RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 CLMPQ9H6B4 373 aa6.38□□□□□ -1.39
SMG6-219ENST00000575663 TRPC7Q9HCX4 862 aa6.38□□□□□ -1.39
SMG6-219ENST00000575663 PTPRHQ9HD43 1115 aa6.38□□□□□ -1.39
SMG6-219ENST00000575663 PCOLCE2Q9UKZ9 415 aa6.38□□□□□ -1.39
SMG6-219ENST00000575663 DSEQ9UL01 958 aa6.38□□□□□ -1.39
SMG6-219ENST00000575663 MAGED2Q9UNF1 606 aaPredicted RBP6.38□□□□□ -1.39
SMG6-219ENST00000575663 SDK1Q7Z5N4 2213 aa6.38□□□□□ -1.39
SMG6-219ENST00000575663 STK36Q9NRP7 1315 aa6.37□□□□□ -1.39
SMG6-219ENST00000575663 A0A087WWV3 80 aa6.37□□□□□ -1.39
SMG6-219ENST00000575663 TEX51A0A1B0GUA7 166 aa6.37□□□□□ -1.39
SMG6-219ENST00000575663 MYMKA6NI61 221 aa6.37□□□□□ -1.39
SMG6-219ENST00000575663 CYSRT1A8MQ03 144 aa6.37□□□□□ -1.39
SMG6-219ENST00000575663 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.37□□□□□ -1.39
SMG6-219ENST00000575663 K7EQS6 105 aa6.37□□□□□ -1.39
SMG6-219ENST00000575663 SGK1O00141 431 aa6.37□□□□□ -1.39
SMG6-219ENST00000575663 RRP8O43159 456 aaKnown RBP6.37□□□□□ -1.39
SMG6-219ENST00000575663 ARHGAP6O43182 974 aa6.37□□□□□ -1.39
SMG6-219ENST00000575663 ZNF217O75362 1048 aa6.37□□□□□ -1.39
SMG6-219ENST00000575663 GJB3O75712 270 aa6.37□□□□□ -1.39
SMG6-219ENST00000575663 CER1O95813 267 aa6.37□□□□□ -1.39
SMG6-219ENST00000575663 F11P03951 625 aa6.37□□□□□ -1.39
SMG6-219ENST00000575663 APODP05090 189 aa6.37□□□□□ -1.39
SMG6-219ENST00000575663 SPATA31C1P0DKV0 1188 aa6.37□□□□□ -1.39
SMG6-219ENST00000575663 CXCL8P10145 99 aa6.37□□□□□ -1.39
SMG6-219ENST00000575663 HLA-EP13747 358 aa6.37□□□□□ -1.39
SMG6-219ENST00000575663 PROZP22891 400 aa6.37□□□□□ -1.39
SMG6-219ENST00000575663 TIE1P35590 1138 aa6.37□□□□□ -1.39
SMG6-219ENST00000575663 KRT2P35908 639 aa6.37□□□□□ -1.39
SMG6-219ENST00000575663 OPRD1P41143 372 aa6.37□□□□□ -1.39
SMG6-219ENST00000575663 EIF2DP41214 584 aaKnown RBP6.37□□□□□ -1.39
SMG6-219ENST00000575663 STRN3Q13033 797 aa6.37□□□□□ -1.39
SMG6-219ENST00000575663 KCNB1Q14721 858 aa6.37□□□□□ -1.39
SMG6-219ENST00000575663 WDR45BQ5MNZ6 344 aa6.37□□□□□ -1.39
SMG6-219ENST00000575663 METTL23Q86XA0 190 aa6.37□□□□□ -1.39
SMG6-219ENST00000575663 CATSPER3Q86XQ3 398 aa6.37□□□□□ -1.39
SMG6-219ENST00000575663 DCP1BQ8IZD4 617 aaKnown RBP6.37□□□□□ -1.39
SMG6-219ENST00000575663 THEM5Q8N1Q8 247 aa6.37□□□□□ -1.39
SMG6-219ENST00000575663 FRMD1Q8N878 549 aa6.37□□□□□ -1.39
SMG6-219ENST00000575663 PDCD7Q8N8D1 485 aaKnown RBP6.37□□□□□ -1.39
SMG6-219ENST00000575663 FSIP1Q8NA03 581 aa6.37□□□□□ -1.39
SMG6-219ENST00000575663 IL17RCQ8NAC3 791 aa6.37□□□□□ -1.39
SMG6-219ENST00000575663 OR10T2Q8NGX3 314 aa6.37□□□□□ -1.39
SMG6-219ENST00000575663 SETD7Q8WTS6 366 aaKnown RBP6.37□□□□□ -1.39
SMG6-219ENST00000575663 FOXJ1Q92949 421 aa6.37□□□□□ -1.39
SMG6-219ENST00000575663 NXPE2Q96DL1 559 aa6.37□□□□□ -1.39
SMG6-219ENST00000575663 HSPA12BQ96MM6 686 aa6.37□□□□□ -1.39
SMG6-219ENST00000575663 CDC6Q99741 560 aa6.37□□□□□ -1.39
SMG6-219ENST00000575663 TARS2Q9BW92 718 aaKnown RBP6.37□□□□□ -1.39
SMG6-219ENST00000575663 ZCWPW1Q9H0M4 648 aa6.37□□□□□ -1.39
SMG6-219ENST00000575663 TMEM134Q9H6X4 195 aa6.37□□□□□ -1.39
SMG6-219ENST00000575663 PLEKHA5Q9HAU0 1116 aa6.37□□□□□ -1.39
SMG6-219ENST00000575663 ABI2Q9NYB9 513 aaPredicted RBP6.37□□□□□ -1.39
SMG6-219ENST00000575663 EML5Q05BV3 1969 aa6.37□□□□□ -1.39
SMG6-219ENST00000575663 KIF26AQ9ULI4 1882 aaPredicted RBP6.36□□□□□ -1.39
SMG6-219ENST00000575663 MAST4O15021 2626 aa6.36□□□□□ -1.39
SMG6-219ENST00000575663 IGSF10Q6WRI0 2623 aa6.36□□□□□ -1.39
SMG6-219ENST00000575663 BPTFQ12830 3046 aa6.36□□□□□ -1.39
SMG6-219ENST00000575663 TRABD2BA6NFA1 517 aa6.36□□□□□ -1.39
SMG6-219ENST00000575663 FLRT2O43155 660 aa6.36□□□□□ -1.39
SMG6-219ENST00000575663 CBFA2T3O75081 653 aa6.36□□□□□ -1.39
SMG6-219ENST00000575663 MED24O75448 989 aa6.36□□□□□ -1.39
SMG6-219ENST00000575663 TOM1L1O75674 476 aa6.36□□□□□ -1.39
SMG6-219ENST00000575663 KAT7O95251 611 aa6.36□□□□□ -1.39
SMG6-219ENST00000575663 CYP11A1P05108 521 aa6.36□□□□□ -1.39
SMG6-219ENST00000575663 HAPLN1P10915 354 aaPredicted RBP6.36□□□□□ -1.39
SMG6-219ENST00000575663 TCF3P15923 654 aa6.36□□□□□ -1.39
SMG6-219ENST00000575663 MUTP22033 750 aa6.36□□□□□ -1.39
SMG6-219ENST00000575663 MATR3P43243 847 aaKnown RBP eCLIP6.36□□□□□ -1.39
SMG6-219ENST00000575663 NPTX2P47972 431 aa6.36□□□□□ -1.39
SMG6-219ENST00000575663 PEX3P56589 373 aa6.36□□□□□ -1.39
SMG6-219ENST00000575663 EVCP57679 992 aa6.36□□□□□ -1.39
SMG6-219ENST00000575663 TSPY1Q01534 308 aa6.36□□□□□ -1.39
SMG6-219ENST00000575663 CFHR1Q03591 330 aa6.36□□□□□ -1.39
SMG6-219ENST00000575663 GRIK2Q13002 908 aa6.36□□□□□ -1.39
SMG6-219ENST00000575663 RESTQ13127 1097 aa6.36□□□□□ -1.39
SMG6-219ENST00000575663 KYAT1Q16773 422 aa6.36□□□□□ -1.39
SMG6-219ENST00000575663 SLC10A6Q3KNW5 377 aa6.36□□□□□ -1.39
SMG6-219ENST00000575663 GLIPR1L2Q4G1C9 344 aa6.36□□□□□ -1.39
SMG6-219ENST00000575663 PREPLQ4J6C6 727 aaPredicted RBP6.36□□□□□ -1.39
SMG6-219ENST00000575663 IL27RAQ6UWB1 636 aa6.36□□□□□ -1.39
SMG6-219ENST00000575663 NUDT18Q6ZVK8 323 aa6.36□□□□□ -1.39
SMG6-219ENST00000575663 TMEM150AQ86TG1 271 aa6.36□□□□□ -1.39
SMG6-219ENST00000575663 SLCO6A1Q86UG4 719 aa6.36□□□□□ -1.39
SMG6-219ENST00000575663 LURAP1LQ8IV03 231 aa6.36□□□□□ -1.39
SMG6-219ENST00000575663 DEFB119Q8N690 84 aa6.36□□□□□ -1.39
SMG6-219ENST00000575663 KRI1Q8N9T8 703 aaKnown RBP6.36□□□□□ -1.39
SMG6-219ENST00000575663 TRIML1Q8N9V2 468 aa6.36□□□□□ -1.39
SMG6-219ENST00000575663 OXER1Q8TDS5 423 aa6.36□□□□□ -1.39
SMG6-219ENST00000575663 SH3RF2Q8TEC5 729 aa6.36□□□□□ -1.39
SMG6-219ENST00000575663 WASF1Q92558 559 aa6.36□□□□□ -1.39
SMG6-219ENST00000575663 BAP1Q92560 729 aa6.36□□□□□ -1.39
SMG6-219ENST00000575663 SENP8Q96LD8 212 aa6.36□□□□□ -1.39
SMG6-219ENST00000575663 TSPAN18Q96SJ8 248 aa6.36□□□□□ -1.39
SMG6-219ENST00000575663 PNKPQ96T60 521 aa6.36□□□□□ -1.39
SMG6-219ENST00000575663 PRORYQ9H606 182 aa6.36□□□□□ -1.39
SMG6-219ENST00000575663 KMT5AQ9NQR1 393 aa6.36□□□□□ -1.39
SMG6-219ENST00000575663 CALCOCO1Q9P1Z2 691 aa6.36□□□□□ -1.39
SMG6-219ENST00000575663 ARHGAP28Q9P2N2 729 aa6.36□□□□□ -1.39
SMG6-219ENST00000575663 RBM19Q9Y4C8 960 aaKnown RBP6.36□□□□□ -1.39
SMG6-219ENST00000575663 PCDHB5Q9Y5E4 795 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms