RNA–Protein interactions for RNA: ENST00000585953.5

RPRD1A-204, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 3

Gene RPRD1A, Length 2,357 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-204ENST00000585953 VRK3Q8IV63 474 aa3.04□□□□□ -1.92
RPRD1A-204ENST00000585953 LNX2Q8N448 690 aa3.04□□□□□ -1.92
RPRD1A-204ENST00000585953 MOGAT1Q96PD6 335 aa3.04□□□□□ -1.92
RPRD1A-204ENST00000585953 OSBPL9Q96SU4 736 aa3.04□□□□□ -1.92
RPRD1A-204ENST00000585953 MESP1Q9BRJ9 268 aa3.04□□□□□ -1.92
RPRD1A-204ENST00000585953 NAA15Q9BXJ9 866 aaKnown RBP3.04□□□□□ -1.92
RPRD1A-204ENST00000585953 MS4A7Q9GZW8 240 aaPredicted RBP3.04□□□□□ -1.92
RPRD1A-204ENST00000585953 A1CFQ9NQ94 594 aaKnown RBP3.04□□□□□ -1.92
RPRD1A-204ENST00000585953 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.04□□□□□ -1.92
RPRD1A-204ENST00000585953 SNX13Q9Y5W8 968 aa3.04□□□□□ -1.92
RPRD1A-204ENST00000585953 CDK12Q9NYV4 1490 aaPredicted RBP3.03□□□□□ -1.92
RPRD1A-204ENST00000585953 CCDC194A0A1B0GVG4 234 aa3.03□□□□□ -1.92
RPRD1A-204ENST00000585953 GRID2IPA4D2P6 1211 aa3.03□□□□□ -1.92
RPRD1A-204ENST00000585953 MBD3L4A6NDZ8 208 aaPredicted RBP3.03□□□□□ -1.92
RPRD1A-204ENST00000585953 MBD3L3A6NE82 208 aaPredicted RBP3.03□□□□□ -1.92
RPRD1A-204ENST00000585953 RHPN2P1A8MT19 583 aa3.03□□□□□ -1.92
RPRD1A-204ENST00000585953 F5H697 171 aa3.03□□□□□ -1.92
RPRD1A-204ENST00000585953 F8W8V4 182 aa3.03□□□□□ -1.92
RPRD1A-204ENST00000585953 PYCARD-AS1I3L0S3 204 aa3.03□□□□□ -1.92
RPRD1A-204ENST00000585953 NBPF7P0C2Y1 421 aaPredicted RBP3.03□□□□□ -1.92
RPRD1A-204ENST00000585953 SRGNP10124 158 aa3.03□□□□□ -1.92
RPRD1A-204ENST00000585953 CYP2C9P11712 490 aa3.03□□□□□ -1.92
RPRD1A-204ENST00000585953 PPP3CBP16298 524 aa3.03□□□□□ -1.92
RPRD1A-204ENST00000585953 KLRC1P26715 233 aa3.03□□□□□ -1.92
RPRD1A-204ENST00000585953 PXNP49023 591 aaPredicted RBP3.03□□□□□ -1.92
RPRD1A-204ENST00000585953 BLOC1S1P78537 153 aa3.03□□□□□ -1.92
RPRD1A-204ENST00000585953 SF3B3Q15393 1217 aaKnown RBP3.03□□□□□ -1.92
RPRD1A-204ENST00000585953 VPS53Q5VIR6 699 aa3.03□□□□□ -1.92
RPRD1A-204ENST00000585953 IL31Q6EBC2 164 aa3.03□□□□□ -1.92
RPRD1A-204ENST00000585953 LAYNQ6UX15 382 aa3.03□□□□□ -1.92
RPRD1A-204ENST00000585953 GAS2L3Q86XJ1 694 aa3.03□□□□□ -1.92
RPRD1A-204ENST00000585953 FAM109AQ8N4B1 249 aa3.03□□□□□ -1.92
RPRD1A-204ENST00000585953 SLC30A5Q8TAD4 765 aa3.03□□□□□ -1.92
RPRD1A-204ENST00000585953 NEU4Q8WWR8 484 aaPredicted RBP3.03□□□□□ -1.92
RPRD1A-204ENST00000585953 LPIN2Q92539 896 aa3.03□□□□□ -1.92
RPRD1A-204ENST00000585953 Q96MF0 132 aa3.03□□□□□ -1.92
RPRD1A-204ENST00000585953 PCED1AQ9H1Q7 454 aa3.03□□□□□ -1.92
RPRD1A-204ENST00000585953 SYBUQ9NX95 663 aa3.03□□□□□ -1.92
RPRD1A-204ENST00000585953 SHOC2Q9UQ13 582 aa3.03□□□□□ -1.92
RPRD1A-204ENST00000585953 SCRIBQ14160 1630 aa3.03□□□□□ -1.92
RPRD1A-204ENST00000585953 TEX14Q8IWB6 1497 aa3.03□□□□□ -1.92
RPRD1A-204ENST00000585953 ATAD2BQ9ULI0 1458 aa3.03□□□□□ -1.92
RPRD1A-204ENST00000585953 FOXN3O00409 490 aaPredicted RBP3.03□□□□□ -1.92
RPRD1A-204ENST00000585953 KPNA5O15131 536 aa3.03□□□□□ -1.92
RPRD1A-204ENST00000585953 PROM1O43490 865 aa3.03□□□□□ -1.92
RPRD1A-204ENST00000585953 TRIAP1O43715 76 aa3.03□□□□□ -1.92
RPRD1A-204ENST00000585953 MYL3P08590 195 aa3.03□□□□□ -1.92
RPRD1A-204ENST00000585953 XRCC6P12956 609 aaKnown RBP eCLIP3.03□□□□□ -1.92
RPRD1A-204ENST00000585953 IL1R1P14778 569 aa3.03□□□□□ -1.92
RPRD1A-204ENST00000585953 KRT4P19013 534 aa3.03□□□□□ -1.92
RPRD1A-204ENST00000585953 TGM1P22735 817 aa3.03□□□□□ -1.92
RPRD1A-204ENST00000585953 CD6P30203 668 aa3.03□□□□□ -1.92
RPRD1A-204ENST00000585953 PRIM2P49643 509 aa3.03□□□□□ -1.92
RPRD1A-204ENST00000585953 PICALMQ13492 652 aa3.03□□□□□ -1.92
RPRD1A-204ENST00000585953 C11orf96Q7Z7L8 435 aa3.03□□□□□ -1.92
RPRD1A-204ENST00000585953 ZNF280BQ86YH2 543 aa3.03□□□□□ -1.92
RPRD1A-204ENST00000585953 ULK2Q8IYT8 1036 aa3.03□□□□□ -1.92
RPRD1A-204ENST00000585953 LCORLQ8N3X6 602 aa3.03□□□□□ -1.92
RPRD1A-204ENST00000585953 RAPGEF4Q8WZA2 1011 aa3.03□□□□□ -1.92
RPRD1A-204ENST00000585953 STRBPQ96SI9 672 aaKnown RBP3.03□□□□□ -1.92
RPRD1A-204ENST00000585953 UNKQ9C0B0 810 aaKnown RBP3.03□□□□□ -1.92
RPRD1A-204ENST00000585953 CASS4Q9NQ75 786 aa3.03□□□□□ -1.92
RPRD1A-204ENST00000585953 CHST12Q9NRB3 414 aa3.03□□□□□ -1.92
RPRD1A-204ENST00000585953 KCTD5Q9NXV2 234 aa3.03□□□□□ -1.92
RPRD1A-204ENST00000585953 PEG3Q9GZU2 1588 aa3.02□□□□□ -1.93
RPRD1A-204ENST00000585953 COL4A3Q01955 1670 aa3.02□□□□□ -1.93
RPRD1A-204ENST00000585953 PLIN1O60240 522 aa3.02□□□□□ -1.93
RPRD1A-204ENST00000585953 HKR1P10072 659 aa3.02□□□□□ -1.93
RPRD1A-204ENST00000585953 PPIFP30405 207 aaKnown RBP3.02□□□□□ -1.93
RPRD1A-204ENST00000585953 TM4SF4P48230 202 aa3.02□□□□□ -1.93
RPRD1A-204ENST00000585953 CASP5P51878 434 aa3.02□□□□□ -1.93
RPRD1A-204ENST00000585953 NEK3P51956 506 aa3.02□□□□□ -1.93
RPRD1A-204ENST00000585953 HNRNPMP52272 730 aaKnown RBP eCLIP3.02□□□□□ -1.93
RPRD1A-204ENST00000585953 ZNF543Q08ER8 600 aa3.02□□□□□ -1.93
RPRD1A-204ENST00000585953 IFIT5Q13325 482 aaKnown RBP3.02□□□□□ -1.93
RPRD1A-204ENST00000585953 DAG1Q14118 895 aa3.02□□□□□ -1.93
RPRD1A-204ENST00000585953 ZIK1Q3SY52 487 aaPredicted RBP3.02□□□□□ -1.93
RPRD1A-204ENST00000585953 PLA1AQ53H76 456 aa3.02□□□□□ -1.93
RPRD1A-204ENST00000585953 VWA1Q6PCB0 445 aa3.02□□□□□ -1.93
RPRD1A-204ENST00000585953 SLC44A3Q8N4M1 653 aa3.02□□□□□ -1.93
RPRD1A-204ENST00000585953 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.02□□□□□ -1.93
RPRD1A-204ENST00000585953 BEND2Q8NDZ0 799 aa3.02□□□□□ -1.93
RPRD1A-204ENST00000585953 MYCBPAPQ8TBZ2 947 aa3.02□□□□□ -1.93
RPRD1A-204ENST00000585953 LINC00476Q8WZB0 136 aa3.02□□□□□ -1.93
RPRD1A-204ENST00000585953 SPSB4Q96A44 273 aa3.02□□□□□ -1.93
RPRD1A-204ENST00000585953 COQ10AQ96MF6 247 aa3.02□□□□□ -1.93
RPRD1A-204ENST00000585953 TBCBQ99426 244 aa3.02□□□□□ -1.93
RPRD1A-204ENST00000585953 AIFM2Q9BRQ8 373 aa3.02□□□□□ -1.93
RPRD1A-204ENST00000585953 PTDSS2Q9BVG9 487 aa3.02□□□□□ -1.93
RPRD1A-204ENST00000585953 PNPLA8Q9NP80 782 aa3.02□□□□□ -1.93
RPRD1A-204ENST00000585953 PHTF1Q9UMS5 762 aa3.02□□□□□ -1.93
RPRD1A-204ENST00000585953 TBC1D30Q9Y2I9 924 aa3.02□□□□□ -1.93
RPRD1A-204ENST00000585953 PREX1Q8TCU6 1659 aa3.02□□□□□ -1.93
RPRD1A-204ENST00000585953 hCG_1984214I3L0E3 225 aa3.02□□□□□ -1.93
RPRD1A-204ENST00000585953 IL18RAPO95256 599 aa3.02□□□□□ -1.93
RPRD1A-204ENST00000585953 TSHRP16473 764 aa3.02□□□□□ -1.93
RPRD1A-204ENST00000585953 LRPAP1P30533 357 aa3.02□□□□□ -1.93
RPRD1A-204ENST00000585953 AVPR1BP47901 424 aa3.02□□□□□ -1.93
RPRD1A-204ENST00000585953 PRELPP51888 382 aa3.02□□□□□ -1.93
RPRD1A-204ENST00000585953 HTRA4P83105 476 aaPredicted RBP3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms