
CCDC43-205ENST00000592333 FNBP1Q96RU3 617 aa20.19■□□□□ 0.82
CCDC43-205ENST00000592333 SMG9Q9H0W8 520 aaKnown RBP20.19■□□□□ 0.82
CCDC43-205ENST00000592333 HPS4Q9NQG7 708 aa20.19■□□□□ 0.82
CCDC43-205ENST00000592333 AGPAT3Q9NRZ7 376 aa20.19■□□□□ 0.82
CCDC43-205ENST00000592333 TFIP11Q9UBB9 837 aaKnown RBP20.19■□□□□ 0.82
CCDC43-205ENST00000592333 CCL26Q9Y258 94 aa20.19■□□□□ 0.82
CCDC43-205ENST00000592333 TRAV19A0A0A6YYK7 116 aa20.18■□□□□ 0.82
CCDC43-205ENST00000592333 CHURC1-FNTBB4DL54 471 aa20.18■□□□□ 0.82
CCDC43-205ENST00000592333 TGFB1I1O43294 461 aa20.18■□□□□ 0.82
CCDC43-205ENST00000592333 STAU1O95793 577 aaKnown RBP20.18■□□□□ 0.82
CCDC43-205ENST00000592333 DRD1P21728 446 aa20.18■□□□□ 0.82
CCDC43-205ENST00000592333 GPR15P49685 360 aa20.18■□□□□ 0.82
CCDC43-205ENST00000592333 PSMD6Q15008 389 aa20.18■□□□□ 0.82
CCDC43-205ENST00000592333 BMT2Q1RMZ1 405 aa20.18■□□□□ 0.82
CCDC43-205ENST00000592333 RSPO4Q2I0M5 234 aaPredicted RBP20.18■□□□□ 0.82
CCDC43-205ENST00000592333 Q6ZS52 159 aa20.18■□□□□ 0.82
CCDC43-205ENST00000592333 XXYLT1Q8NBI6 393 aa20.18■□□□□ 0.82
CCDC43-205ENST00000592333 CCDC26Q8TAB7 109 aa20.18■□□□□ 0.82
CCDC43-205ENST00000592333 TMEM174Q8WUU8 243 aa20.18■□□□□ 0.82
CCDC43-205ENST00000592333 SYT15Q9BQS2 421 aa20.18■□□□□ 0.82
CCDC43-205ENST00000592333 PTPRJQ12913 1337 aa20.18■□□□□ 0.82
CCDC43-205ENST00000592333 OBSL1O75147 1896 aa20.18■□□□□ 0.82
CCDC43-205ENST00000592333 TULP1O00294 542 aaPredicted RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms