RNA–Protein interactions for RNA: ENST00000582475.1

SNRPD1-204, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

TSL 3 BASIC

Gene SNRPD1, Length 723 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-204ENST00000582475 MTCL1Q9Y4B5 1905 aaKnown RBP12.84□□□□□ -0.35
SNRPD1-204ENST00000582475 SPTBN5Q9NRC6 3674 aaKnown RBP12.83□□□□□ -0.36
SNRPD1-204ENST00000582475 GOLGA6L19H0YKK7 550 aa12.83□□□□□ -0.36
SNRPD1-204ENST00000582475 CILPO75339 1184 aa12.83□□□□□ -0.36
SNRPD1-204ENST00000582475 HNRNPA1P09651 372 aaKnown RBP eCLIP12.83□□□□□ -0.36
SNRPD1-204ENST00000582475 HAPLN1P10915 354 aaPredicted RBP12.83□□□□□ -0.36
SNRPD1-204ENST00000582475 ATP1A3P13637 1013 aa12.83□□□□□ -0.36
SNRPD1-204ENST00000582475 ZNF445P59923 1031 aa12.83□□□□□ -0.36
SNRPD1-204ENST00000582475 YWHAEP62258 255 aaKnown RBP12.83□□□□□ -0.36
SNRPD1-204ENST00000582475 ITIH3Q06033 890 aa12.83□□□□□ -0.36
SNRPD1-204ENST00000582475 INCA1Q0VD86 236 aa12.83□□□□□ -0.36
SNRPD1-204ENST00000582475 AAK1Q2M2I8 961 aa12.83□□□□□ -0.36
SNRPD1-204ENST00000582475 PUS10Q3MIT2 529 aaKnown RBP12.83□□□□□ -0.36
SNRPD1-204ENST00000582475 MGAT5BQ3V5L5 792 aa12.83□□□□□ -0.36
SNRPD1-204ENST00000582475 MDH1BQ5I0G3 518 aa12.83□□□□□ -0.36
SNRPD1-204ENST00000582475 ATAT1Q5SQI0 421 aa12.83□□□□□ -0.36
SNRPD1-204ENST00000582475 FKBP15Q5T1M5 1219 aa12.83□□□□□ -0.36
SNRPD1-204ENST00000582475 CYP26C1Q6V0L0 522 aa12.83□□□□□ -0.36
SNRPD1-204ENST00000582475 C4orf50Q6ZRC1 276 aa12.83□□□□□ -0.36
SNRPD1-204ENST00000582475 GPR149Q86SP6 731 aa12.83□□□□□ -0.36
SNRPD1-204ENST00000582475 ACOT1Q86TX2 421 aa12.83□□□□□ -0.36
SNRPD1-204ENST00000582475 SPATA2LQ8IUW3 424 aaPredicted RBP12.83□□□□□ -0.36
SNRPD1-204ENST00000582475 ARHGEF19Q8IW93 802 aa12.83□□□□□ -0.36
SNRPD1-204ENST00000582475 B3GALNT2Q8NCR0 500 aa12.83□□□□□ -0.36
SNRPD1-204ENST00000582475 WHAMMQ8TF30 809 aa12.83□□□□□ -0.36
SNRPD1-204ENST00000582475 ATXN2LQ8WWM7 1075 aaKnown RBP12.83□□□□□ -0.36
SNRPD1-204ENST00000582475 TWNKQ96RR1 684 aa12.83□□□□□ -0.36
SNRPD1-204ENST00000582475 ARID3AQ99856 593 aa12.83□□□□□ -0.36
SNRPD1-204ENST00000582475 DNAI2Q9GZS0 605 aa12.83□□□□□ -0.36
SNRPD1-204ENST00000582475 CRISPLD1Q9H336 500 aa12.83□□□□□ -0.36
SNRPD1-204ENST00000582475 FAM124BQ9H5Z6 455 aaPredicted RBP12.83□□□□□ -0.36
SNRPD1-204ENST00000582475 UBE2TQ9NPD8 197 aaPredicted RBP12.83□□□□□ -0.36
SNRPD1-204ENST00000582475 ABI2Q9NYB9 513 aaPredicted RBP12.83□□□□□ -0.36
SNRPD1-204ENST00000582475 HSFX1Q9UBD0 423 aa12.83□□□□□ -0.36
SNRPD1-204ENST00000582475 BRWD1Q9NSI6 2320 aa12.83□□□□□ -0.36
SNRPD1-204ENST00000582475 CCL16O15467 120 aa12.82□□□□□ -0.36
SNRPD1-204ENST00000582475 MBTPS2O43462 519 aa12.82□□□□□ -0.36
SNRPD1-204ENST00000582475 PAPLNO95428 1278 aa12.82□□□□□ -0.36
SNRPD1-204ENST00000582475 LRG1P02750 347 aa12.82□□□□□ -0.36
SNRPD1-204ENST00000582475 TRIM21P19474 475 aaKnown RBP12.82□□□□□ -0.36
SNRPD1-204ENST00000582475 CYP2F1P24903 491 aa12.82□□□□□ -0.36
SNRPD1-204ENST00000582475 HOXA9P31269 272 aa12.82□□□□□ -0.36
SNRPD1-204ENST00000582475 ALDH1A3P47895 512 aa12.82□□□□□ -0.36
SNRPD1-204ENST00000582475 MRPS5P82675 430 aaKnown RBP12.82□□□□□ -0.36
SNRPD1-204ENST00000582475 CYP27A1Q02318 531 aa12.82□□□□□ -0.36
SNRPD1-204ENST00000582475 GCNT1Q02742 428 aa12.82□□□□□ -0.36
SNRPD1-204ENST00000582475 TWF1Q12792 350 aa12.82□□□□□ -0.36
SNRPD1-204ENST00000582475 ORC1Q13415 861 aa12.82□□□□□ -0.36
SNRPD1-204ENST00000582475 SMAD4Q13485 552 aaKnown RBP12.82□□□□□ -0.36
SNRPD1-204ENST00000582475 CCDC142Q17RM4 750 aa12.82□□□□□ -0.36
SNRPD1-204ENST00000582475 ZNF394Q53GI3 561 aa12.82□□□□□ -0.36
SNRPD1-204ENST00000582475 TRIM65Q6PJ69 517 aa12.82□□□□□ -0.36
SNRPD1-204ENST00000582475 APTXQ7Z2E3 356 aaKnown RBP12.82□□□□□ -0.36
SNRPD1-204ENST00000582475 SMRP1Q8NCR6 262 aa12.82□□□□□ -0.36
SNRPD1-204ENST00000582475 FEZF2Q8TBJ5 459 aa12.82□□□□□ -0.36
SNRPD1-204ENST00000582475 KAT5Q92993 513 aa12.82□□□□□ -0.36
SNRPD1-204ENST00000582475 MYLPFQ96A32 169 aa12.82□□□□□ -0.36
SNRPD1-204ENST00000582475 ZNF707Q96C28 371 aaPredicted RBP12.82□□□□□ -0.36
SNRPD1-204ENST00000582475 PCED1BQ96HM7 432 aa12.82□□□□□ -0.36
SNRPD1-204ENST00000582475 TMEM176AQ96HP8 235 aa12.82□□□□□ -0.36
SNRPD1-204ENST00000582475 FUBP3Q96I24 572 aaKnown RBP eCLIP12.82□□□□□ -0.362e-10■□□□□ 10
SNRPD1-204ENST00000582475 FAM81BQ96LP2 452 aa12.82□□□□□ -0.36
SNRPD1-204ENST00000582475 HEXIM2Q96MH2 286 aaKnown RBP12.82□□□□□ -0.36
SNRPD1-204ENST00000582475 B3GNT5Q9BYG0 378 aa12.82□□□□□ -0.36
SNRPD1-204ENST00000582475 ELOVL4Q9GZR5 314 aa12.82□□□□□ -0.36
SNRPD1-204ENST00000582475 PIDD1Q9HB75 910 aa12.82□□□□□ -0.36
SNRPD1-204ENST00000582475 HMGXB4Q9UGU5 601 aa12.82□□□□□ -0.36
SNRPD1-204ENST00000582475 PCDHB4Q9Y5E5 795 aa12.82□□□□□ -0.36
SNRPD1-204ENST00000582475 INSL5Q9Y5Q6 135 aa12.82□□□□□ -0.36
SNRPD1-204ENST00000582475 COL6A3P12111 3177 aa12.82□□□□□ -0.36
SNRPD1-204ENST00000582475 EYSQ5T1H1 3165 aa12.82□□□□□ -0.36
SNRPD1-204ENST00000582475 PLXNA3P51805 1871 aa12.82□□□□□ -0.36
SNRPD1-204ENST00000582475 PRUNE2Q8WUY3 3088 aa12.81□□□□□ -0.36
SNRPD1-204ENST00000582475 REV3LO60673 3130 aa12.81□□□□□ -0.36
SNRPD1-204ENST00000582475 GRXCR2A6NFK2 248 aa12.81□□□□□ -0.36
SNRPD1-204ENST00000582475 XYLBO75191 536 aa12.81□□□□□ -0.36
SNRPD1-204ENST00000582475 BDNFP23560 247 aa12.81□□□□□ -0.36
SNRPD1-204ENST00000582475 MTHFRP42898 656 aa12.81□□□□□ -0.36
SNRPD1-204ENST00000582475 RAD23BP54727 409 aa12.81□□□□□ -0.36
SNRPD1-204ENST00000582475 EPHB3P54753 998 aa12.81□□□□□ -0.36
SNRPD1-204ENST00000582475 MFAP3P55082 362 aa12.81□□□□□ -0.36
SNRPD1-204ENST00000582475 APBA1Q02410 837 aa12.81□□□□□ -0.36
SNRPD1-204ENST00000582475 UBXN1Q04323 297 aa12.81□□□□□ -0.36
SNRPD1-204ENST00000582475 PLD1Q13393 1074 aa12.81□□□□□ -0.36
SNRPD1-204ENST00000582475 CFAP221Q4G0U5 840 aa12.81□□□□□ -0.36
SNRPD1-204ENST00000582475 FILIP1LQ4L180 1135 aa12.81□□□□□ -0.36
SNRPD1-204ENST00000582475 PTCRAQ6ISU1 281 aaPredicted RBP12.81□□□□□ -0.36
SNRPD1-204ENST00000582475 DPY19L2P1Q6NXN4 242 aa12.81□□□□□ -0.36
SNRPD1-204ENST00000582475 GJB7Q6PEY0 223 aa12.81□□□□□ -0.36
SNRPD1-204ENST00000582475 ENOSF1Q7L5Y1 443 aa12.81□□□□□ -0.36
SNRPD1-204ENST00000582475 TTC9BQ8N6N2 239 aa12.81□□□□□ -0.36
SNRPD1-204ENST00000582475 UBR7Q8N806 425 aa12.81□□□□□ -0.36
SNRPD1-204ENST00000582475 C12orf29Q8N999 325 aa12.81□□□□□ -0.36
SNRPD1-204ENST00000582475 SUSD6Q92537 303 aa12.81□□□□□ -0.36
SNRPD1-204ENST00000582475 SMG7Q92540 1137 aaKnown RBP12.81□□□□□ -0.36
SNRPD1-204ENST00000582475 JAKMIP2Q96AA8 810 aa12.81□□□□□ -0.36
SNRPD1-204ENST00000582475 ZNF512Q96ME7 567 aaPredicted RBP12.81□□□□□ -0.36
SNRPD1-204ENST00000582475 RIPOR3Q96MK2 946 aa12.81□□□□□ -0.36
SNRPD1-204ENST00000582475 KREMEN1Q96MU8 473 aa12.81□□□□□ -0.36
SNRPD1-204ENST00000582475 SEPT5Q99719 369 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms