RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 WEE2P0C1S8 567 aa11.75□□□□□ -0.53
CHD3-216ENST00000573936 AVPR2P30518 371 aa11.75□□□□□ -0.53
CHD3-216ENST00000573936 MAGEA11P43364 429 aa11.75□□□□□ -0.53
CHD3-216ENST00000573936 RAP1GAPP47736 663 aa11.75□□□□□ -0.53
CHD3-216ENST00000573936 NDST1P52848 882 aa11.75□□□□□ -0.53
CHD3-216ENST00000573936 RPL10AP62906 217 aaKnown RBP11.75□□□□□ -0.53
CHD3-216ENST00000573936 FOXK2Q01167 660 aa11.75□□□□□ -0.53
CHD3-216ENST00000573936 INCA1Q0VD86 236 aa11.75□□□□□ -0.53
CHD3-216ENST00000573936 TWF1Q12792 350 aa11.75□□□□□ -0.53
CHD3-216ENST00000573936 TCF15Q12870 199 aa11.75□□□□□ -0.53
CHD3-216ENST00000573936 VEPH1Q14D04 833 aa11.75□□□□□ -0.53
CHD3-216ENST00000573936 CFAP221Q4G0U5 840 aa11.75□□□□□ -0.53
CHD3-216ENST00000573936 ANO6Q4KMQ2 910 aa11.75□□□□□ -0.53
CHD3-216ENST00000573936 VWA3BQ502W6 1294 aa11.75□□□□□ -0.53
CHD3-216ENST00000573936 TCP11X2Q5H9J9 407 aa11.75□□□□□ -0.53
CHD3-216ENST00000573936 GBP6Q6ZN66 633 aa11.75□□□□□ -0.53
CHD3-216ENST00000573936 ITIH5Q86UX2 942 aa11.75□□□□□ -0.53
CHD3-216ENST00000573936 CRYBG2Q8N1P7 616 aa11.75□□□□□ -0.53
CHD3-216ENST00000573936 LEMD2Q8NC56 503 aa11.75□□□□□ -0.53
CHD3-216ENST00000573936 B3GALNT2Q8NCR0 500 aa11.75□□□□□ -0.53
CHD3-216ENST00000573936 MYCBPAPQ8TBZ2 947 aa11.75□□□□□ -0.53
CHD3-216ENST00000573936 TATDN2Q93075 761 aa11.75□□□□□ -0.53
CHD3-216ENST00000573936 FAM81BQ96LP2 452 aa11.75□□□□□ -0.53
CHD3-216ENST00000573936 PKMYT1Q99640 499 aa11.75□□□□□ -0.53
CHD3-216ENST00000573936 SEPT5Q99719 369 aaPredicted RBP11.75□□□□□ -0.53
CHD3-216ENST00000573936 SDCBP2Q9H190 292 aa11.75□□□□□ -0.53
CHD3-216ENST00000573936 POMKQ9H5K3 350 aa11.75□□□□□ -0.53
CHD3-216ENST00000573936 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.75□□□□□ -0.53
CHD3-216ENST00000573936 SAMSN1Q9NSI8 373 aaKnown RBP11.75□□□□□ -0.53
CHD3-216ENST00000573936 TMLHEQ9NVH6 421 aa11.75□□□□□ -0.53
CHD3-216ENST00000573936 FAM86C1Q9NVL1 165 aa11.75□□□□□ -0.53
CHD3-216ENST00000573936 CDH22Q9UJ99 828 aa11.75□□□□□ -0.53
CHD3-216ENST00000573936 SLC27A5Q9Y2P5 690 aa11.75□□□□□ -0.53
CHD3-216ENST00000573936 YIPF1Q9Y548 306 aa11.75□□□□□ -0.53
CHD3-216ENST00000573936 ATP8B3O60423 1300 aa11.75□□□□□ -0.53
CHD3-216ENST00000573936 CACNA1AO00555 2505 aa11.75□□□□□ -0.53
CHD3-216ENST00000573936 TSC2P49815 1807 aa11.74□□□□□ -0.53
CHD3-216ENST00000573936 KMT2EQ8IZD2 1858 aa11.74□□□□□ -0.53
CHD3-216ENST00000573936 MTCL1Q9Y4B5 1905 aaKnown RBP11.74□□□□□ -0.53
CHD3-216ENST00000573936 SYCE3A1L190 88 aa11.74□□□□□ -0.53
CHD3-216ENST00000573936 ZNF197O14709 1029 aa11.74□□□□□ -0.53
CHD3-216ENST00000573936 ATP2C2O75185 946 aa11.74□□□□□ -0.53
CHD3-216ENST00000573936 CILPO75339 1184 aa11.74□□□□□ -0.53
CHD3-216ENST00000573936 FGF19O95750 216 aa11.74□□□□□ -0.53
CHD3-216ENST00000573936 CDK11BP21127 795 aaKnown RBP11.74□□□□□ -0.53
CHD3-216ENST00000573936 PSMC1P62191 440 aaKnown RBP11.74□□□□□ -0.53
CHD3-216ENST00000573936 CYP27A1Q02318 531 aa11.74□□□□□ -0.53
CHD3-216ENST00000573936 CUL2Q13617 745 aa11.74□□□□□ -0.53
CHD3-216ENST00000573936 MDH1BQ5I0G3 518 aa11.74□□□□□ -0.53
CHD3-216ENST00000573936 CDKAL1Q5VV42 579 aa11.74□□□□□ -0.53
CHD3-216ENST00000573936 VSTM1Q6UX27 236 aa11.74□□□□□ -0.53
CHD3-216ENST00000573936 GRASPQ7Z6J2 395 aaPredicted RBP11.74□□□□□ -0.53
CHD3-216ENST00000573936 PLCD3Q8N3E9 789 aa11.74□□□□□ -0.53
CHD3-216ENST00000573936 LMO3Q8TAP4 145 aa11.74□□□□□ -0.53
CHD3-216ENST00000573936 ELMO3Q96BJ8 720 aa11.74□□□□□ -0.53
CHD3-216ENST00000573936 ACSF2Q96CM8 615 aaPredicted RBP11.74□□□□□ -0.53
CHD3-216ENST00000573936 CEP295NLQ96MC4 621 aa11.74□□□□□ -0.53
CHD3-216ENST00000573936 FUCA2Q9BTY2 467 aa11.74□□□□□ -0.53
CHD3-216ENST00000573936 NT5C1AQ9BXI3 368 aa11.74□□□□□ -0.53
CHD3-216ENST00000573936 NDST4Q9H3R1 872 aa11.74□□□□□ -0.53
CHD3-216ENST00000573936 CRTAC1Q9NQ79 661 aa11.74□□□□□ -0.53
CHD3-216ENST00000573936 AVENQ9NQS1 362 aaPredicted RBP11.74□□□□□ -0.53
CHD3-216ENST00000573936 FANCLQ9NW38 375 aa11.74□□□□□ -0.53
CHD3-216ENST00000573936 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.74□□□□□ -0.53
CHD3-216ENST00000573936 DNMT3BQ9UBC3 853 aaKnown RBP11.74□□□□□ -0.53
CHD3-216ENST00000573936 USTQ9Y2C2 406 aa11.74□□□□□ -0.53
CHD3-216ENST00000573936 ZFHX2Q9C0A1 2572 aaPredicted RBP11.74□□□□□ -0.53
CHD3-216ENST00000573936 CLUHO75153 1309 aa11.74□□□□□ -0.53
CHD3-216ENST00000573936 BECN2A8MW95 431 aa11.73□□□□□ -0.53
CHD3-216ENST00000573936 H0Y858 1186 aa11.73□□□□□ -0.53
CHD3-216ENST00000573936 PES1O00541 588 aaKnown RBP11.73□□□□□ -0.53
CHD3-216ENST00000573936 TRIM66O15016 1216 aa11.73□□□□□ -0.53
CHD3-216ENST00000573936 HCRTO43612 131 aa11.73□□□□□ -0.53
CHD3-216ENST00000573936 LRRN2O75325 713 aa11.73□□□□□ -0.53
CHD3-216ENST00000573936 MICAL2O94851 1124 aa11.73□□□□□ -0.53
CHD3-216ENST00000573936 CSH1P0DML2 217 aa11.73□□□□□ -0.53
CHD3-216ENST00000573936 CSH2P0DML3 217 aa11.73□□□□□ -0.53
CHD3-216ENST00000573936 CD58P19256 250 aa11.73□□□□□ -0.53
CHD3-216ENST00000573936 FSHRP23945 695 aa11.73□□□□□ -0.53
CHD3-216ENST00000573936 ZNF165P49910 485 aa11.73□□□□□ -0.53
CHD3-216ENST00000573936 NUBP1P53384 320 aa11.73□□□□□ -0.53
CHD3-216ENST00000573936 TPM4P67936 248 aa11.73□□□□□ -0.53
CHD3-216ENST00000573936 GCNT1Q02742 428 aa11.73□□□□□ -0.53
CHD3-216ENST00000573936 LRMPQ12912 555 aa11.73□□□□□ -0.53
CHD3-216ENST00000573936 TAF12Q16514 161 aa11.73□□□□□ -0.53
CHD3-216ENST00000573936 EXOC3L4Q17RC7 722 aa11.73□□□□□ -0.53
CHD3-216ENST00000573936 PABPC1LQ4VXU2 614 aaKnown RBP11.73□□□□□ -0.53
CHD3-216ENST00000573936 HSP90AA4PQ58FG1 418 aa11.73□□□□□ -0.53
CHD3-216ENST00000573936 CYP4A22Q5TCH4 519 aa11.73□□□□□ -0.53
CHD3-216ENST00000573936 SMYD5Q6GMV2 418 aa11.73□□□□□ -0.53
CHD3-216ENST00000573936 ENOSF1Q7L5Y1 443 aa11.73□□□□□ -0.53
CHD3-216ENST00000573936 OTOP3Q7RTS5 596 aa11.73□□□□□ -0.53
CHD3-216ENST00000573936 ACOT1Q86TX2 421 aa11.73□□□□□ -0.53
CHD3-216ENST00000573936 PPM1KQ8N3J5 372 aa11.73□□□□□ -0.53
CHD3-216ENST00000573936 AOPEPQ8N6M6 819 aa11.73□□□□□ -0.53
CHD3-216ENST00000573936 FAM200AQ8TCP9 573 aa11.73□□□□□ -0.53
CHD3-216ENST00000573936 PSMG2Q969U7 264 aa11.73□□□□□ -0.53
CHD3-216ENST00000573936 MYLPFQ96A32 169 aa11.73□□□□□ -0.53
CHD3-216ENST00000573936 JAKMIP2Q96AA8 810 aa11.73□□□□□ -0.53
CHD3-216ENST00000573936 PCED1BQ96HM7 432 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms