RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 MAPK8P45983 427 aa10.91□□□□□ -0.66
NPLOC4-220ENST00000576940 IFNAR2P48551 515 aa10.91□□□□□ -0.66
NPLOC4-220ENST00000576940 ACOT2P49753 483 aa10.91□□□□□ -0.66
NPLOC4-220ENST00000576940 FAM160A1Q05DH4 1040 aa10.91□□□□□ -0.66
NPLOC4-220ENST00000576940 ZNF268Q14587 947 aaPredicted RBP10.91□□□□□ -0.66
NPLOC4-220ENST00000576940 TMEM132DQ14C87 1099 aa10.91□□□□□ -0.66
NPLOC4-220ENST00000576940 ZNF77Q15935 545 aa10.91□□□□□ -0.66
NPLOC4-220ENST00000576940 KYAT1Q16773 422 aa10.91□□□□□ -0.66
NPLOC4-220ENST00000576940 ZC2HC1CQ53FD0 456 aaPredicted RBP10.91□□□□□ -0.66
NPLOC4-220ENST00000576940 TRIM61Q5EBN2 209 aa10.91□□□□□ -0.66
NPLOC4-220ENST00000576940 SLC39A4Q6P5W5 647 aa10.91□□□□□ -0.66
NPLOC4-220ENST00000576940 ARMCX6Q7L4S7 300 aa10.91□□□□□ -0.66
NPLOC4-220ENST00000576940 RASSF3Q86WH2 238 aa10.91□□□□□ -0.66
NPLOC4-220ENST00000576940 CD302Q8IX05 232 aa10.91□□□□□ -0.66
NPLOC4-220ENST00000576940 EFCAB13Q8IY85 973 aa10.91□□□□□ -0.66
NPLOC4-220ENST00000576940 DCP1BQ8IZD4 617 aaKnown RBP10.91□□□□□ -0.66
NPLOC4-220ENST00000576940 MDGA1Q8NFP4 955 aa10.91□□□□□ -0.66
NPLOC4-220ENST00000576940 USP33Q8TEY7 942 aa10.91□□□□□ -0.66
NPLOC4-220ENST00000576940 EXOC4Q96A65 974 aa10.91□□□□□ -0.66
NPLOC4-220ENST00000576940 ACDQ96AP0 544 aa10.91□□□□□ -0.66
NPLOC4-220ENST00000576940 TSPAN18Q96SJ8 248 aa10.91□□□□□ -0.66
NPLOC4-220ENST00000576940 MSTO1Q9BUK6 570 aa10.91□□□□□ -0.66
NPLOC4-220ENST00000576940 DPP3Q9NY33 737 aa10.91□□□□□ -0.66
NPLOC4-220ENST00000576940 PCDHB5Q9Y5E4 795 aa10.91□□□□□ -0.66
NPLOC4-220ENST00000576940 PKD1L2Q7Z442 2459 aa10.91□□□□□ -0.66
NPLOC4-220ENST00000576940 DSPP15924 2871 aaKnown RBP10.9□□□□□ -0.66
NPLOC4-220ENST00000576940 ANKRD11Q6UB99 2663 aaPredicted RBP10.9□□□□□ -0.66
NPLOC4-220ENST00000576940 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.9□□□□□ -0.66
NPLOC4-220ENST00000576940 SOBPA7XYQ1 873 aa10.9□□□□□ -0.66
NPLOC4-220ENST00000576940 KPNA7A9QM74 516 aa10.9□□□□□ -0.66
NPLOC4-220ENST00000576940 TISP43B9A030 160 aa10.9□□□□□ -0.66
NPLOC4-220ENST00000576940 ANKRD63C9JTQ0 380 aa10.9□□□□□ -0.66
NPLOC4-220ENST00000576940 TULP1O00294 542 aaPredicted RBP10.9□□□□□ -0.66
NPLOC4-220ENST00000576940 CSH1P0DML2 217 aa10.9□□□□□ -0.66
NPLOC4-220ENST00000576940 CSH2P0DML3 217 aa10.9□□□□□ -0.66
NPLOC4-220ENST00000576940 PAX3P23760 479 aa10.9□□□□□ -0.66
NPLOC4-220ENST00000576940 OPRD1P41143 372 aa10.9□□□□□ -0.66
NPLOC4-220ENST00000576940 PTGER3P43115 390 aa10.9□□□□□ -0.66
NPLOC4-220ENST00000576940 TAF6P49848 677 aa10.9□□□□□ -0.66
NPLOC4-220ENST00000576940 SMARCB1Q12824 385 aa10.9□□□□□ -0.66
NPLOC4-220ENST00000576940 DHX8Q14562 1220 aaKnown RBP10.9□□□□□ -0.66
NPLOC4-220ENST00000576940 CRY1Q16526 586 aa10.9□□□□□ -0.66
NPLOC4-220ENST00000576940 HYIQ5T013 277 aa10.9□□□□□ -0.66
NPLOC4-220ENST00000576940 SCARA3Q6AZY7 606 aa10.9□□□□□ -0.66
NPLOC4-220ENST00000576940 TMEM92Q6UXU6 159 aa10.9□□□□□ -0.66
NPLOC4-220ENST00000576940 C11orf74Q86VG3 221 aa10.9□□□□□ -0.66
NPLOC4-220ENST00000576940 TMEFF1Q8IYR6 380 aa10.9□□□□□ -0.66
NPLOC4-220ENST00000576940 MYCT1Q8N699 235 aa10.9□□□□□ -0.66
NPLOC4-220ENST00000576940 ARL14EPQ8N8R7 260 aaPredicted RBP10.9□□□□□ -0.66
NPLOC4-220ENST00000576940 CNOT6LQ96LI5 555 aaKnown RBP10.9□□□□□ -0.66
NPLOC4-220ENST00000576940 FNBP1Q96RU3 617 aa10.9□□□□□ -0.66
NPLOC4-220ENST00000576940 FSCN3Q9NQT6 498 aa10.9□□□□□ -0.66
NPLOC4-220ENST00000576940 LARSQ9P2J5 1176 aaKnown RBP10.9□□□□□ -0.66
NPLOC4-220ENST00000576940 CIZ1Q9ULV3 898 aaPredicted RBP10.9□□□□□ -0.66
NPLOC4-220ENST00000576940 MSRB2Q9Y3D2 182 aa10.9□□□□□ -0.66
NPLOC4-220ENST00000576940 NEUROG3Q9Y4Z2 214 aa10.9□□□□□ -0.66
NPLOC4-220ENST00000576940 MYO16Q9Y6X6 1858 aa10.89□□□□□ -0.67
NPLOC4-220ENST00000576940 C2orf78A6NCI8 922 aa10.89□□□□□ -0.67
NPLOC4-220ENST00000576940 H0YCG3 227 aa10.89□□□□□ -0.67
NPLOC4-220ENST00000576940 K7ENM7 598 aa10.89□□□□□ -0.67
NPLOC4-220ENST00000576940 MAP3K13O43283 966 aa10.89□□□□□ -0.67
NPLOC4-220ENST00000576940 NOL4O94818 638 aa10.89□□□□□ -0.67
NPLOC4-220ENST00000576940 PIGRP01833 764 aa10.89□□□□□ -0.67
NPLOC4-220ENST00000576940 CKMP06732 381 aa10.89□□□□□ -0.67
NPLOC4-220ENST00000576940 USP17L7P0C7H9 530 aa10.89□□□□□ -0.67
NPLOC4-220ENST00000576940 ENGP17813 658 aa10.89□□□□□ -0.67
NPLOC4-220ENST00000576940 ACAT1P24752 427 aaKnown RBP10.89□□□□□ -0.67
NPLOC4-220ENST00000576940 SLC6A11P48066 632 aa10.89□□□□□ -0.67
NPLOC4-220ENST00000576940 FAM193AP78312 1265 aa10.89□□□□□ -0.67
NPLOC4-220ENST00000576940 SIM1P81133 766 aaPredicted RBP10.89□□□□□ -0.67
NPLOC4-220ENST00000576940 ZXDBP98169 803 aa10.89□□□□□ -0.67
NPLOC4-220ENST00000576940 NR1H3Q13133 447 aa10.89□□□□□ -0.67
NPLOC4-220ENST00000576940 CCDC142Q17RM4 750 aa10.89□□□□□ -0.67
NPLOC4-220ENST00000576940 EMC10Q5UCC4 262 aa10.89□□□□□ -0.67
NPLOC4-220ENST00000576940 SFTPA1Q8IWL2 248 aa10.89□□□□□ -0.67
NPLOC4-220ENST00000576940 CHCHD4Q8N4Q1 142 aa10.89□□□□□ -0.67
NPLOC4-220ENST00000576940 OLIG1Q8TAK6 271 aa10.89□□□□□ -0.67
NPLOC4-220ENST00000576940 SH3RF2Q8TEC5 729 aa10.89□□□□□ -0.67
NPLOC4-220ENST00000576940 ATP2A3Q93084 1043 aa10.89□□□□□ -0.67
NPLOC4-220ENST00000576940 IKZF4Q9H2S9 585 aa10.89□□□□□ -0.67
NPLOC4-220ENST00000576940 SLC32A1Q9H598 525 aa10.89□□□□□ -0.67
NPLOC4-220ENST00000576940 ASB7Q9H672 318 aa10.89□□□□□ -0.67
NPLOC4-220ENST00000576940 ZDHHC4Q9NPG8 344 aa10.89□□□□□ -0.67
NPLOC4-220ENST00000576940 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.89□□□□□ -0.67
NPLOC4-220ENST00000576940 GCNT4Q9P109 453 aa10.89□□□□□ -0.67
NPLOC4-220ENST00000576940 MBD1Q9UIS9 605 aaPredicted RBP10.89□□□□□ -0.67
NPLOC4-220ENST00000576940 GTF3C4Q9UKN8 822 aa10.89□□□□□ -0.67
NPLOC4-220ENST00000576940 DERAQ9Y315 318 aa10.89□□□□□ -0.67
NPLOC4-220ENST00000576940 NBEAQ8NFP9 2946 aa10.89□□□□□ -0.67
NPLOC4-220ENST00000576940 CACNA1EQ15878 2313 aa10.89□□□□□ -0.67
NPLOC4-220ENST00000576940 TSC2P49815 1807 aa10.88□□□□□ -0.67
NPLOC4-220ENST00000576940 ATXN2Q99700 1313 aaKnown RBP10.88□□□□□ -0.67
NPLOC4-220ENST00000576940 TRAV19A0A0A6YYK7 116 aa10.88□□□□□ -0.67
NPLOC4-220ENST00000576940 LAD1O00515 517 aa10.88□□□□□ -0.67
NPLOC4-220ENST00000576940 HCRTO43612 131 aa10.88□□□□□ -0.67
NPLOC4-220ENST00000576940 TRAK2O60296 914 aa10.88□□□□□ -0.67
NPLOC4-220ENST00000576940 OBSL1O75147 1896 aa10.88□□□□□ -0.67
NPLOC4-220ENST00000576940 HDCP19113 662 aa10.88□□□□□ -0.67
NPLOC4-220ENST00000576940 PRPHP41219 470 aa10.88□□□□□ -0.67
NPLOC4-220ENST00000576940 TSPY1Q01534 308 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms