RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 CTNNA1P35221 906 aaKnown RBP12.75□□□□□ -0.37
CCBE1-203ENST00000589116 LHX1P48742 406 aa12.75□□□□□ -0.37
CCBE1-203ENST00000589116 BCAT1P54687 386 aa12.75□□□□□ -0.37
CCBE1-203ENST00000589116 SNX16P57768 344 aa12.75□□□□□ -0.37
CCBE1-203ENST00000589116 ZNF268Q14587 947 aaPredicted RBP12.75□□□□□ -0.37
CCBE1-203ENST00000589116 NAA30Q147X3 362 aaPredicted RBP12.75□□□□□ -0.37
CCBE1-203ENST00000589116 C2CD6Q53TS8 623 aa12.75□□□□□ -0.37
CCBE1-203ENST00000589116 PPP1R15BQ5SWA1 713 aa12.75□□□□□ -0.37
CCBE1-203ENST00000589116 PPP1R26Q5T8A7 1209 aaPredicted RBP12.75□□□□□ -0.37
CCBE1-203ENST00000589116 SPATA4Q8NEY3 305 aa12.75□□□□□ -0.37
CCBE1-203ENST00000589116 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.75□□□□□ -0.37
CCBE1-203ENST00000589116 STK32AQ8WU08 396 aa12.75□□□□□ -0.37
CCBE1-203ENST00000589116 RSPH1Q8WYR4 309 aa12.75□□□□□ -0.37
CCBE1-203ENST00000589116 ANKRD7Q92527 254 aa12.75□□□□□ -0.37
CCBE1-203ENST00000589116 TSC1Q92574 1164 aa12.75□□□□□ -0.37
CCBE1-203ENST00000589116 CPXM1Q96SM3 734 aa12.75□□□□□ -0.37
CCBE1-203ENST00000589116 SYNCQ9H7C4 482 aa12.75□□□□□ -0.37
CCBE1-203ENST00000589116 IP6K2Q9UHH9 426 aa12.75□□□□□ -0.37
CCBE1-203ENST00000589116 CYTH4Q9UIA0 394 aa12.75□□□□□ -0.37
CCBE1-203ENST00000589116 INPP5FQ9Y2H2 1132 aa12.75□□□□□ -0.37
CCBE1-203ENST00000589116 TMEM191CA6NGB0 347 aa12.74□□□□□ -0.37
CCBE1-203ENST00000589116 GPNMBQ14956 572 aa12.74□□□□□ -0.37
CCBE1-203ENST00000589116 PTPROQ16827 1216 aa12.74□□□□□ -0.37
CCBE1-203ENST00000589116 LLGL2Q6P1M3 1020 aa12.74□□□□□ -0.37
CCBE1-203ENST00000589116 DCUN1D2Q6PH85 259 aa12.74□□□□□ -0.37
CCBE1-203ENST00000589116 DSTYKQ6XUX3 929 aa12.74□□□□□ -0.37
CCBE1-203ENST00000589116 MMGT1Q8N4V1 131 aa12.74□□□□□ -0.37
CCBE1-203ENST00000589116 C12orf29Q8N999 325 aa12.74□□□□□ -0.37
CCBE1-203ENST00000589116 C3orf58Q8NDZ4 430 aa12.74□□□□□ -0.37
CCBE1-203ENST00000589116 DBF4BQ8NFT6 615 aa12.74□□□□□ -0.37
CCBE1-203ENST00000589116 BTBD6Q96KE9 485 aa12.74□□□□□ -0.37
CCBE1-203ENST00000589116 NAP1L3Q99457 506 aaPredicted RBP12.74□□□□□ -0.37
CCBE1-203ENST00000589116 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.74□□□□□ -0.37
CCBE1-203ENST00000589116 HIPK3Q9H422 1215 aa12.74□□□□□ -0.37
CCBE1-203ENST00000589116 DPEP3Q9H4B8 488 aa12.74□□□□□ -0.37
CCBE1-203ENST00000589116 CYLDQ9NQC7 956 aa12.74□□□□□ -0.37
CCBE1-203ENST00000589116 RNF216Q9NWF9 866 aaPredicted RBP12.74□□□□□ -0.37
CCBE1-203ENST00000589116 SIGLEC16A6NMB1 481 aa12.73□□□□□ -0.37
CCBE1-203ENST00000589116 CEP104O60308 925 aa12.73□□□□□ -0.37
CCBE1-203ENST00000589116 CXCL10P02778 98 aa12.73□□□□□ -0.37
CCBE1-203ENST00000589116 TUBBP07437 444 aa12.73□□□□□ -0.37
CCBE1-203ENST00000589116 PFKMP08237 780 aa12.73□□□□□ -0.37
CCBE1-203ENST00000589116 ODC1P11926 461 aa12.73□□□□□ -0.37
CCBE1-203ENST00000589116 LMO2P25791 158 aa12.73□□□□□ -0.37
CCBE1-203ENST00000589116 ATN1P54259 1190 aaPredicted RBP12.73□□□□□ -0.37
CCBE1-203ENST00000589116 PSMC1P62191 440 aaKnown RBP12.73□□□□□ -0.37
CCBE1-203ENST00000589116 DSC1Q08554 894 aa12.73□□□□□ -0.37
CCBE1-203ENST00000589116 FAAP100Q0VG06 881 aa12.73□□□□□ -0.37
CCBE1-203ENST00000589116 BST2Q10589 180 aaKnown RBP12.73□□□□□ -0.37
CCBE1-203ENST00000589116 NOMO2Q5JPE7 1267 aa12.73□□□□□ -0.37
CCBE1-203ENST00000589116 CLLU1OSQ5K130 101 aa12.73□□□□□ -0.37
CCBE1-203ENST00000589116 WSCD1Q658N2 575 aa12.73□□□□□ -0.37
CCBE1-203ENST00000589116 CCDC70Q6NSX1 233 aa12.73□□□□□ -0.37
CCBE1-203ENST00000589116 OSTM1Q86WC4 334 aa12.73□□□□□ -0.37
CCBE1-203ENST00000589116 TTC30AQ86WT1 665 aa12.73□□□□□ -0.37
CCBE1-203ENST00000589116 XYLT1Q86Y38 959 aa12.73□□□□□ -0.37
CCBE1-203ENST00000589116 NIPA2Q8N8Q9 360 aa12.73□□□□□ -0.37
CCBE1-203ENST00000589116 ANKRD52Q8NB46 1076 aa12.73□□□□□ -0.37
CCBE1-203ENST00000589116 NOA1Q8NC60 698 aaKnown RBP12.73□□□□□ -0.37
CCBE1-203ENST00000589116 B3GALNT2Q8NCR0 500 aa12.73□□□□□ -0.37
CCBE1-203ENST00000589116 FNIP1Q8TF40 1166 aa12.73□□□□□ -0.37
CCBE1-203ENST00000589116 MCRS1Q96EZ8 462 aa12.73□□□□□ -0.37
CCBE1-203ENST00000589116 MS4A14Q96JA4 679 aa12.73□□□□□ -0.37
CCBE1-203ENST00000589116 MCEEQ96PE7 176 aa12.73□□□□□ -0.37
CCBE1-203ENST00000589116 PLVAPQ9BX97 442 aa12.73□□□□□ -0.37
CCBE1-203ENST00000589116 UBE2OQ9C0C9 1292 aaKnown RBP12.73□□□□□ -0.37
CCBE1-203ENST00000589116 FAM49BQ9NUQ9 324 aa12.73□□□□□ -0.37
CCBE1-203ENST00000589116 DSEQ9UL01 958 aa12.73□□□□□ -0.37
CCBE1-203ENST00000589116 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.73□□□□□ -0.37
CCBE1-203ENST00000589116 PCDHA3Q9Y5H8 950 aa12.73□□□□□ -0.37
CCBE1-203ENST00000589116 TMEM189-UBE2V1I3L0A0 370 aa12.73□□□□□ -0.37
CCBE1-203ENST00000589116 ENPP3O14638 875 aa12.73□□□□□ -0.37
CCBE1-203ENST00000589116 HOXA2O43364 376 aa12.73□□□□□ -0.37
CCBE1-203ENST00000589116 PSTPIP1O43586 416 aa12.73□□□□□ -0.37
CCBE1-203ENST00000589116 B3GAT3O94766 335 aa12.73□□□□□ -0.37
CCBE1-203ENST00000589116 ERBB2P04626 1255 aa12.73□□□□□ -0.37
CCBE1-203ENST00000589116 CYP11A1P05108 521 aa12.73□□□□□ -0.37
CCBE1-203ENST00000589116 PDGFRBP09619 1106 aa12.73□□□□□ -0.37
CCBE1-203ENST00000589116 IBSPP21815 317 aaPredicted RBP12.73□□□□□ -0.37
CCBE1-203ENST00000589116 PEX5P50542 639 aa12.73□□□□□ -0.37
CCBE1-203ENST00000589116 RWDD2BP57060 319 aa12.73□□□□□ -0.37
CCBE1-203ENST00000589116 PIGHQ14442 188 aaPredicted RBP12.73□□□□□ -0.37
CCBE1-203ENST00000589116 TRIM60Q495X7 471 aa12.73□□□□□ -0.37
CCBE1-203ENST00000589116 CYP4A22Q5TCH4 519 aa12.73□□□□□ -0.37
CCBE1-203ENST00000589116 DCAF12L1Q5VU92 463 aa12.73□□□□□ -0.37
CCBE1-203ENST00000589116 DCLRE1AQ6PJP8 1040 aa12.73□□□□□ -0.37
CCBE1-203ENST00000589116 NECAB2Q7Z6G3 386 aa12.73□□□□□ -0.37
CCBE1-203ENST00000589116 PHLDB2Q86SQ0 1253 aa12.73□□□□□ -0.37
CCBE1-203ENST00000589116 UBA3Q8TBC4 463 aa12.73□□□□□ -0.37
CCBE1-203ENST00000589116 SLC35F5Q8WV83 523 aa12.73□□□□□ -0.37
CCBE1-203ENST00000589116 ALG3Q92685 438 aa12.73□□□□□ -0.37
CCBE1-203ENST00000589116 KRT35Q92764 455 aa12.73□□□□□ -0.37
CCBE1-203ENST00000589116 PAWRQ96IZ0 340 aaKnown RBP12.73□□□□□ -0.37
CCBE1-203ENST00000589116 RNPC3Q96LT9 517 aaKnown RBP12.73□□□□□ -0.37
CCBE1-203ENST00000589116 SLC4A5Q9BY07 1137 aa12.73□□□□□ -0.37
CCBE1-203ENST00000589116 TRIM7Q9C029 511 aa12.73□□□□□ -0.37
CCBE1-203ENST00000589116 CACNG4Q9UBN1 327 aa12.73□□□□□ -0.37
CCBE1-203ENST00000589116 SCN5AQ14524 2016 aa12.72□□□□□ -0.37
CCBE1-203ENST00000589116 CCDC188H7C350 402 aa12.72□□□□□ -0.37
CCBE1-203ENST00000589116 M0QZQ0 153 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms